Basic Information

Insect: Macrocentrus cingulum
Gene Symbol: -
Assembly: GCA_002156465.1
Location: MVJL01011760.1:80338-88767[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 5.8e-05 0.0079 16.7 1.4 1 23 473 495 473 495 0.96

2 18 1.2e-05 0.0017 18.8 1.9 1 20 501 520 501 523 0.94

3 18 1.9e-05 0.0026 18.2 0.7 1 23 529 551 529 551 0.98

4 18 4.7e-05 0.0064 17.0 4.4 1 21 557 577 557 579 0.95

5 18 1.5e-05 0.002 18.6 4.6 1 23 585 607 585 607 0.99

6 18 1.5e-05 0.002 18.6 5.3 1 23 613 635 613 635 0.97

7 18 5.6e-06 0.00076 19.9 7.1 1 23 641 663 641 663 0.97

8 18 5.4e-08 7.4e-06 26.2 2.7 1 23 669 691 669 691 0.98

9 18 4e-05 0.0055 17.2 6.7 1 23 697 719 697 719 0.97

10 18 1.2e-05 0.0017 18.8 5.8 1 23 725 747 725 747 0.98

11 18 3.3e-07 4.5e-05 23.8 2.9 1 23 753 775 753 775 0.98

12 18 4.9e-06 0.00067 20.1 7.8 1 23 781 803 781 803 0.98

13 18 1.5e-05 0.0021 18.5 9.1 1 23 809 831 809 831 0.98

14 18 2e-05 0.0028 18.1 7.5 1 23 837 859 837 859 0.98

15 18 0.00097 0.13 12.9 8.8 1 21 865 885 865 887 0.94

16 18 7.4e-06 0.001 19.5 0.4 1 23 893 915 893 915 0.98

17 18 0.018 2.4 8.9 4.5 1 23 925 947 925 947 0.98

18 18 2.9e-07 3.9e-05 24.0 1.3 1 23 953 975 953 975 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	5.8e-05	0.0079	16.7	1.4	1	23	473	495	473	495	0.96
2	18	1.2e-05	0.0017	18.8	1.9	1	20	501	520	501	523	0.94
3	18	1.9e-05	0.0026	18.2	0.7	1	23	529	551	529	551	0.98
4	18	4.7e-05	0.0064	17.0	4.4	1	21	557	577	557	579	0.95
5	18	1.5e-05	0.002	18.6	4.6	1	23	585	607	585	607	0.99
6	18	1.5e-05	0.002	18.6	5.3	1	23	613	635	613	635	0.97
7	18	5.6e-06	0.00076	19.9	7.1	1	23	641	663	641	663	0.97
8	18	5.4e-08	7.4e-06	26.2	2.7	1	23	669	691	669	691	0.98
9	18	4e-05	0.0055	17.2	6.7	1	23	697	719	697	719	0.97
10	18	1.2e-05	0.0017	18.8	5.8	1	23	725	747	725	747	0.98
11	18	3.3e-07	4.5e-05	23.8	2.9	1	23	753	775	753	775	0.98
12	18	4.9e-06	0.00067	20.1	7.8	1	23	781	803	781	803	0.98
13	18	1.5e-05	0.0021	18.5	9.1	1	23	809	831	809	831	0.98
14	18	2e-05	0.0028	18.1	7.5	1	23	837	859	837	859	0.98
15	18	0.00097	0.13	12.9	8.8	1	21	865	885	865	887	0.94
16	18	7.4e-06	0.001	19.5	0.4	1	23	893	915	893	915	0.98
17	18	0.018	2.4	8.9	4.5	1	23	925	947	925	947	0.98
18	18	2.9e-07	3.9e-05	24.0	1.3	1	23	953	975	953	975	0.97

Sequence Information

Coding Sequence: ATGAATAGTGAACAGCATGCTCTGCCAGCGACTACGCAGGCACAGCAAGAGGATGTAAACGCGGGTCAAAGCGGTCGTCCTTCTTACCCGGGTGGTTTGGCTACTGCCACGAGTGTCGGGAATGTAGGAAGTACAGTGCCGCATTCGTCCGCGGACCTGCGTGTAGGTACAGCCGTAGCGTTAGCTTCCTCGGTAGCTAAGTATTGGGTCCTCACCAATCTGTTTCCCGGACCGCTACCCCAGGTCTCGGTGTATCACCATCCCCATCACAATTCCTCGCACAGAAGCGCAACCGGTGAAGCCACTTCCAAAGAGCCAGGCTCCTCATTGTCGCAGGACATGGCGTTGGCAACAGGCTCGCACCACCAGGGTGCATCATctcagcaacaacaacaacaacaacaacaacaacaacaacagcagcagcagcagcagcagcagcagcaacagcatcATCACCATCAGCCAGCTGTTAGCAGCAGTGGCCACCACAGCGCCCTGCAGTCCACTGCGCAGaTTCCCGTATCTCTTCCTGGTCTGACTCTGGACGGTACCCACATACCAACGAGTCATCTGCAGGCTGCTCACGCTCAAATGCAGCAGCAAATGCAGTCCCAGCAGcatcaacagcagcaacaattACATCAagcgcagcagcagcagtctCACCACCAGATGCAGGCACATCAAAATCCCCAAAATGCCGGTCCAAACTCGCAAAATCAGCCTGGCCAGAGGGACGAAAATAAAGTGAAAGATGAGGGTAGTTGCACTACCGAGCGCTGCAGTGATAGCCAGGTGCATTGTCAAGTTCAGTGCGACTTGCAACTGCAGCAACCGCAAGATTTGCAGGCGACCCTGttgcagcaacagcagcagcagcaacaacaacaacaacaacaacaacaacaacaacaacaacaacagcagatGGGAGTAAATTTGGGCGGAAGCTCGGGTGCAGACAATACCAatcaaaataatcaagataaaccagaaaaagaaaaagaactTCGTCAACTGAATATGAGCcaatTTCAAGTGCCAGATTTGAAGCCTGGAGGACACATGATGGATGTGAGAACTGCTGACGGTTCAGTGGTGAAAATCAGCGCGGGCAATGAGCAAGATTTGGCGAAAACATTGGGCGTTGAGTTGGTACAGAATATATATAAGCAGGTAAATGTGGAAGATATTAATCAGCTGTTGGCGTACCACGAGGTTTTTGGCAAACTTCAGAGTGAAATAGCAGCTGGAACGACGCTCGTAGGTGGCACAGTGCCCACGCAAACTGTAACAACCATACAAAATGGCACTCCTCTAGTTCAACAAGTTCAACTGAATAAATTTGACATAAAAACGAGCGATGGAGAGGCAACACCGGGACCGAGTGCCTCGCCAGTTTCAGTTGGCAGTCATGCGTGCGAAGTTTGCGgaaaaatctttcaatttcGCTATCAGTTGATTGTCCATCGACGCTATCACACCGAGAGAAAGCCATTTACGTGTCAGGTGTGTGGTAAAGCATTTACCAATGCCAACGACTTGACTCGCCACGGTAAATGTCACCTCGGTGGCTCCATGTTCACCTGTGCCGTGTGCTTCCACGTGTTTGCCAATGCTCCATCCTTAGAGCGTCACATGAAGCGCCATGCCACCGATAAACCGTACAACTGCACTGTTTGCGGCAAGAGTTTTGCGCGAAAAGAACATCTGGACAATCACACACGTTGTCACACTGGTGAAACGCCTTACAGGTGTCAATATTGCGCAAAAACTTTCACGCGCAAGGAACACATGGTAAATCATGTGAGAAAACATACTGGAGAAACGCCACATCGTTGTGATATCTGCAAAAAGAGTTTTACTCGTAAAGAACACTTTATGAATCATGTCATGTGGCACACTGGTGAGACACCGCATCATTGTCAGGTTTGCGGGAAAAAATACACTCGCAAAGAACATTTGGCAAATCATATGCGCTCACACACCAATGATACGCCTTTCCGCTGTGAAATATGTGGTAAGTCATTCACGAGGAAAGAGCACTTCACGAACCACATAATGTGGCATACGGGCGAGACACCGCATCGCTGTGACTTCTGCTCAAAGACCTTCACACGAAAGGAGCATCTTTTAAACCACGTACGACAGCACACGGGTGAGTCTCCACATCGATGCGGCTTCTGCTCCAAATCGTTCACCAGAAAGGAACACCTAGTTAACCACATTCGCCAACACACAGGTGAAACACCCTTCCGTTGTCAGTACTGTCCGAAAGCGTTTACACGGAAGGATCACCTGGTGAACCACGTGAGGCAGCACACGGGTGAGTCACCGCACAAGTGCCAGTATTGCACCAAATCGTTCACGCGGAAGGAACATTTGACAAATCACGTGCGTCAACATACAGGCGAATCGCCACATCGATGTCACTTCTGCTCCAAGTCATTTACGCGTAAGGAGCACTTGACGAATCATGTACGAATTCATACTGGCGAATCGCCACACAGATGTGAGTTTTGTCAAAGGACTTTTACCCGCAAGGAGCATCTTAATAATCATCTACGACAGCACACGGGAGATTCTTCACATTGCTGCAACGTTTGCTCCAAGCCTTTTACAAGAAAGGAACATCTGGTTAATCACATGCGCTGTCACACGGGCGAGCGTCCATTTGTTTGCACCGAGTGTGGCAAGAGTTTCCCGCTAAAGGGCAATTTGCTTTTCCACATGCGATCACACAACAAGGGTTCCAACGCCGAGCGGCCGTTCCGCTGTGACCTCTGCCCCAAGGACTTTATGTGCAAAGGTCATCTGGTGTCGCACAGACGCTCGCACTCGGACGAGCGCCCGCACAGCTGTCCGGATTGCGGCAAGACCTTTGTGGAAAAGGGCAATATGCTGAGACACTTGCGAAAACACGCGGCCGAGGGCCCGCCCACACAAGTCACCACGGCTTCGGCGATACCGCAACCCGGTGTATTGCCCATACCCGCGTCTGCTGCTGTGCTAGTTGGACATCCCCTGGCACCACCGGCTCCATCAGTTGTTCCTCAACACACTGTGGTTGTACCTACGCCGCCGGGCGTTCTCACATCTTACTAA
Protein Sequence: MNSEQHALPATTQAQQEDVNAGQSGRPSYPGGLATATSVGNVGSTVPHSSADLRVGTAVALASSVAKYWVLTNLFPGPLPQVSVYHHPHHNSSHRSATGEATSKEPGSSLSQDMALATGSHHQGASSQQQQQQQQQQQQQQQQQQQQQQQHHHHQPAVSSSGHHSALQSTAQIPVSLPGLTLDGTHIPTSHLQAAHAQMQQQMQSQQHQQQQQLHQAQQQQSHHQMQAHQNPQNAGPNSQNQPGQRDENKVKDEGSCTTERCSDSQVHCQVQCDLQLQQPQDLQATLLQQQQQQQQQQQQQQQQQQQQQQMGVNLGGSSGADNTNQNNQDKPEKEKELRQLNMSQFQVPDLKPGGHMMDVRTADGSVVKISAGNEQDLAKTLGVELVQNIYKQVNVEDINQLLAYHEVFGKLQSEIAAGTTLVGGTVPTQTVTTIQNGTPLVQQVQLNKFDIKTSDGEATPGPSASPVSVGSHACEVCGKIFQFRYQLIVHRRYHTERKPFTCQVCGKAFTNANDLTRHGKCHLGGSMFTCAVCFHVFANAPSLERHMKRHATDKPYNCTVCGKSFARKEHLDNHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLVNHIRQHTGETPFRCQYCPKAFTRKDHLVNHVRQHTGESPHKCQYCTKSFTRKEHLTNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQRTFTRKEHLNNHLRQHTGDSSHCCNVCSKPFTRKEHLVNHMRCHTGERPFVCTECGKSFPLKGNLLFHMRSHNKGSNAERPFRCDLCPKDFMCKGHLVSHRRSHSDERPHSCPDCGKTFVEKGNMLRHLRKHAAEGPPTQVTTASAIPQPGVLPIPASAAVLVGHPLAPPAPSVVPQHTVVVPTPPGVLTSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00899003;
90% Identity: iTF_00997203;
80% Identity: -