Basic Information

Gene Symbol
ct
Assembly
GCA_002156465.1
Location
MVJL01010334.1:1648-45412[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.17 1.7e+03 -0.8 0.2 9 50 252 293 250 298 0.86
2 4 5.4e-28 5.2e-24 84.2 0.0 2 72 456 527 455 532 0.95
3 4 1.2e-32 1.1e-28 99.1 0.0 3 77 859 934 857 936 0.96
4 4 6.2e-31 6e-27 93.6 0.1 3 75 1079 1152 1077 1156 0.95

Sequence Information

Coding Sequence
atgcttgaaagCAATTTGTTAGCGATATATCGTATGGGCATtgaaaacAGGGCGACATTGGCGGAGAAAGAGGTGTCGGCACTGAAAGAAAAACTTGCCAATTCCAAGACTGAGGGGCAACACGCGCCCCAGAATGTACAGAGCACAGAACCGAGTCAGGAACAAACGAGTAATCCAAGAAGAACACCGAACAGTAACTTGGAACATGAGCTACAGGCCAAAGATAaagagATTAGCCAACTGGTTGAGGAAGTGTCCAGGCTACAGCAGAGTCTACAACGGCTGCAGGAGACGAGCGCACAGACAACAGCACGCCTCGAGGAGGAGCTGGAGTCGCGTCGCCAACACATCAACCGACTCGAAAGCAAACTTGACCGTCAGAGAGACTATGACGACCTCAAGCGCGAGATCAGTGTCCTCAGATCGGTCGATTTGTCTCAAATACCTACGAACGAGCCCGGCAAGAGTCTCGAACACCTGCTGATGGAAAGGACAAAGGCCCTGCAACAAGCAGAGAGCCTCAAACCTCCCAGCACACCTGACACCCTTGGTGGACTAGCGTCACCCCTGCAGCGAGCCGCTACCGCGTCGCCGGGCGGTGGAAGCACCCCCGCGTCCACTTCCCAACAAGCAATCCCATCGCGATCCACCCCGACGCCCTCGTCGGTCACCTCCTCGAACCCCGCTGCCACGAACCTCCTCTTCCCGCCGCCGCTGCAGAACGTCGAGACGTTCGGGTCATTTCTGGGCGAAGAAATTGTCGCCAATTGGCGGCGCTCGCTTGAACGCTCAATAATCAGTCAGCACCAGCAGAATCAGCCTCAGTGTTCGCAGTCGCAAACAAATCTGCAGTCTTCAATGCACCCACCAACGCCGACAGCGAGCCTGAACCACTTACCATCACCAACGGACCTGCCAGCCAAGTCCTGCACACCTCTAGGAGGCTCCCAAGACTCGGCTGACAAGTCTCCAACGCCAATACCAAGCACAGACCCACCAGCACCACAAACGCCATCGTCCACGGCGCTCACGTCACCTCCAACCAGTCTACCGATGATGGAGGCAGGTGGAATTAACGGAGCTGCGCTGGCCATCATGCCCAGGGTGAAGAGTCCAGTGCAGGAGGAGTCCTGCAACAACAATAGCCATCATTTAGTCAACAACAACACAATCGGAGGTCTGAGCGTGTTGGACAGTTTGAAAAGTCCGTTCCGCTTCGATGATCGAACTCATCCGTTCCGATTTGGAGATGAATTCGGGGCTGCTGGCATGGCCGGCAGACTTGGCGAGTCTCTAATACCCAAGGGCGATCCTATGGAGGCTCGTCTGCAAGAAATGCTACGGTACAACATGGACAAGTACGCCTCACAGAACCTGGACACGCTTCATATTGCGAGAAGGGTACGAGAACTGCTGTCCATTCACAATATTGGCCAGAGATTGTTCGCGAAATATGTTCTGGGACTGAGCCAGGGCACTGTTAGTGAACTCCTGAGCAAACCCAAGCCTTGGGACAAGCTGACGGAGAAGGGTCGTGATAGCTATCGCAAGATGCACGGCTGGGCGTGTGATGAAAATGCCGTGATGCTGCTTAAATCGCTAATACCGAAGAAAGGCAAGGAGCAGGGTTTGCCGGCGTTTGCACGCGGCCCCCAGGACGGAGCACCGCCAGACATGAATGACGAACGAATCGCTCACATTCTCGGCGAGTCTGGACACCTGCACATGAGCCACGACACCTCCAACGACGGTGACAGCAAGAGCCCGAGTCGCTTGGGCTGTCCGAGTCCGTTTGGCAAGGACAGGTACGACAGTGCGTCGAAGCGgttgaaaaaatacgagaACGACGACATTCCCCAGGAAAAAGTAGTGAGGATTTATCAGGAAGAACTCGCCAAACTCATGGGCAGACGTGGTGATGAGATTCGAGGCCCCAGAGATTATCCTGCAAGCGCGATGTTTCCGCACTTTTTCAGCGGCGGCCAAAGCATGCACGGGATGGAGCGCACGCAGGAGGAGATCCGCATAGCCCTGGACGCCTATCACCGTGAGCTGCAAAAACTCAACTCGACTCCAAGTCAAAATGCAGCGCTAGCAGGCCTACCAAGTCTGCCAAACCTTCCGGGACTACTGGCGCTGCATCAACAGGCCCTACATCAAAACCACATGTCAGCAAATGGCGGCGGGGTGCAAGACCTATCCCTGGGCAAGGTGGATCCACGGAGTAAAATCATGAACGGCGTCTCTGAGgaggagaaagaaaaaatggaagaaGCAATGAGACACGCAGGCAGTGCCTTCTCCCTGGTCCGACCGAAGCAGGAGCCAACGGGTGCGCAATCAACTCCGGGTGGTTCTAGCGCCAGTTCACCCCTGGGAAACTCAATTCTCCCACCTGCCATGGCACCAAACGAGGATTTTACCGGTGCCGCGGCGGCCAGTCCGCTCCAACGAATGGCCTCCATCACCAACAGCCTGATAAGCCAACCGTCCACGCCGACGCATCACTCATCCACTCAGAGGCCTCTGAAGGCCGTTCTTCCGCCTATAACCCAGCAGCAATTTGACCTGTACAACAACCTCAACACCGAGGACATCGTGAAGAGGGTGAAGGAGCAACTGTCGCAGTACTCAATTTCCCAACGGCTCTTTGGAGAATCTGTGCTCGGGCTGTCGCAGGGATCCGTGTCAGATCTGCTGGCTAGGCCCAAACCCTGGCACATGCTGACGCAAAAAGGCCGGGAACCCTTTATACggatgaaaatgtttttggAGGATGAGCAGGCGGTGCATAAACTTGTTGCCAGTCAGTATAAAATCGCGCCGGAGAAGCTGATGAGGACCGGCGGCTACGGCGGCCTGCCTCCCTGTGGCACGCCGATGAAGCCAATGCCACCGACAAAACTCGTCCAGGAGCAGCTGCAGAATGCGGCCAAGGTCCAGGCTGCGGCACAGGCAGCAGCGCAAGCAGCCGCCCAACACCAGCAAGAGAGTTCGATGCAGTTGGGACCTCCACAGCCAAGTCCACAACACCCTCAGCATCCACCAGCAGCCATGATGCTCACTCCACCTGGCGGACATCATCCGCTGAGTCAGCTGAGTATTCAGGACCTGCAAaaaaagcaacaacagcagctcGCCGGTGTTCACTCACCTCACCAAATGACCCCGTCGCCTCTGCGCGCTCTGCATCCCCACATCTCACCCAGTGTCTACGAAATGGCGGCGCTCACACAGGATCTGGACACTCAAACCATCACGACGAAGATCAAGGAGGCCCTGCTGGCCAATAATATCGGTCAGAAGATCTTTGGCGAGGCTGTACTCGGCCTGTCGCAGGGATCTGTCAGCGAACTGCTCAGTAAACCCAAGCCCTGGCACATGCTCAGTATCAAGGGCCGCGAGCCCTTCATTCGAATGCAGCTCTGGCTATCCGATGCTCACAATGTTGATCGGTTGCAGCAGCTGAAGAATGAACGGCGCGAAGCCAACAAACGTCGACGTAGCTCGGGTCCAGGTCATGACAACAGTTCCGACACCTCCAGCAACGACACGGCCGAGTTTTACCACGCGGCGTCGCCGGGCCCGGGTCCACCATCGACCAAGAAACAGCGTGTACTGTTTTCTGAAGAACAAAAAGAGGCTTTGAGACTGGCTTTCGCCTTAGATCCTTACCCCAACGTGGCGACTATCGAGTTTCTGGCTGGTGAACTGGCTCTGTCGTCGCGCACCATCACCAACTGGTTCCACAATCATCGGATGCGTCTGAAGCAGCAGACACCGCATGGTCAGCCAGAGCCGCAATCTCCTCGCGAACCTGGCCAGCCATTTGACCCCGTGCAGTTCCGACTGCTGCTCAACCAAAGACTGCTGGAGATCCAAAAAGAGCGACTGGGTCTAAGCAACATGCCCATGCCCTACTCACCCTACTTTAATCCCAACCTGGCCACGCTCATGACCAACGCGCTCAAGGAGCAGTGCTCCGGTCTGGACCTGTCCATGGGCTCCTTGAAGCGCGAGCTCAACCAGGAGTTTGAGGACGAAGACGACGCTATGAGTAATCTTGGTAGCGAAGATTCTGATGCGTCGGCCGTGAGTATAAAACGGGAGCCCACTGATCACGGTCAGCAGAGTAATCCTACGCCGTCAGCCGCGAGGTCCAGTCGACGGAAGCCTGCTGCTCCTCAGTGGGTCAATCCAGATTGGACGCAGGAACCCACCGCGCGGTCCAGTGATGAAGTGATTATCAATGGCGTCTGCGTGATGAAAACTGATGACTATGGCGTGAAGCGTGAGGCCGAAGAGACGGTTAGGGTTGAGCCTACGCCTGTGCCTGAGCGCTATGAGGAAGATGCTCAGAGCGATGCGTCTTCGGTGTCTGGCGCGCAGGGTCCTGAAACACCCAGTCCCAGTCCAAAATCCGGCAGGAACAGTCCGGTTCCGTCACCTGCACAGACTAACCTTCCCGACAGTCCGAAGGAGGTGAAGAATGAGCCTGAAGAGGCGTGGGATTATTGA
Protein Sequence
MLESNLLAIYRMGIENRATLAEKEVSALKEKLANSKTEGQHAPQNVQSTEPSQEQTSNPRRTPNSNLEHELQAKDKEISQLVEEVSRLQQSLQRLQETSAQTTARLEEELESRRQHINRLESKLDRQRDYDDLKREISVLRSVDLSQIPTNEPGKSLEHLLMERTKALQQAESLKPPSTPDTLGGLASPLQRAATASPGGGSTPASTSQQAIPSRSTPTPSSVTSSNPAATNLLFPPPLQNVETFGSFLGEEIVANWRRSLERSIISQHQQNQPQCSQSQTNLQSSMHPPTPTASLNHLPSPTDLPAKSCTPLGGSQDSADKSPTPIPSTDPPAPQTPSSTALTSPPTSLPMMEAGGINGAALAIMPRVKSPVQEESCNNNSHHLVNNNTIGGLSVLDSLKSPFRFDDRTHPFRFGDEFGAAGMAGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDENAVMLLKSLIPKKGKEQGLPAFARGPQDGAPPDMNDERIAHILGESGHLHMSHDTSNDGDSKSPSRLGCPSPFGKDRYDSASKRLKKYENDDIPQEKVVRIYQEELAKLMGRRGDEIRGPRDYPASAMFPHFFSGGQSMHGMERTQEEIRIALDAYHRELQKLNSTPSQNAALAGLPSLPNLPGLLALHQQALHQNHMSANGGGVQDLSLGKVDPRSKIMNGVSEEEKEKMEEAMRHAGSAFSLVRPKQEPTGAQSTPGGSSASSPLGNSILPPAMAPNEDFTGAAAASPLQRMASITNSLISQPSTPTHHSSTQRPLKAVLPPITQQQFDLYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDEQAVHKLVASQYKIAPEKLMRTGGYGGLPPCGTPMKPMPPTKLVQEQLQNAAKVQAAAQAAAQAAAQHQQESSMQLGPPQPSPQHPQHPPAAMMLTPPGGHHPLSQLSIQDLQKKQQQQLAGVHSPHQMTPSPLRALHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNVDRLQQLKNERREANKRRRSSGPGHDNSSDTSSNDTAEFYHAASPGPGPPSTKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAGELALSSRTITNWFHNHRMRLKQQTPHGQPEPQSPREPGQPFDPVQFRLLLNQRLLEIQKERLGLSNMPMPYSPYFNPNLATLMTNALKEQCSGLDLSMGSLKRELNQEFEDEDDAMSNLGSEDSDASAVSIKREPTDHGQQSNPTPSAARSSRRKPAAPQWVNPDWTQEPTARSSDEVIINGVCVMKTDDYGVKREAEETVRVEPTPVPERYEEDAQSDASSVSGAQGPETPSPSPKSGRNSPVPSPAQTNLPDSPKEVKNEPEEAWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00937913;
90% Identity
iTF_00937913;
80% Identity
iTF_00937913;