Mcin009425.1
Basic Information
- Insect
- Macrocentrus cingulum
- Gene Symbol
- retn
- Assembly
- GCA_002156465.1
- Location
- MVJL01002165.1:6513-24646[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7e-22 1.9e-18 66.7 0.0 13 89 1 75 1 75 0.96 2 2 1.4 3.9e+03 -1.6 0.0 25 47 120 142 108 150 0.79
Sequence Information
- Coding Sequence
- ATGCAGAAAAGAGGCACGCCAATCAATCGATTACCCATCATGGCAAAGTCTGTGCTGGATCTGTATGAACTTTACAATTTAGTTATCGCTCGGGGCGGCCTGGTGGACGTCATCAACAAGAAACTCTGGCAGGAAATCATAAAGGGCCTTCACCTGCCGTCAAGCATCACTTCCGCCGCCTTCACACTGCGAACTCAgtacatGAAGTATCTCTACCCTTACGAGTGCGAGAAGCTGCGGCTGTCGAATCCAGCAGAGCTGCAGGCAGCCATTGACGGCAACAGGCGCGAGGGTCGTCGCAGCAGTTATGGAGCTTACGCCGGCGGGACAGGTTCGATGGGCAGCATGTTACCCATGGAGATTGAAGCGCGTATGGTCGAGTACGTAAAACTCATGAATAAAGAAATGAGAATCGGTGGTTCAAGGTCTCCACCGCCGATAGCAAATCGACAGGCTTCACCGCCGGCTACACCACCCCGAGATATACCACCTCTCAATGCCTTGGGATTTTCCTTTTGGAATTTGTACAATAATAACACACTTTATTCGAGTTTGGGTCACCAGCAGCAGCACCCAATGTCACCTCAGACCTCGCAGTCACCGAATCCACAGTCATCGAGTCCAGAGCCGCAGCGAGAAGCGTTGGATCTTGGTCTGAGATCGCCGCCCATGTCCACCTCACCCTCCAGACAGAGTCCCACCACGTCTGCTAGCACAATTCAGACTAAAAGGGAAAAAGACGTCGATGAGGATGGCCCACCTGCTCCCAAGAGGCCACTCAATGACGATGAAATGTCTGAGAAACAAGCTCCGCTGGTTTTAGGCgctaatattaaaattactaaCCGCAATGACGGTGGCAATAGTGATCATTCACTGTCTGTCAGCATAGAATTGAATGGAACTACGTATCAAGGTGTTTTATTTCCACAGGGCGATAGTCACAATGCCCCTAGCACAACAACTACTAACAATCATCAGAAAACACTGGCATGA
- Protein Sequence
- MQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKLRLSNPAELQAAIDGNRREGRRSSYGAYAGGTGSMGSMLPMEIEARMVEYVKLMNKEMRIGGSRSPPPIANRQASPPATPPRDIPPLNALGFSFWNLYNNNTLYSSLGHQQQHPMSPQTSQSPNPQSSSPEPQREALDLGLRSPPMSTSPSRQSPTTSASTIQTKREKDVDEDGPPAPKRPLNDDEMSEKQAPLVLGANIKITNRNDGGNSDHSLSVSIELNGTTYQGVLFPQGDSHNAPSTTTTNNHQKTLA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -