Basic Information

Insect: Machimus rusticus
Gene Symbol: -
Assembly: GCA_951509405.1
Location: OX608049.1:54837899-54839674[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.023 4.4 9.2 0.5 1 23 16 38 16 38 0.94

2 17 0.016 3 9.7 2.8 1 23 44 66 44 66 0.96

3 17 0.0064 1.2 10.9 2.5 1 21 101 121 101 122 0.95

4 17 3.1e-05 0.0059 18.2 0.5 1 23 129 151 129 151 0.98

5 17 1.3e-05 0.0024 19.4 0.3 1 23 157 180 157 180 0.97

6 17 0.0024 0.45 12.3 0.6 1 23 236 259 236 259 0.97

7 17 0.81 1.5e+02 4.3 0.1 2 23 276 299 275 299 0.86

8 17 0.00014 0.026 16.2 0.5 1 23 305 327 305 327 0.98

9 17 0.0002 0.038 15.7 4.0 2 23 333 354 332 354 0.96

10 17 0.01 2 10.3 1.0 1 23 360 382 360 382 0.97

11 17 6.1e-09 1.1e-06 29.9 4.8 1 23 388 410 388 410 0.98

12 17 0.00014 0.027 16.1 5.5 1 23 416 438 416 438 0.96

13 17 4.9e-07 9.2e-05 23.9 3.4 1 23 444 466 444 466 0.98

14 17 7.9e-06 0.0015 20.1 1.6 1 23 472 494 472 494 0.99

15 17 3.1e-05 0.0059 18.2 5.0 1 23 500 522 500 522 0.98

16 17 1.4e-07 2.7e-05 25.6 3.2 1 23 528 550 528 550 0.98

17 17 6.4e-08 1.2e-05 26.7 0.8 1 23 556 578 556 578 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.023	4.4	9.2	0.5	1	23	16	38	16	38	0.94
2	17	0.016	3	9.7	2.8	1	23	44	66	44	66	0.96
3	17	0.0064	1.2	10.9	2.5	1	21	101	121	101	122	0.95
4	17	3.1e-05	0.0059	18.2	0.5	1	23	129	151	129	151	0.98
5	17	1.3e-05	0.0024	19.4	0.3	1	23	157	180	157	180	0.97
6	17	0.0024	0.45	12.3	0.6	1	23	236	259	236	259	0.97
7	17	0.81	1.5e+02	4.3	0.1	2	23	276	299	275	299	0.86
8	17	0.00014	0.026	16.2	0.5	1	23	305	327	305	327	0.98
9	17	0.0002	0.038	15.7	4.0	2	23	333	354	332	354	0.96
10	17	0.01	2	10.3	1.0	1	23	360	382	360	382	0.97
11	17	6.1e-09	1.1e-06	29.9	4.8	1	23	388	410	388	410	0.98
12	17	0.00014	0.027	16.1	5.5	1	23	416	438	416	438	0.96
13	17	4.9e-07	9.2e-05	23.9	3.4	1	23	444	466	444	466	0.98
14	17	7.9e-06	0.0015	20.1	1.6	1	23	472	494	472	494	0.99
15	17	3.1e-05	0.0059	18.2	5.0	1	23	500	522	500	522	0.98
16	17	1.4e-07	2.7e-05	25.6	3.2	1	23	528	550	528	550	0.98
17	17	6.4e-08	1.2e-05	26.7	0.8	1	23	556	578	556	578	0.98

Sequence Information

Coding Sequence: ATGGATCTAGAAACCAAGACAGATGATCAAGAAATGGAAAATCAGTTCCTTTGCGCTATGTGTTCTCAGCATTTTCAAGATTTAATCGAACTGGAAACCCACGTCCGCGGGCATTTTAGCGAAGAGAAATTCTCCTGCGATCACTGCTCCATGGAATTCATCACATTCGACGAGTTTTTGCAACACTTTAAAGAGCACAAAACAATCATACAATTTCCTTGCAGGAGTTGCCCCTGGAAAGGGGGCTCCGTCGACGAATTCATTGAGCACGAAGCCCTCCACGTTCCTGGAGTGCTGTGGTTTGACTGCTTTAAGTGTGGGCAAGCTTGCAAAAATGCATTACAGCTCAAGAATCACAGGCGTTTTTGCTCTCTAGACAAAGGTTATCCCTGCGGAGCCTGTAACAAATCCTTTGCTAGATTGGACGATTTCCACATCCATCTACGAGTTCACAAGAGTCTCTCGGTGTTCGAATGCAAAATTTGCGGGAAAAACTTTGCAATTCCGAGGAACTTTGCTGTTCATTTGAAGAAGACACACAAAGAAGAGATTGATAGCCAGCATCAGGCGATTATCGACTATGGTTTGGAGCACGATGGCAGTtatgtagatattttaaagatttatgaGAAAAATAGCTTTGAGGGTAGTGTAGAAGTGGACAGAAATGAGattattcttaaaaagtaCGGTCTTTCAAAGATATTTAAGTGCTCCTTGTGCGAACTATCCTTCATCAGGAGCACTACGATTCTTCTACATTACCGTCTTGTCCATCCAGAAGCAGTGAAGCCCATCCAGCGAAAAACTGGAAcagaaaatctgaaatgtAATATTTGCATAGATATGAATTTTCCCTCAAAAATTGAGCTCGTACTCCACATGAACCAGATTCACAACGGCTTAAAGCCCTACGTATGCCACGTATGCAGACTTACTCTGGCTCGCCCGGAGACTCTGGAAAAACACCTTAAATGGCACAAACGAGATAGCCTCAAATGCAAATATTGCCGCAAGACATTCACCTACCGGACCTCTTTAGACTCACACAGGAAGCTTCATGAAGGGCCAGAAACTTTTCCTTGCTCCACCTGCTGCATCCCTTACTCTAGTAAAATAGCCCTGAAGCGACACGAACGAATCCATTCCGAAGGAACCCCTCACGAGTGTGATCATTGTGGTAAGCGATTTTCCCAGAAGAGCGATCTGCAGAAACACATGCGGGTCCACACCGGAGAAAGACCCTTTAAGTGCCACAGTTGTGGGAAGGCGTTCTCGCACTTAACGAGTTTCAAGAAGCACTCCATAATCCACTCAGATTCCAAGGAGCACCAGTGCTACACTTGCGGTAAGACGTTTAAACGCAAGGCGAATTTGGTGGTGCACACAAGGAGCCACACAGGCGTTAGACCGTACACTTGCAACATTTGCCAAAAATCGTTCCTCACTTCCGGACACTTGTCGGACCACATCCGGATTCATTCTGGAGAGAGAAGCCATCGGTGTAGCAACTGCGGAAAAGGATTTATCCACAAAAGCAGCCTCGATAAGCATAAAAAAGTGCACACCGGAGAAAGGCCGCATAGGTGCAATGTCTGCGAGAAATCCTTTCCTCAGCAGAGCCACTTGAGTGTGCACATGAGGATTCATACTGGCGAAAAGCCCTATATCTGTAATATCTGCAATAAAAGCTTCAAACGGACTGATGCTCTAAACAGCCACATGAAGATCCACGTAAAGCAGGTGAACGAAAATTCGCCAGATTCTATTTtatga
Protein Sequence: MDLETKTDDQEMENQFLCAMCSQHFQDLIELETHVRGHFSEEKFSCDHCSMEFITFDEFLQHFKEHKTIIQFPCRSCPWKGGSVDEFIEHEALHVPGVLWFDCFKCGQACKNALQLKNHRRFCSLDKGYPCGACNKSFARLDDFHIHLRVHKSLSVFECKICGKNFAIPRNFAVHLKKTHKEEIDSQHQAIIDYGLEHDGSYVDILKIYEKNSFEGSVEVDRNEIILKKYGLSKIFKCSLCELSFIRSTTILLHYRLVHPEAVKPIQRKTGTENLKCNICIDMNFPSKIELVLHMNQIHNGLKPYVCHVCRLTLARPETLEKHLKWHKRDSLKCKYCRKTFTYRTSLDSHRKLHEGPETFPCSTCCIPYSSKIALKRHERIHSEGTPHECDHCGKRFSQKSDLQKHMRVHTGERPFKCHSCGKAFSHLTSFKKHSIIHSDSKEHQCYTCGKTFKRKANLVVHTRSHTGVRPYTCNICQKSFLTSGHLSDHIRIHSGERSHRCSNCGKGFIHKSSLDKHKKVHTGERPHRCNVCEKSFPQQSHLSVHMRIHTGEKPYICNICNKSFKRTDALNSHMKIHVKQVNENSPDSIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00717957;
90% Identity: iTF_00717957;
80% Identity: -