Basic Information

Insect: Machimus rusticus
Gene Symbol: -
Assembly: GCA_951509405.1
Location: OX608052.1:6298717-6303068[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 2.8e-05 0.0052 18.4 2.9 1 23 345 367 345 367 0.98

2 18 1.1e-05 0.0021 19.6 0.2 1 23 373 395 373 395 0.97

3 18 5.1e-05 0.0096 17.5 1.7 1 23 401 423 401 423 0.98

4 18 1.5e-05 0.0028 19.2 3.1 1 23 429 451 429 451 0.97

5 18 0.00017 0.033 15.9 4.9 1 23 457 479 457 479 0.98

6 18 6.3e-05 0.012 17.3 5.7 1 23 485 507 485 507 0.97

7 18 4.9e-07 9.3e-05 23.9 3.7 1 23 513 535 513 535 0.98

8 18 1.1e-07 2.1e-05 25.9 2.4 1 23 541 563 541 563 0.97

9 18 0.00015 0.028 16.1 5.7 1 23 569 591 569 591 0.97

10 18 5.9e-05 0.011 17.4 6.4 1 23 597 619 597 619 0.98

11 18 1.6e-05 0.003 19.1 4.7 1 23 625 647 625 647 0.98

12 18 3.7e-05 0.007 18.0 8.3 1 23 653 675 653 675 0.98

13 18 5.9e-06 0.0011 20.5 7.6 1 23 681 703 681 703 0.97

14 18 6.6e-07 0.00012 23.5 7.7 1 23 709 731 709 731 0.98

15 18 0.00021 0.039 15.6 9.5 1 23 737 760 737 760 0.95

16 18 0.00017 0.033 15.9 0.5 1 23 766 788 766 788 0.97

17 18 0.00075 0.14 13.9 4.3 1 23 798 820 798 820 0.99

18 18 1.9e-05 0.0036 18.9 2.4 3 23 828 849 826 849 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	2.8e-05	0.0052	18.4	2.9	1	23	345	367	345	367	0.98
2	18	1.1e-05	0.0021	19.6	0.2	1	23	373	395	373	395	0.97
3	18	5.1e-05	0.0096	17.5	1.7	1	23	401	423	401	423	0.98
4	18	1.5e-05	0.0028	19.2	3.1	1	23	429	451	429	451	0.97
5	18	0.00017	0.033	15.9	4.9	1	23	457	479	457	479	0.98
6	18	6.3e-05	0.012	17.3	5.7	1	23	485	507	485	507	0.97
7	18	4.9e-07	9.3e-05	23.9	3.7	1	23	513	535	513	535	0.98
8	18	1.1e-07	2.1e-05	25.9	2.4	1	23	541	563	541	563	0.97
9	18	0.00015	0.028	16.1	5.7	1	23	569	591	569	591	0.97
10	18	5.9e-05	0.011	17.4	6.4	1	23	597	619	597	619	0.98
11	18	1.6e-05	0.003	19.1	4.7	1	23	625	647	625	647	0.98
12	18	3.7e-05	0.007	18.0	8.3	1	23	653	675	653	675	0.98
13	18	5.9e-06	0.0011	20.5	7.6	1	23	681	703	681	703	0.97
14	18	6.6e-07	0.00012	23.5	7.7	1	23	709	731	709	731	0.98
15	18	0.00021	0.039	15.6	9.5	1	23	737	760	737	760	0.95
16	18	0.00017	0.033	15.9	0.5	1	23	766	788	766	788	0.97
17	18	0.00075	0.14	13.9	4.3	1	23	798	820	798	820	0.99
18	18	1.9e-05	0.0036	18.9	2.4	3	23	828	849	826	849	0.95

Sequence Information

Coding Sequence: atgaatttaaatttgcagcTGGGAAAGTACTGGGTTGTAACGAATCTTTTCCAAGGCTCTGGCCAGAGTACCTATACTTTAGGATCTCCGCCAGTAACATCGTCTGTTCCCTCTTCTCTGCCACCGCCTATATCATCTACGCACACATCTACTGCGGGTTCTATGGTCAAAGTAGATACTATTAAACAAGAAGAAAGTCATATGCAACGTCATTCTCAGCAGCAACCACCGCCtccgcagcagcagcagcagcaacaacaagtGGTTACTTCTGTTAGTTCCAGTTCTATACAGATTCCAAATCCTATGATAAATCCTGTTACAAGTCAAAGCCAGCAGCAACAATTATCAAACGGAACTATAATATCGTCTGCACCGCCTGAACAAATTCAGGTTCCCGTCAATCCCGAGAATAGTCTTATGGTCATGGATGCTTCGACAAAGTCAGACAAGATGTCCAACATGAACACTTCAAATATGAACCAAGAACCAATGCAGGTTGATCGACAAATGCCTCACAATCTTCAGGAGCAAGTTAAGGAAGAGAAGCCGTTTTCGAACTGCAAACCTCCTAGTATCCAGAATATCCACCCACATCACTTGCCTCCAGACAGCAAAATGCACGTGCCTCATTTGCTAGATGTGCGCAATCCAGATGGCTCTATAGTTAAACTGCCTCCTCCTCCTACCGAACAGGAGCTTGGAAAATCACTTGGAGTCGAAATGTATAAAGTTAATATTGAGGATTTGAGCCAGTTTCTTTCATATCACGAAGTATTTGGAAAATTGCATGGGGATGTTATGAACCATCAGAGTTCGCATTCTAATACGCATCCCACAAACACCATAACGAACGCTCCTGGGATTCCGACTTCTACCAATGGGGGCTCAGTGGTCAGTAATATGGGTTCCTCAACAGGAGAACTTTTAATGCCCAAGATGGAAGTTGGTCAGATCACAGGGATAAATGCGAATCACGGTGCCAACAACTCTCATCCAATGGGTGATGCAGGTAACATAACTCCGGCCACGCATACCTGCGACATATGTGGAAAGATGTTTCAATTTCGATATCAATTGATAGTTCACCGACGGTACCATAGCGAAAGGAAGCCTTTTAATTGCCAGGTCTGCGGACAAGGGTTCACGTCACCACAAGATCTTACGCGCCACGGGAAAATTCATATTGGCGGCCCAATGTTCACGTGTACGGTGTGCTTTCATGTTTTTGCAAATGATGCTAGCTTGGAGAGGCACATGAAACGCCACTCAACTGATAAACCTTTTGCATGCACGATTTGTCAAAAAACTTTTGCCAGAAAAGAACATCTAGATAACCATTTTCGTAGCCACACTGGTGAAACACCATTTCGATGCCAGTTCTGTGCGAAAACCTTTACTCGAAAGGAACACATGGTTAATCACGTCCGAAAACATACGGGAGAGACGCCCCATAGGTGCGATATATGCAAAAAGTCTTTTACTCGTAAAGAGCACTATGTAAATCATTACATGTGGCACACagGAGAAACACCGCATCAGTGTGAAGTATGTGGAAAGAAATATACTCGAAAAGAACATCTAGCCAACCACATTCGTTCTCACACCAATGATACGCCTTTTCGATGTGAAATATGTGGAAAGAGTTTTAGTAGGAAGGAACACTTCACTAACCACATTTTATGGCATACTGGAGAAACTCCTCATCGTTGCGATTTTTGCGCTAAAACATTTACTAGAAAGGAACATTTGTTGAATCACGTTCGGCAGCATACTGGAGAATCGCCTCATCGATGTacatattgtttaaaaacgtTTACGCGTAAAGAACACCTTGTTAATCATGTCCGTCAGCACACTGGCGAAACGCCATTCAAATGTACATTCTGTACAAAGGCCTTTACAAGAAAAGATCATATGGTTAACCACATAAGGCAACACACCGGGGAATCCCCACATAAATGTACATTTTGTACTAAGACATTCACCAGAAAAGAACATCTTACAAACCACGTCCGCCAACATACTGGAGAATCCCCGCACAGGTGTTCATATTGTAAGAAGACGTTCACTCGTAAAGAACATCTCACCAACCATGTGCGATTGCATACGGGGGACTCGCCACACAAGTGTGAATATTGCCAGAAAACATTTACCAGGAAGGAACATTTGAACAACCACATGAGGCAACACTCTAGTGATAACCCGCACTGCTGTAACGTttgcaataaaccatttacGAGGAAAGAACATCTAATAAATCACATGTCCAGGTGTCACACTGGGGATCGACCATTTGCTTGCGAAACGTGTGGGAAATCTTTCCCGCTAAAGGGAAATTTACTTTTCCATCAAAGAAGTCATACGAAGGGCCAAGATGTTGAGAGACCATTTAGGTGCGATAAATGTCCCAAggattttatttgtaaaggacATTTGGTGTCTCATATGCGATCACATTCGGGAGAAAAACCACATTTGTGTACACTATGCAGTAAATCTTTCGTAGAGAAAGGAAATCTTAAACGTCATATTAAAATGAACCATCCAAATGTAATGTTGCCTCCTCCGGCAACAATGACCACCACTATAAAAACGGAATCAATTCCTACAAGCAGTAGCTCACCTCAATTCATAAATGAACGGATTCAGTTGCTTACGAAGGCAAATCTCTTGcctattaataatttaaccCCACACCAACCACCCACTATGCACACTATTCAACAAATTACATCATCTGCAGGAACTTCTGGCGGTGGTAATGCGAATAATAATAGTTCTTTGCCAGGTGGCTTAGTGCCAATAGTCACATCTACAATAACATCACATGCGAGtcaacagcaacagcagcagcagcaacaacaacagcaacaacagcagcaacagcatGTATCATCTCAGATGCATCAGCCCCCGCCACCTCATCATCAGCAACCGAACACAAATCCGTCTGATCAGCCTCCGTCATCTGTACCAATAACAATTATTCAAACAGGTGACCCAACTGCAATAGCTCGTGCTGCAATACAATTGCAGCATGCGATTCCAACAAATGTGGAACAGCACCCGGTAGTGTATTGA
Protein Sequence: MNLNLQLGKYWVVTNLFQGSGQSTYTLGSPPVTSSVPSSLPPPISSTHTSTAGSMVKVDTIKQEESHMQRHSQQQPPPPQQQQQQQQVVTSVSSSSIQIPNPMINPVTSQSQQQQLSNGTIISSAPPEQIQVPVNPENSLMVMDASTKSDKMSNMNTSNMNQEPMQVDRQMPHNLQEQVKEEKPFSNCKPPSIQNIHPHHLPPDSKMHVPHLLDVRNPDGSIVKLPPPPTEQELGKSLGVEMYKVNIEDLSQFLSYHEVFGKLHGDVMNHQSSHSNTHPTNTITNAPGIPTSTNGGSVVSNMGSSTGELLMPKMEVGQITGINANHGANNSHPMGDAGNITPATHTCDICGKMFQFRYQLIVHRRYHSERKPFNCQVCGQGFTSPQDLTRHGKIHIGGPMFTCTVCFHVFANDASLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGETPHQCEVCGKKYTRKEHLANHIRSHTNDTPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCAKTFTRKEHLLNHVRQHTGESPHRCTYCLKTFTRKEHLVNHVRQHTGETPFKCTFCTKAFTRKDHMVNHIRQHTGESPHKCTFCTKTFTRKEHLTNHVRQHTGESPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFACETCGKSFPLKGNLLFHQRSHTKGQDVERPFRCDKCPKDFICKGHLVSHMRSHSGEKPHLCTLCSKSFVEKGNLKRHIKMNHPNVMLPPPATMTTTIKTESIPTSSSSPQFINERIQLLTKANLLPINNLTPHQPPTMHTIQQITSSAGTSGGGNANNNSSLPGGLVPIVTSTITSHASQQQQQQQQQQQQQQQQQHVSSQMHQPPPPHHQQPNTNPSDQPPSSVPITIIQTGDPTAIARAAIQLQHAIPTNVEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00628542;
90% Identity: iTF_01256539;
80% Identity: -