Mrus002125.1
Basic Information
- Insect
- Machimus rusticus
- Gene Symbol
- -
- Assembly
- GCA_951509405.1
- Location
- OX608049.1:15930681-15931753[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.9e-08 3.8e-05 24.5 0.0 2 39 16 54 15 59 0.88 2 2 5.8 5.7e+03 -1.6 0.0 16 23 130 137 124 138 0.78
Sequence Information
- Coding Sequence
- AtggtgaaaaattataaaagaaagacGGAGAGGGGGAATTGGAGTGAACAGAGTATGAAAAATGCCGTAGATGTTGTAATTGAAGGGAAAATGGGGTATAAATTAGCGTCGCAAAGATATTTTGTGCCACAAACGACCCTCGAAAGAAAAGTCAAAGAAGCTCGCGCAGCGCTAGAAGATCCTGCTGCCCCTGCAACTTCGGTGAAAGTTCCTTTAGGCCCAAAAAAGCGAACATTTTCTGATGACGAAGAGAAAGAACTTTCCAACTATATAATGGATATGGAGAGTCGTCTTTATGGACTTACAACAAAAGATTTAAGGGCTTTGGCATACACTCTGGCAGTAAAAAATGGGAAGCATCCAGAATTGTCGATACGAAAACCAGAAAGCACTTCAGTTGCACGTGCCGCTGGGTTCAATAAACAAGCTCTTGAACAGTTTTTTAACTTCCTCGGCAACGTTTATGATGAGCACAAACTTTCGTCGGACAGAGTTTTTAATTGCGATGAAACAGGAGTTTCAGTGGTACCTAAAACAAAGTCAAAAATAATTGCACGAAAAGGCAGAAAACAAGTGGGGTCCATAACTTCTGCGGAGAGAGGTACTACAATAACTATAGAAATATGTTTTAGTGCTAGTGGTCAACACATGCCCCCAATGATGGTATTCCCAAGAAAGAGAATGGACTTACAGCTAATGCTGAATACTGCTCCTGGAGCCTGGGGTGTTTGCAGCGATTCTGGCTGGATGACAGCTGAATTATTCCTTGGCTGGTTTAAGAAGTTTGTTGAATTTAGTGGGGCAACGCTGGATCGACCTGTGCTGTTGTTGTTAGATGGCCACAGCACCCATACACAAAACCTTGACGTCATTAATGAAGCTCGTTCCAATGGGGTTATTATATTATGCTTCCCTCCACATACGACTCATCGACTTCAAGTCGCCGACGTAGCGTACATGAGACCGTTGAGTACGTACTACGACCAACAAATTACTGCCTGGCTTTGA
- Protein Sequence
- MVKNYKRKTERGNWSEQSMKNAVDVVIEGKMGYKLASQRYFVPQTTLERKVKEARAALEDPAAPATSVKVPLGPKKRTFSDDEEKELSNYIMDMESRLYGLTTKDLRALAYTLAVKNGKHPELSIRKPESTSVARAAGFNKQALEQFFNFLGNVYDEHKLSSDRVFNCDETGVSVVPKTKSKIIARKGRKQVGSITSAERGTTITIEICFSASGQHMPPMMVFPRKRMDLQLMLNTAPGAWGVCSDSGWMTAELFLGWFKKFVEFSGATLDRPVLLLLDGHSTHTQNLDVINEARSNGVIILCFPPHTTHRLQVADVAYMRPLSTYYDQQITAWL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01431814; iTF_01431813;
- 90% Identity
- -
- 80% Identity
- -