Mrus005915.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Machimus rusticus
Gene Symbol
-
Assembly
GCA_951509405.1
Location
OX608049.1:42163753-42164864[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.8e-14 3.7e-11 43.8 0.0 1 39 8 46 8 51 0.87

Sequence Information

Coding Sequence
ATGGCACGGAAAAGGAAATATTCAGAGGAAGACTTAGATAAAGCCCTAAAAGAAATTGGGAATGGTCTTTCTATACATAAGGcggcaaaaatatttaatattcctCGCCCTACTTTGCAAAATCGGATCCACAAAAGGaccaaaaaatatagttttggtCCTTCTCCCATACTTGTGCCTGAAGAAGAACAACAAATAGTGCAGTGGcttcttgaaaataatgccAAAGGCTTTCCTCGAAGAAAGCATGATGTAGAATTTGTAGTGAAGCAGTTTTTGGATGCATGTCCGAGACAAAATCCCTTCGTGGATAATTTACCTGGTAAAAAATGGTATGCATCTTTTCTTCGCCGGCATCCAGAGCTCTCTAATAGAACACCAGAGCCCATTACGGATGCAAGTTCTAAAGTTTCGGAATCCGACATTCGAAAGTggttcacccaaattgattcgtaccttaaagaaaaaaacttgcAGCATATTTTGGATGATCCATCACGAGTATTTAATGGTGAtgagacaaattttttaatgtgcCCGAAAGGTGGGAAGGTATTAGCAGCTAAAgGTGCGAAGAATATATACGAAACTGATCGAGGACAAGCTAAGGAGAATTTAACAGTCATGTTCTCATTTTCTGCCTCTGGACTTGTTATTCCACCAATGATAATATACCCGTATAAAAGAATGCGAAATGATATTATCGATTCAATACCAGATGGTATTGCCTGGCAAAAATCGGACACTGGGTGGATGAGCTCCGAAGTCtttctaaattatataaaagatgtATTTTATCCAAGTCTCACAGCTAATAACATTACACTTCCTGTAATAACAGAACGCATCTCACCTATGAGTTATCCAAACTCtgtaatgaattaa
Protein Sequence
MARKRKYSEEDLDKALKEIGNGLSIHKAAKIFNIPRPTLQNRIHKRTKKYSFGPSPILVPEEEQQIVQWLLENNAKGFPRRKHDVEFVVKQFLDACPRQNPFVDNLPGKKWYASFLRRHPELSNRTPEPITDASSKVSESDIRKWFTQIDSYLKEKNLQHILDDPSRVFNGDETNFLMCPKGGKVLAAKGAKNIYETDRGQAKENLTVMFSFSASGLVIPPMIIYPYKRMRNDIIDSIPDGIAWQKSDTGWMSSEVFLNYIKDVFYPSLTANNITLPVITERISPMSYPNSVMN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00937197;
90% Identity
iTF_00937196; iTF_00937197;
80% Identity
iTF_00937196;