Basic Information

Insect: Machimus atricapillus
Gene Symbol: -
Assembly: GCA_933228755.1
Location: CAKOFS010000008.1:969454-973016[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 3.8e-07 6.9e-05 24.0 1.6 2 23 149 170 149 170 0.97

2 11 1.7e-07 3.1e-05 25.1 0.5 1 23 176 198 176 198 0.98

3 11 8.2e-06 0.0015 19.8 0.4 1 23 204 226 204 226 0.96

4 11 5e-06 0.00092 20.5 0.5 4 23 237 256 232 257 0.92

5 11 5.1e-05 0.0094 17.3 2.9 1 23 262 284 262 284 0.97

6 11 1.7e-05 0.0032 18.8 3.9 1 23 290 313 290 313 0.98

7 11 0.0063 1.2 10.7 2.4 1 23 319 341 319 341 0.97

8 11 7.2e-05 0.013 16.9 0.7 1 23 346 368 346 368 0.98

9 11 0.00037 0.068 14.6 0.8 2 23 375 399 374 399 0.96

10 11 0.00017 0.032 15.7 0.7 2 23 515 537 514 537 0.93

11 11 1.8 3.2e+02 3.1 4.6 1 23 562 585 562 585 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	3.8e-07	6.9e-05	24.0	1.6	2	23	149	170	149	170	0.97
2	11	1.7e-07	3.1e-05	25.1	0.5	1	23	176	198	176	198	0.98
3	11	8.2e-06	0.0015	19.8	0.4	1	23	204	226	204	226	0.96
4	11	5e-06	0.00092	20.5	0.5	4	23	237	256	232	257	0.92
5	11	5.1e-05	0.0094	17.3	2.9	1	23	262	284	262	284	0.97
6	11	1.7e-05	0.0032	18.8	3.9	1	23	290	313	290	313	0.98
7	11	0.0063	1.2	10.7	2.4	1	23	319	341	319	341	0.97
8	11	7.2e-05	0.013	16.9	0.7	1	23	346	368	346	368	0.98
9	11	0.00037	0.068	14.6	0.8	2	23	375	399	374	399	0.96
10	11	0.00017	0.032	15.7	0.7	2	23	515	537	514	537	0.93
11	11	1.8	3.2e+02	3.1	4.6	1	23	562	585	562	585	0.95

Sequence Information

Coding Sequence: ATGGAGAGTATTTGTAGATTGTGTTTTCAACCTGCGGCGCTCTTTCAAGTTCCGGGCTACAACCTTCCGACTTGTGCCAAGTGCTCGGAACACTTGACCACAAACGGACTATCAGCGACCACCTTCTACGTCCGGCCGGACGGCACAGGCACTCAGCAGCCCCAACCAGCAAACGGGGCTCCAGCGATCGCTCCGGAAGGTGGCGTTCATCAGTCACAGTCGCAGGCTCAGCAGCACCAAGTTTCACAGCCACAGAACATACACACGCCGCCTCAGGAACACAACTCAACCGGTGACCATTCAAATTCCTCAGTGCAGTCTTCGAACCAGCCGACTAATCAAAGCACCCCCCAAGTCAGTGGTAAGAAGGACGGAATCATGCCTTTTGATCTGGAGAAGACAATACAAAACCTTGATGTGGATCTTCTTTTCAACGAGGAAGGATCCTGTCCCCTTTGCTCCAAAACATTTTCAAGAAAATCTTCATTATTAACTCATATACGAAATCACTCCGCTGAGAGGAAATACGTCTGCACATATTGTCAGAAGGGTTTCACACAAGCTGCAAATCTGCGGAATCATGAAAGAATACACACGAATGATAGGCCATATGTTTGCATTGACTGCGGTAAAGCATTTACACAAATTACCAACCTGAACAATCATAGAAGACTGCACACGGGTGAGAGACCATTTGTTTGTATAGAACCGGAATGCGGGCGGTCTTTTGCACAAGTAACAAATTTAAATAATCACATGAAAACTCATCACAAAGTGCAGCAGTATTGCTGTAATCAGTGTCCGAAAAAGTTTACACAAGTGACTTCGTTGAACCAGCATCTGCAAGCGCATGCTGGAATCACGGGATTCTACTGCCCCCGGTGCCCTGAGAAAACGTTCAAACAACAATCACAGCTGCATACTCACATGAAAACACATGGATTAGCCTTCCCATTCGAATGCCAGAAATGTGATGAAAAATTCCTCCAGCAAGCACATTTGGACCAGCACAATAAAATGCACGATGAATTCAAGTTCAAATGCGAAATGTGTCCGAGCTCCTTTAATCAGGAGATTCTGCTAAAGAAGCACGTTCAGAGACATATCGAAGGGAGGTATATAACATGTCCTGTTGCTAATTGTAATCAAGGATTCACCGTAAAACAACATTTATCGAAGCACCTTTTAACCCGCCATTCTCATAGTGAACTTCCACCACCGAAACGGCCGAAGAAGCCCCAACTGCAGCAGACGCAACCTCAACAACAGTCGCAGCAGCAGCCACCGCCACAGCAGCATGCAATTCATCTCATTGGGAATTCAATAACAACACCTCACCCAGTTCCTGGACGTGGCAGGCCGCCGAAAAAGAAAATAAATGTTATAAGCAACACACCGATTCTATTGCAAAGCATCAGCATAAAACAGGAGCCATCAGGTATGACCGATGTACAATCAAACGGAAACATTACAGCGGTCCAGTTGAAAAACTCAGACATAATTGCAGGAAATAACCATGAAACCTCAGATAGTGAAGATACGAAGTGTCATGATTGCGGTGTGATATTTCCAAATGAAAATGATTTAAGAGACCATATCTTCTATAAGCATCCTGAAAGGAGATTTATGCAGGCTGTTATAGAAGAAAACAAGTATCTGATGCGAATGCAAAGTCAACAAAATTTTGTATGCAATCTCTGTTGCAATGTATTTAAAAGCCATTTATCGCTAGTGCGCCATACAGCTAAGTTTCATGGTCAACTATTGTAA
Protein Sequence: MESICRLCFQPAALFQVPGYNLPTCAKCSEHLTTNGLSATTFYVRPDGTGTQQPQPANGAPAIAPEGGVHQSQSQAQQHQVSQPQNIHTPPQEHNSTGDHSNSSVQSSNQPTNQSTPQVSGKKDGIMPFDLEKTIQNLDVDLLFNEEGSCPLCSKTFSRKSSLLTHIRNHSAERKYVCTYCQKGFTQAANLRNHERIHTNDRPYVCIDCGKAFTQITNLNNHRRLHTGERPFVCIEPECGRSFAQVTNLNNHMKTHHKVQQYCCNQCPKKFTQVTSLNQHLQAHAGITGFYCPRCPEKTFKQQSQLHTHMKTHGLAFPFECQKCDEKFLQQAHLDQHNKMHDEFKFKCEMCPSSFNQEILLKKHVQRHIEGRYITCPVANCNQGFTVKQHLSKHLLTRHSHSELPPPKRPKKPQLQQTQPQQQSQQQPPPQQHAIHLIGNSITTPHPVPGRGRPPKKKINVISNTPILLQSISIKQEPSGMTDVQSNGNITAVQLKNSDIIAGNNHETSDSEDTKCHDCGVIFPNENDLRDHIFYKHPERRFMQAVIEENKYLMRMQSQQNFVCNLCCNVFKSHLSLVRHTAKFHGQLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00937495;
90% Identity: iTF_00937495;
80% Identity: -