Basic Information

Insect: Machimus atricapillus
Gene Symbol: -
Assembly: GCA_933228755.1
Location: CAKOFS010000209.1:77900-80498[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 6.8e-05 0.012 16.9 0.1 1 23 328 351 328 351 0.94

2 12 6.6e-05 0.012 17.0 1.4 1 23 359 381 359 381 0.97

3 12 0.00026 0.048 15.1 1.1 1 23 388 410 388 410 0.95

4 12 7.7e-07 0.00014 23.1 1.7 1 23 416 438 416 438 0.99

5 12 1.5e-05 0.0028 19.0 0.7 1 23 445 467 445 467 0.97

6 12 3.5e-05 0.0064 17.9 0.5 1 23 473 495 473 495 0.95

7 12 2.9e-05 0.0053 18.1 0.3 1 23 501 523 501 523 0.98

8 12 2.6e-06 0.00048 21.4 1.0 1 23 529 552 529 552 0.96

9 12 2.1e-05 0.0038 18.6 2.0 1 23 558 581 558 581 0.97

10 12 4.8e-06 0.00088 20.6 2.1 1 23 587 609 587 609 0.99

11 12 1.5e-05 0.0027 19.0 0.5 1 23 615 637 615 637 0.96

12 12 0.00064 0.12 13.9 0.2 1 22 643 664 643 667 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	6.8e-05	0.012	16.9	0.1	1	23	328	351	328	351	0.94
2	12	6.6e-05	0.012	17.0	1.4	1	23	359	381	359	381	0.97
3	12	0.00026	0.048	15.1	1.1	1	23	388	410	388	410	0.95
4	12	7.7e-07	0.00014	23.1	1.7	1	23	416	438	416	438	0.99
5	12	1.5e-05	0.0028	19.0	0.7	1	23	445	467	445	467	0.97
6	12	3.5e-05	0.0064	17.9	0.5	1	23	473	495	473	495	0.95
7	12	2.9e-05	0.0053	18.1	0.3	1	23	501	523	501	523	0.98
8	12	2.6e-06	0.00048	21.4	1.0	1	23	529	552	529	552	0.96
9	12	2.1e-05	0.0038	18.6	2.0	1	23	558	581	558	581	0.97
10	12	4.8e-06	0.00088	20.6	2.1	1	23	587	609	587	609	0.99
11	12	1.5e-05	0.0027	19.0	0.5	1	23	615	637	615	637	0.96
12	12	0.00064	0.12	13.9	0.2	1	22	643	664	643	667	0.92

Sequence Information

Coding Sequence: ATGGCTGAGTCCCTGCAAATTTCATCTACTGAAGTAGATAACGCGAATTGTTTCCTGTGTGATATTAATATAAGAGATGATAGGTGTTTATTACTTTTCGGAAAAAGGGAACAAGATGAAATCAACTATCCACTTTCAGTTAGTCTATCTTCAATACTCGGAAAGGAAGTAGAAGAGCACACATCTTATTCAAAGGTAATGTGCGAAGCCTGCCATCTGTTAATACAAGAATATGAAATAATTGAGCAAAGGTACCTTGATTTGAAGTGCAAAATAGTTGAGACTTATAACAAGACGGCCACCAAACATGGAGCTGAGACAATTTCTTTTGGGGTTGAAAATGAGGAGTTTACTATCTCATTATGCGAGCCGTCTTTTGTTAATAATCATCACTCTACAAATGTTCTCACAGAAGGCGAAAAAATGCAAGAACAAGACTCGACTGAACTCCTGACGATCCTTTGTGACAGTCAATTAGATAATAATTTTGTGAGTGAACGGCCCAGGTCAACTGTTGCTACAGTTCAATACCAAGCTAAAGTTGAAAATGAGGAGTATTTCGATGAAAGTACGGAAAATATGGTTGAAGTTATGTCGGAAGACGTTCATTATGAACAAATCATAGAGCATAGTTCACAAACCAGTTGCGATGATAGCAATAGCACCACAGATCCTTCAACTAGTAATATAAATAATTTACAATCAGGGGCGGAGAGTGCGACCTCCCTTAATTCCACTATTGCATTAAAAAATGAAGAACCTTTAACTGGCGATTTAATATTAGATGTTTCTACTGTTGGGTCCAGAAGTGGAAAACGACGAAAAAAACATGAGAAAATTCCTGATAACAAAGTGGTTTTTGAATGCAAAGATGATAAATATTACTGTCGTGTATGTTCTGAAGATGATAAAGGCGAAGAGGTCGAGTACGATGTACATTCAATATGTTTGCATCTGAGAAGCCAGCACAACATTCGAGCGTATATCTGCGACATTTGTGGGGAGGATTTCCGGAAAAGGATTGAGCTAACAGAGCACATGGATGAGGACCATGGTGGAACCGAAGATGGAGAATTTCCTTGCGAAACTTGTAATAGGGTGTTTACAAATTTACGACTGTTTCGCATTCATAAACGGCTTCATTACACGTCTTCAAAGCAATTTCTTTGCGTACAATGTAATAAGAAGTATAGTTCGAAAAACTTATTGGATGAACATATGAATATGCATACAGGACGTCGGCCTTATAAATGCAATTATTGCACAAAAGATTTTGCCTCAAAATATACACTAACTGCtcatctaaaaatacattcagatagacctcgtccgtttgcttgtagaatttgttcgaaagctttttttagtgcacaaaatttacagcaacatgttaaaactcattcaggagtgaaagagtttatatgtgaggtatgcaaaaaagcgtttggaactcaacataatttggaagtccataaagtagtgcataccgggtataagccttttatatgtcggacttgtggtaaagcttttgctagaagagcagaaataaaagatcatgaacgtactcatacgggtgaaaaacctttcacctgcgatatttgtagcatgtcttttgcccaaagatccaatcttacaactcataaaagggcaacgcattttaatgataaaaggtataaatgcgatcgttgcgatcgatcatttaagcgacgaagattattagactaccacattcgagccactcatactggcgagaggccttataaatgcgaaatgtgcaatgccacatttgtttatcctgagcactataaaaagcatcttcgcattcacactggagttaaaccttatgcttgcgaagtatgcggaaaaacatttaatagtcgagacaacagaaatgctcaccgattcatccacagcgataaaaagccttacgaatgcttagtatgcggccaaggttttatgagaaaacctctgttatatacccatatgcaACAATCTGGTCATTACAACGATACCATCGTGGTAAATCAACCTAGGGTCTCTGATTCAGAAGTAACGAAGGATACAGATACAAATAGTTTTGTAGAAGAAGAGAACATACCCGAAGATGAAATGGATGAAGAACATCTTATAATTGATGGTCCAGTACAATTGGCTACTACTTCCGAAACCCAAGTTATCGACGAATCAACTGAGGTGCCTAATGTTATTTTATCCGCTGATCTTTCGGACGTTATAACTTCGGAGCAAATCCTTGTAACTGATGAAGGTCATTTTGTGAAAAATGAAGACGGTTCTCTTCAAATGGTTCAAATTCGGACTAAAGACGAAAATGGTAAAGAAAGATACACATGGGTGAATTTAGTTTCTGAAAAAGAAGAATAG
Protein Sequence: MAESLQISSTEVDNANCFLCDINIRDDRCLLLFGKREQDEINYPLSVSLSSILGKEVEEHTSYSKVMCEACHLLIQEYEIIEQRYLDLKCKIVETYNKTATKHGAETISFGVENEEFTISLCEPSFVNNHHSTNVLTEGEKMQEQDSTELLTILCDSQLDNNFVSERPRSTVATVQYQAKVENEEYFDESTENMVEVMSEDVHYEQIIEHSSQTSCDDSNSTTDPSTSNINNLQSGAESATSLNSTIALKNEEPLTGDLILDVSTVGSRSGKRRKKHEKIPDNKVVFECKDDKYYCRVCSEDDKGEEVEYDVHSICLHLRSQHNIRAYICDICGEDFRKRIELTEHMDEDHGGTEDGEFPCETCNRVFTNLRLFRIHKRLHYTSSKQFLCVQCNKKYSSKNLLDEHMNMHTGRRPYKCNYCTKDFASKYTLTAHLKIHSDRPRPFACRICSKAFFSAQNLQQHVKTHSGVKEFICEVCKKAFGTQHNLEVHKVVHTGYKPFICRTCGKAFARRAEIKDHERTHTGEKPFTCDICSMSFAQRSNLTTHKRATHFNDKRYKCDRCDRSFKRRRLLDYHIRATHTGERPYKCEMCNATFVYPEHYKKHLRIHTGVKPYACEVCGKTFNSRDNRNAHRFIHSDKKPYECLVCGQGFMRKPLLYTHMQQSGHYNDTIVVNQPRVSDSEVTKDTDTNSFVEEENIPEDEMDEEHLIIDGPVQLATTSETQVIDESTEVPNVILSADLSDVITSEQILVTDEGHFVKNEDGSLQMVQIRTKDENGKERYTWVNLVSEKEE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00717964;
90% Identity: iTF_00717964;
80% Identity: -