Matr029459.1
Basic Information
- Insect
- Machimus atricapillus
- Gene Symbol
- ZFY
- Assembly
- GCA_933228755.1
- Location
- CAKOFS010000235.1:94295-95800[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.0002 0.038 15.4 0.7 2 23 12 33 11 33 0.97 2 15 0.00076 0.14 13.6 0.8 2 23 92 114 91 114 0.95 3 15 0.11 20 6.8 2.1 1 23 120 142 120 142 0.94 4 15 0.00013 0.023 16.1 1.9 1 23 148 170 148 170 0.98 5 15 2.1e-05 0.0038 18.6 3.1 1 23 178 200 178 200 0.96 6 15 4.2e-06 0.00077 20.7 1.3 1 23 207 229 207 229 0.98 7 15 3.6e-07 6.6e-05 24.1 4.2 1 23 235 257 235 257 0.98 8 15 5.8e-06 0.0011 20.3 2.3 2 23 266 287 265 287 0.98 9 15 3.3e-06 0.00061 21.1 0.4 1 23 294 316 294 316 0.98 10 15 2.2e-06 0.0004 21.7 2.1 1 23 322 344 322 344 0.97 11 15 2e-05 0.0036 18.6 0.8 3 23 352 372 351 372 0.98 12 15 4.4e-06 0.00081 20.7 2.0 1 23 380 402 380 402 0.98 13 15 3e-05 0.0055 18.1 0.6 1 20 408 427 408 428 0.95 14 15 0.00013 0.023 16.1 5.7 2 23 438 459 437 459 0.97 15 15 0.028 5.2 8.7 1.6 1 23 463 485 463 485 0.97
Sequence Information
- Coding Sequence
- ATGACTACTTTGGATAAATTGCTCGGCGACGTTACCTGCGATGACTGCGATCTCAGTTTTAAGAGTTTTGCAGAGTACTTCTTACACAGAAAAAGCCACACAGTATTAATGCGGCGCAAGATTTCCGAGCAAACACTTCTGGAGGGATGCTGTCCGATGTGCTTTTTGAAATATTACAAAAAGTATAAGGACGTCTGTTTGGAAAACCTCTTGGGAAGTGGTAAAATGGTTAAGAAAGGGAGGGATAAGCCAAAAAAAGTGATGTTCTGCAAATATTGCCCGAAATGTGATATTCAATTTCGTACTTCGAACATGTTTCTCAGTCATGCAAAATCGGTGCACAATGATGATAGACCGTATTCATGCGGAAAATGTACTTTTGCATCTTTCCGATACCAAGATCTCAAACGGCATAGTTATGTTCATGTCGACTATAAAATGTTCAGGTGCCACCTTTGCCCAAAGGAGTATACAACGAAAACCTCGCTGGACGGTCACTTGCTGAGCCACAACGGCGTTAAAATAAAGTCCCACGACTGCTCTTACTGTGGTAAGAAGTTTCCTATTTTGCATTTGCTGAAGCGGCACATTAAAGTACACAATCCTACCTCAGAGACGTTTAAGTGTAATTTATGCCCTAAGGAATTTGCCTATAAGCAGAGTTTAAAATTgcacatgctttatcacaccggcgagaagccctacgagtgtccttactgccagaaacgtttcacccagagatttaactaccgccggcacttgcagaggcacaaccacatcctcgggactctgattaaatgctcctactgcgataagcagttcctcaccaggtaccttttaaaaaggcacatgcagacccacgagaaggacgagaacgccttcgtttgtgatatttgctccaagccgttcacgcgggaagagagcctcaacctgcacaaattgacccacacaggtaacatgccattcacctgcgaatattgtgataagaaattcaaccgcatctcgagcttcaatcgacatcgggccattcacaTTGATGCCGATCAAGTCGATTGCGAGCACTGTGGGAAGAGCTTCCCTGGACTCTATCGGCTCCAAAGACATGTAAAAATTCATACAAGACCTATAGAAAAACCGTTCAAGTGCTCCATATGTCCTAAGCAATTCTCCAAGAAGCCAGATTTTAAAAATCATCTCCTCAAACACGAGGGCCGGGAACCTTACGATTGTCAGCATTGTGGAAAGAGGTTTATTAAGCAGAGAGCTCTTAAAATTCACCTCGATCCAGATAAACAGGCAAAACACATTTTAAGATGCCGCGAATGCCCAAAGACTTTTAAAAATAAGAATTGCTTAACGTACCACAAACGGTCTCATAAGGACGAATTTTTCTGTGAGGTGTGTAACGGAAAATTTTTAACTCGGGATGGATTCCGAAATCACTTAAAGCGACATGATATTAAAAAAGAACCTAAAGTTAAAGTCGAAATTAAACAAGAAATGTAA
- Protein Sequence
- MTTLDKLLGDVTCDDCDLSFKSFAEYFLHRKSHTVLMRRKISEQTLLEGCCPMCFLKYYKKYKDVCLENLLGSGKMVKKGRDKPKKVMFCKYCPKCDIQFRTSNMFLSHAKSVHNDDRPYSCGKCTFASFRYQDLKRHSYVHVDYKMFRCHLCPKEYTTKTSLDGHLLSHNGVKIKSHDCSYCGKKFPILHLLKRHIKVHNPTSETFKCNLCPKEFAYKQSLKLHMLYHTGEKPYECPYCQKRFTQRFNYRRHLQRHNHILGTLIKCSYCDKQFLTRYLLKRHMQTHEKDENAFVCDICSKPFTREESLNLHKLTHTGNMPFTCEYCDKKFNRISSFNRHRAIHIDADQVDCEHCGKSFPGLYRLQRHVKIHTRPIEKPFKCSICPKQFSKKPDFKNHLLKHEGREPYDCQHCGKRFIKQRALKIHLDPDKQAKHILRCRECPKTFKNKNCLTYHKRSHKDEFFCEVCNGKFLTRDGFRNHLKRHDIKKEPKVKVEIKQEM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00937477;
- 90% Identity
- iTF_00717965;
- 80% Identity
- -