Basic Information

Insect: Machimus atricapillus
Gene Symbol: -
Assembly: GCA_933228755.1
Location: CAKOFS010000181.1:241905-246212[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 2.4e-05 0.0044 18.4 2.9 1 23 343 365 343 365 0.98

2 18 9.8e-06 0.0018 19.6 0.2 1 23 371 393 371 393 0.97

3 18 4.4e-05 0.0082 17.5 1.7 1 23 399 421 399 421 0.98

4 18 1.3e-05 0.0024 19.2 3.1 1 23 427 449 427 449 0.97

5 18 0.00015 0.028 15.9 4.9 1 23 455 477 455 477 0.98

6 18 5.4e-05 0.01 17.3 5.7 1 23 483 505 483 505 0.97

7 18 4.3e-07 7.9e-05 23.9 3.7 1 23 511 533 511 533 0.98

8 18 9.5e-08 1.8e-05 25.9 2.4 1 23 539 561 539 561 0.97

9 18 0.00013 0.023 16.1 5.7 1 23 567 589 567 589 0.97

10 18 5.1e-05 0.0094 17.3 6.4 1 23 595 617 595 617 0.98

11 18 1.4e-05 0.0025 19.1 4.7 1 23 623 645 623 645 0.98

12 18 3.2e-05 0.0059 18.0 8.3 1 23 651 673 651 673 0.98

13 18 5.1e-06 0.00094 20.5 7.6 1 23 679 701 679 701 0.97

14 18 5.7e-07 0.0001 23.5 7.7 1 23 707 729 707 729 0.98

15 18 0.00018 0.033 15.6 9.5 1 23 735 758 735 758 0.95

16 18 0.00015 0.028 15.9 0.5 1 23 764 786 764 786 0.97

17 18 0.00065 0.12 13.9 4.3 1 23 796 818 796 818 0.99

18 18 1.6e-05 0.003 18.9 2.4 3 23 826 847 824 847 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	2.4e-05	0.0044	18.4	2.9	1	23	343	365	343	365	0.98
2	18	9.8e-06	0.0018	19.6	0.2	1	23	371	393	371	393	0.97
3	18	4.4e-05	0.0082	17.5	1.7	1	23	399	421	399	421	0.98
4	18	1.3e-05	0.0024	19.2	3.1	1	23	427	449	427	449	0.97
5	18	0.00015	0.028	15.9	4.9	1	23	455	477	455	477	0.98
6	18	5.4e-05	0.01	17.3	5.7	1	23	483	505	483	505	0.97
7	18	4.3e-07	7.9e-05	23.9	3.7	1	23	511	533	511	533	0.98
8	18	9.5e-08	1.8e-05	25.9	2.4	1	23	539	561	539	561	0.97
9	18	0.00013	0.023	16.1	5.7	1	23	567	589	567	589	0.97
10	18	5.1e-05	0.0094	17.3	6.4	1	23	595	617	595	617	0.98
11	18	1.4e-05	0.0025	19.1	4.7	1	23	623	645	623	645	0.98
12	18	3.2e-05	0.0059	18.0	8.3	1	23	651	673	651	673	0.98
13	18	5.1e-06	0.00094	20.5	7.6	1	23	679	701	679	701	0.97
14	18	5.7e-07	0.0001	23.5	7.7	1	23	707	729	707	729	0.98
15	18	0.00018	0.033	15.6	9.5	1	23	735	758	735	758	0.95
16	18	0.00015	0.028	15.9	0.5	1	23	764	786	764	786	0.97
17	18	0.00065	0.12	13.9	4.3	1	23	796	818	796	818	0.99
18	18	1.6e-05	0.003	18.9	2.4	3	23	826	847	824	847	0.95

Sequence Information

Coding Sequence: ATGAATTTAAATTTGCAGCTGGGAAAGTACTGGGTTGTAACGAATCTTTTCCAAGGCTCTGGCCAGAGTACCTATACTTTAGGATCTCCGCCAGTAACATCGTCTGTTCCCTCTTCTCTGCCACCGCCTATATCATCTACGCACACATCGACTGCGGGTTCTATGGTCAAAGTAGACACTATTAAACAAGAAGAAAGTCATATGCAGCGACATTCTCAGCAGCAACCACCCCCCCCGCAGCAGCAGCAACAGCAAGTGGTTACTTCTGTTAGTTCCAGTTCTATACAGATTCCAAATCCGATGATAAATCCTGTCACAAGTCAAAGCCAGCAGCAACAATTATCAAACGGAACTATAATATCGTCTGCACCGCCTGAACAAATTCAGGTTCCCGTCAATCCCGAGAACAGTCTTATGGTCATGGATGCTTCGACAAAGTCCGACAAGATGGTCAACATGAACACTTCAAATATGAACCAAGAGCCAATGCAGGTTGATCGACAAATGCCTCACAATCTTCAGGAGCAAGTTAAGGAAGAAAAACCGTTTTCGAACTGCAAACCTCCTAGTATCCAAAATATCCACCCACATCACTTGCCTCCAGACAGCAAAATGCACGTGCCTCATTTGCTAGATGTGCGCAATCCAGATGGCTCTATAGTTAAACTGCCTCCGCCTCCTACCGAACAGGAGCTTGGAAAATCACTTGGAGTCGAAATGTATAAAGTTAATATTGAGGATTTGAGCCAGTTTCTTTCATATCACGAAGTATTTGGAAAGTTGCATGGGGATGTAATGAACCATCAGAGTTCGCATTCTAATACGCATCCCACAAACACCATAACGAACGCTCCCGGGATTCCGACTTCTACCAATGGGGGCTCAGTGGTCACTAATATGGGTTCCACAGCAGGAGAACTTTTAATGCCCAAGATGGAAGTTGGTCAGATCACAGGGATAAATGCGAATCACGGTGCCAACAACTCTCATCCAATGGGTGATGCAGGTAACATAACTCCGGCCACGCATACCTGCGACATATGTGGAAAGATGTTTCAATTTCGATATCAATTGATAGTTCACCGACGGTACCATAGCGAAAGGAAGCCTTTTAATTGCCAGGTCTGCGGACAAGGGTTCACGTCACCACAAGATCTTACGCGCCACGGGAAAATTCATATTGGCGGCCCAATGTTCACGTGTACGGTGTGCTTTCATGTTTTTGCAAATGATGCTAGcttggagaggcacatgaaacgccattcaactgataaaccatttgcatgcacgatttgtcaaaaaacttttgccagaaaagagcacctagataaccattttcgtagccacactggtgaaacaccatttcgatgccagttctgtgcgaaaacctttactcgaaaggaacacatggttaaccacgtccgaaaacatacgggagagacgccccataggtgcgatatttgcaaAAAATCTTTTACTCGTAAAGAGCATTATGTAAATCATTACATGTGGCACACAGgagaaacaccgcatcagtgtgaagtatgtggaaagaaatatactcgaaaagaacatctagccaaccacattcgttctcacaccaatgatacgccttttcgatgtgaaatatgtggaaagagttttagtaggaaggaacacttcactaaccacatTTTATGGCATACTGgagaaactccccatcgttgcgatttttgcgctaaaacatttactagaaaggaacatttgttgaaccatgttcggcagcatactggagaatcgcctcatcgatgtacatattgtttaaaaacgtttacgcgtaaagaacaccttgttaatcatgtccgtcagcacactggcgaaacgccattcaaatgtacattctgtacaaaggcctttacaagaaaagatcatatggttaaccacataaggcaacacaccggggaatccccacataaatgtacattttgtactaagacattcaccagaaaagagcatcttacaaatcacgtccgccaacataccggagaatctccgcacaggtgttcatattgtaagaaaacgttcactcgtaaagagcatctcaccaaccacgtacggttgcatacgggcgactcgccacacaagtgtgaatattgccagaaaacgtttacgaggaaggaacatttgaacaaccatatgaggcaacactctagtgataaccctcactgctgtaacgtttgcaataaaccatttacgaggaaagaacatctaataaatcacatgtccaggtgtcacactggggatcgaccatttgcttgcgaaacgtgtgggaaatctttCCCACTGAAGGGAAATTTACTTTTCCATCAAAGAAGTCATACAAAGGGCCAAGATGTTGAGAGACCATTTAGGTGCGATAAATGTCCCAAGGATTTTATTTGTAAAGGACATTTGGTGTCTCATATGCGATCACATTCGGGAGAAAAACCACATTTATGTACACTATGCAGTAAATCTTTCGTAGAGAAAGGAAATCTTAAACGTCATATAAAAATGAACCATCCAAATGTAATGTTGCCTCCACCGGCAACAATGACCACCACTATAAAAACGGAATCAATTCCTACAAGCAGTAGCTCACCTCAATTCATAAATGAACGGATTCAGTTGCTTACGAAGGCGAATCTCTTGCCTATCAATAATTTAACCCCACACCAGCCACCCACTATGCACACTATTCAACAAATTACATCATCTgcaggaacttcgggcggtggtaatgcaaataataatagttctttgccaggtggtttagggccaatagtcacgtctacaataacatcacatgcaagtcagcagcaacagcagcagcagcagcaacagcaacagcaacaacaacagcagcagcagcagcaacaacagcagcaacaacagcatgtagcatctcagatgcatcagcccccgccacctcatcatcagcaaccgaacacaaatccgtctgatcagcctccgtcatctgtaccaataacaattattcaaacaggtgacccaactgcaatagctcgtgctgcaatacaattgcagcatgcgattccaacaaatgtggaacagcaCCCGGTAGTGTATTGA
Protein Sequence: MNLNLQLGKYWVVTNLFQGSGQSTYTLGSPPVTSSVPSSLPPPISSTHTSTAGSMVKVDTIKQEESHMQRHSQQQPPPPQQQQQQVVTSVSSSSIQIPNPMINPVTSQSQQQQLSNGTIISSAPPEQIQVPVNPENSLMVMDASTKSDKMVNMNTSNMNQEPMQVDRQMPHNLQEQVKEEKPFSNCKPPSIQNIHPHHLPPDSKMHVPHLLDVRNPDGSIVKLPPPPTEQELGKSLGVEMYKVNIEDLSQFLSYHEVFGKLHGDVMNHQSSHSNTHPTNTITNAPGIPTSTNGGSVVTNMGSTAGELLMPKMEVGQITGINANHGANNSHPMGDAGNITPATHTCDICGKMFQFRYQLIVHRRYHSERKPFNCQVCGQGFTSPQDLTRHGKIHIGGPMFTCTVCFHVFANDASLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGETPHQCEVCGKKYTRKEHLANHIRSHTNDTPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCAKTFTRKEHLLNHVRQHTGESPHRCTYCLKTFTRKEHLVNHVRQHTGETPFKCTFCTKAFTRKDHMVNHIRQHTGESPHKCTFCTKTFTRKEHLTNHVRQHTGESPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFACETCGKSFPLKGNLLFHQRSHTKGQDVERPFRCDKCPKDFICKGHLVSHMRSHSGEKPHLCTLCSKSFVEKGNLKRHIKMNHPNVMLPPPATMTTTIKTESIPTSSSSPQFINERIQLLTKANLLPINNLTPHQPPTMHTIQQITSSAGTSGGGNANNNSSLPGGLGPIVTSTITSHASQQQQQQQQQQQQQQQQQQQQQQQQQQQHVASQMHQPPPPHHQQPNTNPSDQPPSSVPITIIQTGDPTAIARAAIQLQHAIPTNVEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00628542;
90% Identity: iTF_01256539;
80% Identity: -