Basic Information

Insect: Macaria liturata
Gene Symbol: mtfA_1
Assembly: GCA_964023185.1
Location: OZ026814.1:3889952-3895205[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.034 2.6 9.2 1.4 1 23 57 80 57 80 0.95

2 12 0.056 4.3 8.5 0.1 2 22 114 134 113 134 0.94

3 12 0.021 1.6 9.9 0.1 1 23 260 282 260 282 0.97

4 12 0.0011 0.086 13.9 0.4 1 23 291 313 291 313 0.99

5 12 0.00069 0.053 14.6 2.0 1 23 319 342 319 342 0.97

6 12 0.0028 0.21 12.7 1.6 1 23 684 707 684 707 0.96

7 12 0.00023 0.018 16.0 1.3 2 23 903 924 902 924 0.97

8 12 0.12 9.3 7.5 6.3 1 23 930 953 930 953 0.97

9 12 0.21 16 6.7 1.7 1 23 986 1010 986 1010 0.92

10 12 0.1 8 7.7 0.6 1 21 1034 1054 1034 1057 0.83

11 12 0.0017 0.13 13.3 0.2 2 23 1097 1118 1096 1118 0.96

12 12 0.026 2 9.6 5.3 1 23 1124 1146 1124 1146 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.034	2.6	9.2	1.4	1	23	57	80	57	80	0.95
2	12	0.056	4.3	8.5	0.1	2	22	114	134	113	134	0.94
3	12	0.021	1.6	9.9	0.1	1	23	260	282	260	282	0.97
4	12	0.0011	0.086	13.9	0.4	1	23	291	313	291	313	0.99
5	12	0.00069	0.053	14.6	2.0	1	23	319	342	319	342	0.97
6	12	0.0028	0.21	12.7	1.6	1	23	684	707	684	707	0.96
7	12	0.00023	0.018	16.0	1.3	2	23	903	924	902	924	0.97
8	12	0.12	9.3	7.5	6.3	1	23	930	953	930	953	0.97
9	12	0.21	16	6.7	1.7	1	23	986	1010	986	1010	0.92
10	12	0.1	8	7.7	0.6	1	21	1034	1054	1034	1057	0.83
11	12	0.0017	0.13	13.3	0.2	2	23	1097	1118	1096	1118	0.96
12	12	0.026	2	9.6	5.3	1	23	1124	1146	1124	1146	0.97

Sequence Information

Coding Sequence: ATGGAGAGGATTAAGTTCGAGCGGCAGGAGTTGAGGAGTACTCGTACTACCAGCATCGACAGCGACAACCGCTCCGACCGCAGCGAAGAAGACTACTTACGTAGACCGAGGAAACGTGCTGCCTCCACTTCCCCTTCACCCATTCCTATGGACAAGAGGACGGCTAGATTCGAATGCCCCAAATGCCACCAAAGATTCGACTCCATCAACGCATTCGACATCCACCGCTTCACAGCCCACGGGGATGAAGCACGCTGCGGTTACGATGACCTCGTAGACTTCTCCAAAAAGAAATTCCCCGAAATTACTCGAGGATTAGAAAGAAGCATCGAAAGACTAAGATGCGAAATGTGCACCAGAGACTTTCCCAACGCACAAGTCTTGAACATTCACAGGAAGACGTGCTCGCCGTCGAACAGAATACCGACACCGGACCGCGACCGCCGAGATGCTTTCTTCCACACACTGAACCTCAACAGGTCGTTGGGCATTCCTGGCACGTTAACGCCTCCTATGGAAAGGTTCACTCCAAAGTTCGACGATGGACATATCGGTAACGGCATACGGCACATCGACGCAACCCGAGACTTGGCAGACATTCATTCGATATTGCAAGTTGCACAAACGGGCAGCCTTTTAGAGAGACTCACTTGCACCAGAGTTACTTTAGAAAATTCCGTCTTAACGCCACCCGATACGGTCATGAAAGAGCGCGAACAGGAAGAGACGCAAGACAATTTTGCGGCGGAGTTTAGACGGATGAAGCTACGAGGTGAATTCCCTTGTCGCCTCTGTCCAGCCAAGTTCCCAAACCTTCGAGCCTTGAAGGGACATAACAGGGTGCACCTGAGTGGCACCGGCCCTGGTCCGTACCAATGCAACATGTGTCCACACGCTTCATTAGACAAGGCTGCACTTGTTAGACACATGCGGACTCACAACGGTGACCGCCCGTATGAATGCGCTGTTTGCAACTACGCGTTTACCACCAAAGCAAACTGCGAACGCCATCTGAGAAACAGACACGCCAAAGTTACCAGAGAAGACGTGAAGCGGTCTATCATTTACCATCCTTCAGAAGACCCCAACAACGACGATAACTTGAAAATAGCCAGAGATGAAAGCAAGCGGCCGTCGTACACTTTACATACGCCAGAGCTCGACAGACGAAGTGACAGCACTGGTCGGGACACACCGCTCACACACTTTGCACCGAGCTTCATCGCTAACAGACACCCTGTAACAGATTTAGCCACCAAACCCATTATACCCGAAGTGGTCTTAACTCCTCGTGAACCGGAACCAGAGAGAATCAAACCAAAAATCCAGGTAAAGCCCGAGTTCATGATGCCAGAAATCTcttacaaaactaataatatccGGCCCGAAACATACGaggaggaagaagaagaagaagactccCCGGTAGATCTGAGCATTAACGACCACAACAACTGTGATGCTTTGGATCTCACACAGAAGAAGCGTGATTCTGACAGCGATGAACCAAAAGTATCCCCTCGTCCTTCAATTGAGCCCGATAGTGCTGCTGCGGCTGTTGCTTTGGAAAATACCCGGATTCTCTTAGCCCAGAAAAGACTGATCGAGAACTCTCTCGACCCTGCTTTTTACGCCTCTCAGCTCTCTCAATTGTACGCTGGTGCGGTACCAGGGCTGCCTGGTCTCCCTCTACCACCGTCCTTTCCTTACTTTCTTCAGCCATCTTTTTTTCCCCACCCTTCCGACTCCCAGCAACTGGCCGAAATGAAGCAGCGCATACACAAAGAAATTATACGAGGTCTCAGTATGTCAGGTGGACGGCTTGTCCCAAACGAACAGGAAGTTCCTCCCACGCTGGAGCCGGAGCCCGAAGAGAGAGATGAAAAACCTATCCCTCAAGTAATCTCTCCGGCACTCTCCCCCCAATCTGAATCTCCTCGCCCGGTCTGCAATAATATAGGGCCGCAGTCTGACGCTGTGAAGATGGTCATAAAAAACGGCGTGTTGATGCCAAAGCAAAAGCAAAGACGCTACCGCACTGAAAGGCCGTTTTCGTGCTCGCAATGCTCAGCCAGATTCACTCTTCGTTCTAATATGGAAAGACATGTAAAGCAGCAGCATCCTCAACATTGGAGTGTGAGACGTCCGGCTCCGCGAGCACCACCTCCGTACCCTACATCCGAAGCTTTAGCTGATCGAGTAAAGTTTGCGCTCCTTGCTCGTCACCTTGAGAGACCATTACAGCAACCTGAACGCTCACCCATCCGTCGTGACTCAGATGAAGTAGCTGACAACGAAGAAGATGAAGAGGACGCTCTAGTTATTGACGAAGAGCCAGAATTGGACCAGAAGCCAGAAGACCACAGCGGTGCTAGACGAGCCGCTGCAGAAATCCTCATGGCCACGTGTCAGCAAGAAATGAACAAAGACTTCGATCTCAAAATCGCTGGAAATCTCATCAATAAACCCATTCCTGTAACCACCGAGAAAACTGAGACTGGAACGGATCCTATACCGTTGAACTTGCATGAACCATTACCAGTCCCAGTCGTGCCTACTCGTAGCGAtgaagaagaagatgaagaagGCTTGGTGGCCTCTACCAGTGAGGGAAACAACTCTGGCAGTGatgaaaataaATCGGAATCAGACACCAACCAACCACCAAAGAAGAAGTCAGCATACAGCCTGGCCCCAAACCGCGTATCCTGCCCGTACTGCCACCGCAAGTTCCCGTGGTCTTCATCCCTCCGCCGCCATGTTTTGACCCACACCGGCCAGAAGCCTTTCAAATGCTCCCATTGCCCTCTGCTATTCACCACCAAATCCAACTGTGATCGCCATTTGTTGCGCAAACACGGGGGCTCTGCGCGCTCGATCCAAGCCGAGCCAATTCCTGAGACCGTGACTCCTCCACAGCCAACCAATGACGTCAGAACTGTCCCGGATAGGCCTTTCAAATGCGCCACTTGTACAACCAGCACGTTCGCCACAATGGATACGCTCAAAAAGCACATGTCTTCACGCCACGGCTCCGGAGAATCCCAGCCAGGCTCACCCAATCCTGAGAATAGTGAAGAAAACCATGATGGTTTAGTCTTCAAGTGCCATCTGTGCGAGGCTTCATTCAGTGACCGAACGGCTTCTTTGAACCACTTGGCTGGAACTCATGCAGCGGAGTATGAGCAGCTGGTCAGCAAAGGAGCTCTGGACGCGGCCAGCGATAGAAGCGAGAgcgctgatgatgatgaaagggGGAAGTTTCCAGACCATGCTAACAGAAAGGTGGTCTGCGCCTTCTGCGTCCGTCGTTTCTGGTCTGCCGAGGACCTACGCCGCCACATGCGCACACACTCCGGCGAGCGTCCATTCGCCTGCGACCTCTGCCGGCGTCGCTTCACACTAAAACACAGCATGCTGCGTCATAGGAAGAAGCACCGTGAGGAGATCACTGATGATGAAGAGCCCTCTCCTCCGTGCACGCCTGAGGAGAAAGTTAATGGGTACCGATACCAAGACGACGATTCAGGCAATGAGATTCTGAATAACGTGAACAATAATAATTCACCACCGGCCGCTCCGTTTGAGAAGAAGCTGAAATTGGACATGTCTTCTCGCAAATACTCTTCTGAAGCAGAAATCGAAGGCGAAAACGGCAGTGATCTTATCGGTAAACTTCTTGGCATACCTGACAAAACAATTAACAAACTCCTCAGCTCAGCCGACGAAGCTGCGAAAATCTTGGGTGTTAACAAATGA
Protein Sequence: MERIKFERQELRSTRTTSIDSDNRSDRSEEDYLRRPRKRAASTSPSPIPMDKRTARFECPKCHQRFDSINAFDIHRFTAHGDEARCGYDDLVDFSKKKFPEITRGLERSIERLRCEMCTRDFPNAQVLNIHRKTCSPSNRIPTPDRDRRDAFFHTLNLNRSLGIPGTLTPPMERFTPKFDDGHIGNGIRHIDATRDLADIHSILQVAQTGSLLERLTCTRVTLENSVLTPPDTVMKEREQEETQDNFAAEFRRMKLRGEFPCRLCPAKFPNLRALKGHNRVHLSGTGPGPYQCNMCPHASLDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKVTREDVKRSIIYHPSEDPNNDDNLKIARDESKRPSYTLHTPELDRRSDSTGRDTPLTHFAPSFIANRHPVTDLATKPIIPEVVLTPREPEPERIKPKIQVKPEFMMPEISYKTNNIRPETYEEEEEEEDSPVDLSINDHNNCDALDLTQKKRDSDSDEPKVSPRPSIEPDSAAAAVALENTRILLAQKRLIENSLDPAFYASQLSQLYAGAVPGLPGLPLPPSFPYFLQPSFFPHPSDSQQLAEMKQRIHKEIIRGLSMSGGRLVPNEQEVPPTLEPEPEERDEKPIPQVISPALSPQSESPRPVCNNIGPQSDAVKMVIKNGVLMPKQKQRRYRTERPFSCSQCSARFTLRSNMERHVKQQHPQHWSVRRPAPRAPPPYPTSEALADRVKFALLARHLERPLQQPERSPIRRDSDEVADNEEDEEDALVIDEEPELDQKPEDHSGARRAAAEILMATCQQEMNKDFDLKIAGNLINKPIPVTTEKTETGTDPIPLNLHEPLPVPVVPTRSDEEEDEEGLVASTSEGNNSGSDENKSESDTNQPPKKKSAYSLAPNRVSCPYCHRKFPWSSSLRRHVLTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGGSARSIQAEPIPETVTPPQPTNDVRTVPDRPFKCATCTTSTFATMDTLKKHMSSRHGSGESQPGSPNPENSEENHDGLVFKCHLCEASFSDRTASLNHLAGTHAAEYEQLVSKGALDAASDRSESADDDERGKFPDHANRKVVCAFCVRRFWSAEDLRRHMRTHSGERPFACDLCRRRFTLKHSMLRHRKKHREEITDDEEPSPPCTPEEKVNGYRYQDDDSGNEILNNVNNNNSPPAAPFEKKLKLDMSSRKYSSEAEIEGENGSDLIGKLLGIPDKTINKLLSSADEAAKILGVNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00827412;
90% Identity: -
80% Identity: -