Basic Information

Insect: Macaria liturata
Gene Symbol: -
Assembly: GCA_964023185.1
Location: OZ026807.1:15463846-15467721[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00015 0.012 16.6 0.9 2 23 267 288 266 288 0.97

2 12 0.63 48 5.2 0.5 5 14 346 355 343 359 0.85

3 12 9e-05 0.007 17.3 1.6 1 23 373 396 373 396 0.97

4 12 0.00019 0.015 16.3 1.1 1 23 400 422 400 422 0.98

5 12 0.017 1.3 10.2 1.1 2 23 444 466 443 466 0.93

6 12 6e-05 0.0046 17.9 2.1 1 23 470 493 470 493 0.98

7 12 0.0061 0.47 11.6 0.3 2 23 516 538 515 538 0.90

8 12 6.8e-06 0.00052 20.9 5.2 1 23 548 570 548 571 0.96

9 12 0.0056 0.43 11.7 1.0 3 23 588 608 587 608 0.98

10 12 0.0036 0.28 12.3 1.6 1 23 614 636 614 636 0.96

11 12 0.1 8.1 7.7 2.8 1 22 642 663 642 666 0.90

12 12 0.0067 0.51 11.5 0.2 3 23 717 737 715 737 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00015	0.012	16.6	0.9	2	23	267	288	266	288	0.97
2	12	0.63	48	5.2	0.5	5	14	346	355	343	359	0.85
3	12	9e-05	0.007	17.3	1.6	1	23	373	396	373	396	0.97
4	12	0.00019	0.015	16.3	1.1	1	23	400	422	400	422	0.98
5	12	0.017	1.3	10.2	1.1	2	23	444	466	443	466	0.93
6	12	6e-05	0.0046	17.9	2.1	1	23	470	493	470	493	0.98
7	12	0.0061	0.47	11.6	0.3	2	23	516	538	515	538	0.90
8	12	6.8e-06	0.00052	20.9	5.2	1	23	548	570	548	571	0.96
9	12	0.0056	0.43	11.7	1.0	3	23	588	608	587	608	0.98
10	12	0.0036	0.28	12.3	1.6	1	23	614	636	614	636	0.96
11	12	0.1	8.1	7.7	2.8	1	22	642	663	642	666	0.90
12	12	0.0067	0.51	11.5	0.2	3	23	717	737	715	737	0.97

Sequence Information

Coding Sequence: ATGGATTTATCAAGCAATACCACACAAGAGACCAATGATACTCTCACCCAAGAAATAACCATCAAGGAAGAGTTTAATCTGCAGATCGAAGAAAATATTGAAGTTAAAACAGAGTTAGACCTAGAGATTACTCCAGATAGCTTCGGAGACCATGAAGTGCATATAAAAGAAGAATTGCCTTCTAATATTGAACCAGAAGATGTACAGAGTATTGAAGTTAATCcaatcaatataaaaaatgaGCCAGGAATGGGCGAAACTGAAATCATTGTGCCTACTAGTTTGGCTGAAGCTGGAGTGAAACAAGAGCCAACCCAGTACAACTACCCAGTGTATGAGGACAGTATGGACAGCAGTGAGGCGGCCGCACTCACTCGGGTGGAGGTGTGCCTCACTGACGGAGTCAATGTCAAGATTGAGGATGATGCTTTCGAGGATAACCAGAAAGACTACCCGCGAGTCATCAAGGAGGAATCAGAACTAACAGTGACAGAGACCCAACTAATCTCCAACAAGTTCATCAACACCACATCTACTATAACAAACACTCACGACGGTATCATCGAGTCTCAGACAACCAAAACACTGATCATGGAAATACATCCCATGACAGGAGAAAATCAGAGCCTAAAAATGGCAAACCCGGAAGAAATATTACCAACTACAGAAGATAACTACGAAGACATGGATTGTGACTTCCAACTCAACTCAATAACTGGCAACATTTTATCTCTCGAGCAAGAAGCGTATGGTTTGTTAAAAACGACTAAAGCTAAGACCCTCGATGTAGACCCAGTCATGTGCCCGAAATGTCCAAAAATTTGCAAATCTAAATACGTACTAGCGAGACATTTGAAAATTCATGCTGGTATCGAGAGAAGAGAAAACGGAGTACTAAAAGGAATGAAGGCTAAATTGAAGAAAAAACAAGAAATGGAATTATTAGATCCTGATGAAATCAAAATGGAGGCAAAGGCATTGATTAAACAGGAAGGTAGGCCGGTGAAGAGAGAAGATTCTTCACGATATCAGTGTACTTGTGGAAAGAGCTTTAGAAGACGGAGTCGCATGGAAACATGTCTCCGATCTCACTCAGATTACGCCGACTCGAGCTCCTATGACTGTCCCTCGTGCGAAAAGAAATTCAAATCCAAAGAGTTGCTTCTAACCCACCGACAAAGACAGCACCGGAAAAAGTTTCCTTGCAAATTTTGCCCCACAGACTATAACACTCAAAAAGAGCTATTCAAACATCTACAGATACACCAGAAAGTTCAGTTAACCGAGTATAAAGTGATCACAGAAGTTGCGAACGGCAAGCAAGAGTTGCAATGTTTGTTATGCGACAAGAAGTGTACGAATCTACCGGATTACAAATCGCACGTCATGGAAGATCATACAGAACCGTACAAATGTCCACATTGCACTGaaacatttaacaaaatatcaGATTTCGCGATACATATAAAGAAAACGCACACAGAAGTAGGTGACCAGTCCGTTTTAGATGTCTTAGAAGCGTTCTCAATGTTGGTCAGGGCTTGGAAATGTGAGAATTGCGGGAAACAATTTCACGAAGCTGATAAATTAGCGTTACACCAAGTTGAAGAGCACGCTCCGGATATGAAGAACGAACAGCATTTCCAATGTAAAGATTGTCAAAGGGTTTTCATCAGTAAATGCGGTTTGAACTCCCATATGAGGATGCATCATAGAACAGATGGGACGGAAGAAATAGAACCGGAAGAAGTTGGGGTGTTATGTCTTGAATGCAGAAAGGTCTGTCCCGATATGAACGCTCTAACCTCACATATGAGATTACATTCAATGGACAGAAAGTATCCGTGCAAATTCTGCGATTTCCGCTTCTCAACGCCACAGAAGCGAAAAAAACACGCGGAAATTCACACTGGAGATATGAAATATGTCTGCTTTATTTGCGAATACACTTGCAGCTCAGAGAATCGTCTCAAACAACACAAATTGTCGATAAAACATGCAAATATGAAGGAATATTTGCTAACGGGCAAACCTTTGATAGAAGAAGAACAATCTACGTCCAAATCGCAAAAAATCAAAGACACGTTACGAAAGAAAGAGTGGGgagttaaaaagaaaaagaagagagACAAGGATGGCAATATAGCGTGTGATATTTGTGGAGACAAGTTCACGAGTGAGAGGGAGATGCAAGAACATAAACAGACACATCCGTTTATAGAGTTTCCTAACGATGATAAGCCGAGTAGGATATTCTTTAAATGA
Protein Sequence: MDLSSNTTQETNDTLTQEITIKEEFNLQIEENIEVKTELDLEITPDSFGDHEVHIKEELPSNIEPEDVQSIEVNPINIKNEPGMGETEIIVPTSLAEAGVKQEPTQYNYPVYEDSMDSSEAAALTRVEVCLTDGVNVKIEDDAFEDNQKDYPRVIKEESELTVTETQLISNKFINTTSTITNTHDGIIESQTTKTLIMEIHPMTGENQSLKMANPEEILPTTEDNYEDMDCDFQLNSITGNILSLEQEAYGLLKTTKAKTLDVDPVMCPKCPKICKSKYVLARHLKIHAGIERRENGVLKGMKAKLKKKQEMELLDPDEIKMEAKALIKQEGRPVKREDSSRYQCTCGKSFRRRSRMETCLRSHSDYADSSSYDCPSCEKKFKSKELLLTHRQRQHRKKFPCKFCPTDYNTQKELFKHLQIHQKVQLTEYKVITEVANGKQELQCLLCDKKCTNLPDYKSHVMEDHTEPYKCPHCTETFNKISDFAIHIKKTHTEVGDQSVLDVLEAFSMLVRAWKCENCGKQFHEADKLALHQVEEHAPDMKNEQHFQCKDCQRVFISKCGLNSHMRMHHRTDGTEEIEPEEVGVLCLECRKVCPDMNALTSHMRLHSMDRKYPCKFCDFRFSTPQKRKKHAEIHTGDMKYVCFICEYTCSSENRLKQHKLSIKHANMKEYLLTGKPLIEEEQSTSKSQKIKDTLRKKEWGVKKKKKRDKDGNIACDICGDKFTSEREMQEHKQTHPFIEFPNDDKPSRIFFK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -