Basic Information

Insect: Macaria liturata
Gene Symbol: -
Assembly: GCA_964023185.1
Location: OZ026809.1:10646364-10661710[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 4.3 3.3e+02 2.6 2.7 1 23 446 469 446 469 0.95

2 25 0.39 30 5.9 0.8 2 23 500 522 499 522 0.96

3 25 0.065 5 8.4 0.3 2 23 552 573 551 573 0.91

4 25 3.6 2.8e+02 2.9 4.2 1 23 577 599 577 599 0.92

5 25 0.099 7.7 7.8 3.3 3 20 612 629 610 630 0.93

6 25 7.6 5.8e+02 1.8 1.1 2 11 644 653 643 667 0.85

7 25 0.00079 0.061 14.4 1.7 1 23 674 696 674 697 0.96

8 25 0.011 0.85 10.8 1.7 2 23 706 726 705 726 0.96

9 25 0.064 4.9 8.4 0.3 2 23 752 774 751 774 0.92

10 25 0.0054 0.42 11.7 0.8 1 23 806 828 806 828 0.97

11 25 0.22 17 6.7 3.8 2 23 833 854 832 854 0.95

12 25 0.064 4.9 8.4 0.6 2 20 861 879 860 881 0.93

13 25 0.022 1.7 9.8 0.1 3 23 926 947 925 947 0.93

14 25 0.021 1.6 9.9 0.5 3 23 955 975 954 975 0.96

15 25 5.5e-06 0.00043 21.2 1.4 1 23 981 1003 981 1003 0.98

16 25 0.0052 0.4 11.8 3.4 1 23 1009 1032 1009 1032 0.96

17 25 6.8 5.2e+02 2.0 1.5 1 23 1081 1104 1081 1104 0.92

18 25 0.083 6.4 8.0 0.0 2 23 1136 1158 1135 1158 0.94

19 25 0.029 2.2 9.4 1.8 1 23 1187 1209 1187 1209 0.97

20 25 2.5e-06 0.0002 22.2 2.0 1 23 1213 1235 1213 1235 0.99

21 25 1.9 1.5e+02 3.7 0.4 2 10 1242 1250 1241 1261 0.78

22 25 5.8e-05 0.0044 17.9 1.2 2 23 1306 1328 1305 1328 0.95

23 25 0.029 2.2 9.5 1.3 2 23 1335 1356 1334 1356 0.95

24 25 5e-06 0.00039 21.3 0.6 1 23 1362 1384 1362 1384 0.98

25 25 0.0052 0.4 11.8 3.4 1 23 1390 1413 1390 1413 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	4.3	3.3e+02	2.6	2.7	1	23	446	469	446	469	0.95
2	25	0.39	30	5.9	0.8	2	23	500	522	499	522	0.96
3	25	0.065	5	8.4	0.3	2	23	552	573	551	573	0.91
4	25	3.6	2.8e+02	2.9	4.2	1	23	577	599	577	599	0.92
5	25	0.099	7.7	7.8	3.3	3	20	612	629	610	630	0.93
6	25	7.6	5.8e+02	1.8	1.1	2	11	644	653	643	667	0.85
7	25	0.00079	0.061	14.4	1.7	1	23	674	696	674	697	0.96
8	25	0.011	0.85	10.8	1.7	2	23	706	726	705	726	0.96
9	25	0.064	4.9	8.4	0.3	2	23	752	774	751	774	0.92
10	25	0.0054	0.42	11.7	0.8	1	23	806	828	806	828	0.97
11	25	0.22	17	6.7	3.8	2	23	833	854	832	854	0.95
12	25	0.064	4.9	8.4	0.6	2	20	861	879	860	881	0.93
13	25	0.022	1.7	9.8	0.1	3	23	926	947	925	947	0.93
14	25	0.021	1.6	9.9	0.5	3	23	955	975	954	975	0.96
15	25	5.5e-06	0.00043	21.2	1.4	1	23	981	1003	981	1003	0.98
16	25	0.0052	0.4	11.8	3.4	1	23	1009	1032	1009	1032	0.96
17	25	6.8	5.2e+02	2.0	1.5	1	23	1081	1104	1081	1104	0.92
18	25	0.083	6.4	8.0	0.0	2	23	1136	1158	1135	1158	0.94
19	25	0.029	2.2	9.4	1.8	1	23	1187	1209	1187	1209	0.97
20	25	2.5e-06	0.0002	22.2	2.0	1	23	1213	1235	1213	1235	0.99
21	25	1.9	1.5e+02	3.7	0.4	2	10	1242	1250	1241	1261	0.78
22	25	5.8e-05	0.0044	17.9	1.2	2	23	1306	1328	1305	1328	0.95
23	25	0.029	2.2	9.5	1.3	2	23	1335	1356	1334	1356	0.95
24	25	5e-06	0.00039	21.3	0.6	1	23	1362	1384	1362	1384	0.98
25	25	0.0052	0.4	11.8	3.4	1	23	1390	1413	1390	1413	0.96

Sequence Information

Coding Sequence: atgtatttgcaTATCCTACATCACATAGCATACATTTATGGCAAGTCGTTTACCGCGCAGGCGGTTCTACTCTGGAATGCACTGCCACTTGACATCAAGAAAGCTCAGTCTGTtgaaagcttcaagactcagTTGCAAGACGACTCCCGCCTTCCGGACCGGATATGCCAAGTATGCATCACCAACCTGACCAGGTTCTCGGAGTTCCGGAGCATGGTGATAGAGACTCAGAAGAGACTGGTGGGGGCTGTGACGGGCGGAGTCAAGCTGCAGCCCAGGGGATCATCGTCGCCGGCGCCGACACCTGATCCACTAGCATTCCCAGAAGTGGAGATCAAAGTGGAGAGaccggatgatgatgatgatgatgaagctaatgatgatgatgaagataatGATGAAGATACTGATGATGCATACACAGAAGCCTCGTTTGACCAGAATGAAGATATGGAAGATCGGAAGGACATGGTGTTTAAGGATGGACTGTTGCCGGCTTTAGAtgATACAACACAAAACACACCCGATCCGCTCGAAGTGAATTCACCAACAGTGACATCGGAAGTCCAACCAAAGTTGCAGAAGATACTGGTTCAGATACCGAATCAGAAGAACCTCCCTGTCATGGCACCGGGACAAGCGCCTAAGAGACTCCGCCTGATCACACCCGATATGGCTACGAAATTGGGTCTAATACCCGTCCCATCAACATCAATGTCCCCATCAGAGCCAGCGTTGCAGCTGCGAGGCAACATGCAGCAGAACGTGAGAGTCATCCGCCTGCCTCGAGCCGTGCAACAGATGATGGCTAAACAAACCCACGCACAGGGGATACGGGCTATAGTGTGGTGGGAGgagacacacacatacacacacacactgcgAGGCGACATGCAACAGAATGTGAGAGTCATCCGCCTGCCTCGAGGCGTGCAACAGATGATGGCTAAACAAACCCACGCACAGGGGATACGGGCTATAGCTCCGACCTCGAACGTGCGTCTAGCGGTGGACGAGGCGGACGCCAGCAAGCAGACACAGATCTGCGTCAAGTCGGAGCCGGAGGCGAGCGCGGCCACAACCAGCACGCACTCTGCGGACCCGGACACATCAGAAACGGACGATGCCGAAGATATCAACCCTGGCGAAGACGACTCGAAGGAGAGACAGTCATCGGACACAACGGAAGAGGGAGCCAAAAAACGAGTATCGAGCGAGAGTTTAGAAATCGGTGGCGCCACAGTCAAAGCTACGCAGAAGAGCAGACTACGCGCTGACATTGTACAAACAGTACACAACACAAATATCATACCGTTCGTTCCTTACAAAACACAATTCAAATGCTTGTACTGTGACACTAGACATACAGACTTTCTCGCATTCAAAAACCACGTCCTGACCGACCATAAGAACGTATCCGAACTTACCATCTACAATAGCATGCTCACCCGCGCGTTCATACGAAATAATATGCTCCACGCAGACATTAGCGATCTCAAATGCACTATTTGTAACGACAACATCGACGATCTAAACTCACTCTTTCAACACATGAAGCGGAAACATTTCAAATTGTACTTTGACTTCTACGGTGAGGATTACAAAGGCCCGCCACACGGCATTCTAGGATTTCGACTCGAAAAAAAACCCTTGCAGTGTATTATTTGTAGCAAACAGTTCAAAACTTTTGGCCCCCTCAACACACACATGGCGGACCACTACGACTTTTTCTCCTGCCAATATTGCGGCAAGAAAATCATCTCGTATCGCACGCACAAAATACATACGCAGAAACATAAGATGGAATTGGAGAGCGGCAACTCGAAAACGAACTGCAAGTTTTGCGATAAAACTTTCAAATTCTCTCACGAGAGGACTAATCATTTGTACGGGTCGGCTAAGAATGCTCAAGGCACGCAAAGGCTACTCAAATGCTGCTACTGTCCCCAAACGTTTCCTTTAAAAGAATTCATTAAAATAGAACACATGAAGGTAAAGCACGGATATGTAAGAGGCGAGTTCAAATGCCAATTGTGCGATAAAGTGTACGAAATCAAACGCTCCCTGAAAATTCACATCGAGAATCATCACGCGGAGAATCGTGAAAAATGGACCGTTTGCGATAAATGCGGCTACATATGTCGCAAATATTACTTGATACGACATTTGGAATCACACGAAGATTTATACGACATTCTGGAAGGCGCATATTTTGAAAGGACCTGGCTCATTTACGCGGATATCACTGATATGAAATGCAAAATTTGCAACGAACCGTTCGTAGACGTAAGCGTGTTAGTCGACCATTTTAACCATGTCCATAGGAAGGTTTTCCAccatgtcaatgtcaaatatgaAAATGAATACAAAGGCCCTCCGTACGGGATCTTATGTTTTAGACTGGAGAAGGAACCGTTTGAATGCGTTGTCTGTAATAAACAAtttgacttaattaaaaatCTGCACGCCCATATGACGGAACATTACAGTACCTCTCAGTGCGAACATTGTGACATGAAATTCTTCTCGCGCTCAACGCGATACAATCACAGAATTTTGCATTTAAAAGAGGCAAAAATCAAATGTAGAGAGTGCGGTAAACTCTTTCAATATCTGAAAGCGCTGCAGGCGCATAAACACCAGATTGTCGAACATCGGAAAGGAGTCGTAAGTAAACAAATGAAATGTTGTTACTGCCCAGCATTATTCGAATGTGAAAAAATGAAACGCGGGCACGTTGAAAAAGAGCACGGAATTTTCAAACCAAAGGTTGCCTGCCCAGCTTGCGATAAAGTATTCAACAATATTGGTGCTTATAAACAACACAAGTATCGCTGGCACAAGCCACGGAAGCCAAACATGTGCGACCTATGTGGCTTTATAACGTACAGCAAGTCGTTCCTAACTCAACACCTGGAATCGCATGCCGGCGTTAGAAACTTTGAGTGCGACTTGTGTCGGAAGAAGTTTAGGACTAGAGGATCGTTACAGTTACATATGAGAGGGCATTATAATGATAAAAGGTTTGCGTGTAGTTTGTGCGATGCGGCGTTTATACAGAAACATTGTTTGAAGAGTCACGTGAAGTCGAAACATCCAGATTCGGcTGCGTCTCAATTCTTAAAAATCGGCATTGCCGGACACCAATTCTTCCTGAAGAAACTACTCCGAGACGATATAATCCAAATAGTACAAAACTCCACCATAATACCCTTCACACCTTATAACAACTACAGCAGTTATAAATGTCTATATTGTCCAGTGAAAGAGAATGATTATCCGACATTTAAACGGCATTACACGAAGGAGCATAATGTGGATTTGGTAGATTCCGATGTGTATAAAGCGTTAAGAGCGAGATTTTTCGATCAATACTGTCTCGTGCACGCCGATGTTACTGATGTAAAGTGCAAAATTTGCGCGGAACCGTTTGTAGATATCACTGCTTTAGCGGAACATTTGAAGTTTGAACATGATAAAGTTTTTAATACGGTGAAAGGAGAAAAGTGTGAGTACCCTCCGTATGGTATACTATGTTTTAGACTGGAGACCGAACCGTTTGAGTGCGTTGTGTGTAGTAAACAGTTCAATCTATTCATTCAACTACATACCCATATGAACGAACATTACAGCACGTTCCAATGCCAAGATTGCGATAAGAAATTCTTCTCCTACTCTGCATTGTTCGCTCACATGAAATCTCACGAGAAAAAAGCGAGCATCAAATGCAAAGATTGCGGCAAACTATTCCTGTATTTGACGGACAAACGTTCGCATCAGTTTAATGTTATCGAACATAAGAACGGCGAGAAAAGCACACAAATGAAATGCTGCTATTGCCCAGCTCTGTTTGAAACTAGGGTCCTGAAAAAAGAGCACGTCGATAAAAAACATGCAACGAAAAAGCCAAAACTAACATGCCCAGTTTGTCATAAAGTGTATACCAACAAAGGTGCGCTCAGATCGCACAATAAGAGGTGGCATATGCCTAGACAACAATGTATATGTGACATGTGTGGCTTCACAACCTACGATAAGAGATTCCTAGCTCAACACATCGAATCTCACTCGGGCATTAGAAAATTTGAGTGCGAGATCTGTCGAAAGAAATTCAGAAGTAAAGGTACTTTGGCAGTACACATGAAAGgtcataataatgataaaaggtTTGCGTGTAGTTTGTGCGATGCAGCGTTTATACAGAAACATTGTTTGAAGAGTCATGTGAAGTCGAAACATCCTGAGTCGGGCGTTGATATCAATTGA
Protein Sequence: MYLHILHHIAYIYGKSFTAQAVLLWNALPLDIKKAQSVESFKTQLQDDSRLPDRICQVCITNLTRFSEFRSMVIETQKRLVGAVTGGVKLQPRGSSSPAPTPDPLAFPEVEIKVERPDDDDDDEANDDDEDNDEDTDDAYTEASFDQNEDMEDRKDMVFKDGLLPALDDTTQNTPDPLEVNSPTVTSEVQPKLQKILVQIPNQKNLPVMAPGQAPKRLRLITPDMATKLGLIPVPSTSMSPSEPALQLRGNMQQNVRVIRLPRAVQQMMAKQTHAQGIRAIVWWEETHTYTHTLRGDMQQNVRVIRLPRGVQQMMAKQTHAQGIRAIAPTSNVRLAVDEADASKQTQICVKSEPEASAATTSTHSADPDTSETDDAEDINPGEDDSKERQSSDTTEEGAKKRVSSESLEIGGATVKATQKSRLRADIVQTVHNTNIIPFVPYKTQFKCLYCDTRHTDFLAFKNHVLTDHKNVSELTIYNSMLTRAFIRNNMLHADISDLKCTICNDNIDDLNSLFQHMKRKHFKLYFDFYGEDYKGPPHGILGFRLEKKPLQCIICSKQFKTFGPLNTHMADHYDFFSCQYCGKKIISYRTHKIHTQKHKMELESGNSKTNCKFCDKTFKFSHERTNHLYGSAKNAQGTQRLLKCCYCPQTFPLKEFIKIEHMKVKHGYVRGEFKCQLCDKVYEIKRSLKIHIENHHAENREKWTVCDKCGYICRKYYLIRHLESHEDLYDILEGAYFERTWLIYADITDMKCKICNEPFVDVSVLVDHFNHVHRKVFHHVNVKYENEYKGPPYGILCFRLEKEPFECVVCNKQFDLIKNLHAHMTEHYSTSQCEHCDMKFFSRSTRYNHRILHLKEAKIKCRECGKLFQYLKALQAHKHQIVEHRKGVVSKQMKCCYCPALFECEKMKRGHVEKEHGIFKPKVACPACDKVFNNIGAYKQHKYRWHKPRKPNMCDLCGFITYSKSFLTQHLESHAGVRNFECDLCRKKFRTRGSLQLHMRGHYNDKRFACSLCDAAFIQKHCLKSHVKSKHPDSAASQFLKIGIAGHQFFLKKLLRDDIIQIVQNSTIIPFTPYNNYSSYKCLYCPVKENDYPTFKRHYTKEHNVDLVDSDVYKALRARFFDQYCLVHADVTDVKCKICAEPFVDITALAEHLKFEHDKVFNTVKGEKCEYPPYGILCFRLETEPFECVVCSKQFNLFIQLHTHMNEHYSTFQCQDCDKKFFSYSALFAHMKSHEKKASIKCKDCGKLFLYLTDKRSHQFNVIEHKNGEKSTQMKCCYCPALFETRVLKKEHVDKKHATKKPKLTCPVCHKVYTNKGALRSHNKRWHMPRQQCICDMCGFTTYDKRFLAQHIESHSGIRKFECEICRKKFRSKGTLAVHMKGHNNDKRFACSLCDAAFIQKHCLKSHVKSKHPESGVDIN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -