Basic Information

Insect: Macaria liturata
Gene Symbol: -
Assembly: GCA_964023185.1
Location: OZ026829.1:2400946-2410499[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 0.021 1.7 9.9 1.6 3 23 205 226 203 226 0.96

2 28 0.00072 0.055 14.5 0.5 2 21 264 283 263 284 0.93

3 28 5.8e-05 0.0045 17.9 0.6 2 23 320 342 320 342 0.97

4 28 0.00056 0.043 14.9 0.4 1 23 405 428 405 428 0.97

5 28 0.0089 0.69 11.1 0.1 1 23 444 466 444 466 0.96

6 28 0.00043 0.033 15.2 1.3 1 23 511 533 511 533 0.97

7 28 4.1e-05 0.0032 18.4 1.7 2 23 575 597 574 597 0.97

8 28 7.1e-05 0.0055 17.7 1.9 1 23 647 670 647 670 0.97

9 28 0.012 0.93 10.6 0.2 1 23 728 750 728 750 0.97

10 28 0.00019 0.015 16.3 3.6 2 23 762 783 761 783 0.96

11 28 0.0029 0.22 12.6 0.3 2 23 795 816 794 816 0.96

12 28 0.0032 0.25 12.4 2.2 1 23 826 848 826 848 0.98

13 28 0.31 24 6.2 3.6 2 23 875 896 874 896 0.95

14 28 0.00067 0.052 14.6 2.6 1 23 907 929 907 929 0.97

15 28 0.0027 0.21 12.7 0.7 1 23 937 959 937 959 0.98

16 28 8.6e-05 0.0066 17.4 0.3 2 23 979 1001 978 1001 0.97

17 28 0.14 11 7.3 1.1 1 23 1019 1041 1019 1041 0.93

18 28 0.63 49 5.2 2.9 1 23 1048 1070 1048 1070 0.94

19 28 0.32 24 6.2 2.5 2 23 1081 1103 1080 1103 0.90

20 28 0.049 3.7 8.7 0.1 2 23 1126 1147 1125 1147 0.95

21 28 1.9 1.5e+02 3.7 3.0 2 23 1190 1212 1189 1212 0.95

22 28 0.074 5.7 8.2 0.4 2 23 1228 1249 1227 1249 0.91

23 28 0.017 1.3 10.2 2.0 5 23 1259 1277 1257 1277 0.94

24 28 0.0017 0.13 13.4 3.2 1 23 1287 1310 1287 1310 0.96

25 28 0.14 11 7.3 0.4 2 23 1327 1345 1327 1345 0.85

26 28 1.7 1.3e+02 3.9 2.1 2 20 1349 1367 1348 1369 0.91

27 28 0.048 3.7 8.8 0.7 2 23 1418 1439 1417 1439 0.94

28 28 0.004 0.31 12.1 1.1 2 23 1450 1472 1449 1472 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	0.021	1.7	9.9	1.6	3	23	205	226	203	226	0.96
2	28	0.00072	0.055	14.5	0.5	2	21	264	283	263	284	0.93
3	28	5.8e-05	0.0045	17.9	0.6	2	23	320	342	320	342	0.97
4	28	0.00056	0.043	14.9	0.4	1	23	405	428	405	428	0.97
5	28	0.0089	0.69	11.1	0.1	1	23	444	466	444	466	0.96
6	28	0.00043	0.033	15.2	1.3	1	23	511	533	511	533	0.97
7	28	4.1e-05	0.0032	18.4	1.7	2	23	575	597	574	597	0.97
8	28	7.1e-05	0.0055	17.7	1.9	1	23	647	670	647	670	0.97
9	28	0.012	0.93	10.6	0.2	1	23	728	750	728	750	0.97
10	28	0.00019	0.015	16.3	3.6	2	23	762	783	761	783	0.96
11	28	0.0029	0.22	12.6	0.3	2	23	795	816	794	816	0.96
12	28	0.0032	0.25	12.4	2.2	1	23	826	848	826	848	0.98
13	28	0.31	24	6.2	3.6	2	23	875	896	874	896	0.95
14	28	0.00067	0.052	14.6	2.6	1	23	907	929	907	929	0.97
15	28	0.0027	0.21	12.7	0.7	1	23	937	959	937	959	0.98
16	28	8.6e-05	0.0066	17.4	0.3	2	23	979	1001	978	1001	0.97
17	28	0.14	11	7.3	1.1	1	23	1019	1041	1019	1041	0.93
18	28	0.63	49	5.2	2.9	1	23	1048	1070	1048	1070	0.94
19	28	0.32	24	6.2	2.5	2	23	1081	1103	1080	1103	0.90
20	28	0.049	3.7	8.7	0.1	2	23	1126	1147	1125	1147	0.95
21	28	1.9	1.5e+02	3.7	3.0	2	23	1190	1212	1189	1212	0.95
22	28	0.074	5.7	8.2	0.4	2	23	1228	1249	1227	1249	0.91
23	28	0.017	1.3	10.2	2.0	5	23	1259	1277	1257	1277	0.94
24	28	0.0017	0.13	13.4	3.2	1	23	1287	1310	1287	1310	0.96
25	28	0.14	11	7.3	0.4	2	23	1327	1345	1327	1345	0.85
26	28	1.7	1.3e+02	3.9	2.1	2	20	1349	1367	1348	1369	0.91
27	28	0.048	3.7	8.8	0.7	2	23	1418	1439	1417	1439	0.94
28	28	0.004	0.31	12.1	1.1	2	23	1450	1472	1449	1472	0.96

Sequence Information

Coding Sequence: ATGGCCCTCAAACTTGGAAAATGTCGATTATGTCTCAAACTCGGCGACTTTTACTCCATCTTCACAGTCGACAATGCGATCCAGCTTTCGGAGATGGTCATGGAATGCACGAGGATAAAAGTATATGATGGAGATGGATTACCTGACAAAGTATGTGCGGAGTGCATCCAGAAGCTCAGCAGTGCGTACATCTTCAAACAGCAGTGCGAGAGAGCTGATCAGGAGCTGCGGAGGAACTATGTGCCACCACCAGGATTCAGTATCAGTCCTCCGCCACCAAACAGGCAAAGTAGTGACTCTGCATTCTCCACTCACACAGACAGCTCCAACTTGAAATCATCTTTCATTGAGAGCAAGGTGACTCCTGCCAACAGAAGTAGAAAGAGAAGTATTGAGAGTGACAACGCGTCCGAGGCGAGTCACTCCGTCGACTATGGCAGACCCACGGGCTCTAAAAGAGTAGAAGAGTTGCGCCGCACACAAAAACGCGCGCGGATCTCCGCCAATAACTCGCAATGCGACTCCGACTACGAAGACAATGGAGGCTCCAGCTATGTACCAGAAACAGATATAGACTCAGACGAGCCTATCATCAAACTCAACCCATTTGGATGCGACTTCTGCAGCAAATCATTCAAATGGAAGAAGAGTTTGAAGATCCACCTAAAGAATATCCACGGAAAAAATGAAAGCTTTAATTCGTCAGCTAACGCGTCTGCAATCGCCGCCGCGAGCACGCCGACAATCAAGGCAAATACTTcaatggatgatgatgaagaagaaAAGCTCAGCTGCTCGAAATGTGACCGGAGCTTCAAACTCAAGATCATGCTCAAAAGACACATAGAATCTTGCACTGGGCCAGTGGAAACACCCATAGTAAATACGCCGCAAAAGGAGCTTCTGATCTCTTTGGAGCCAATCGACGCCGTACATAAAATCACAGTAAAGAAACCGACATGCGAATACTGTACGGCCAAGTTTAAAACCATGGATAATCTCGAAAAACATCTGAGGGTTGTTCATGCTGCAGTTTTGAAGAAGGAGATGGCAGCTAAGGAGATAAAAGCGGGGCCCAAACCAAGTCTCAAACTCAAGGGAAGTTCTGGCTCGATCCGTCTTCCTTGCGTGTACTGTGAGGAGACATTCGAAGATTACTACGTCCACCAGTCGCACTTCAACACGTGCCCGCAAAAAGATTCGAGATCCATATTCGAGTGCCCGATATGCCAGAAAGTGTCTAGTCGGAAGAATGGCTATTTCCTCCACATCAAGAACATACACTTCGAGCCGCTCGCCAGCCCGCCGCCCGGCTCTCAGGACTCTTCTTTTGAATGCCGCATCTGTAGCAAGAAGCTCGCGTCTCAGGATATGCTCGTCACGCACTTGGCCGCGCATGCTTCCAATATAGACAACGACGAACAGGATGACAATGACAATGATAATGGTGATATGCACGACGATGGAGATTCAAGACCCAGTACATTTGGAGATTCAGCTTCAGTACTGAGCCAACCTGCCAGTGGTTCGTTCAACTGCCGCGTTTGTGACAAAGAGTTCAAGTATCGCAAAGCTCTCATTACGCACGAGATGAGACATGCAGAGGACGAGGCGAGGGTGAAGAATGAACCTCCGGACAAACCCTCGATGAGCTTACTGAGCGAGACACAGAGAGACTCGGACTTTGAATCTAGTCAAGACGATGAAGAGGCAGATGACCTGACTTGTGACATCTGCGAAAAGATGTTCTCATACAAACGACTCCTAGAGCAACACAAGCGCACAAAACATAACATGTCCTCAGGCACGAAGCGAGCGAAAATAAACCTTAAAGACTGCACCGTGAAGTGCTTGCTCTGCGATGTGGAGATGAAAGTGAGCGATATCAATGAACACAATCAACAACACATTTCAAAGAACATCAAGCCGAGGAATATCTACACTTGTGCCGAGTGCAGCCAGAAGTTCAAGAGCTGCAGCAATCTGGCGAATCATATTAAACTGGTTCATAGACTGAAGCAGAGCAAGGAGCAGGTGCCGCGCCAGTTCCTGGGCGCGCAGATCGCGGATTTTTGTGAGGTCGTTGTGACGAAGGCGGAACCGCTGGACCAAGTCCAGAGTCACAACGGCAATAGTGACGAGGTTCCGTCGCAGACGGGTGCATCGGTAGACCTGAGCGGGTTCTCGTGCCCCGTGTGCAGCAAGAAGATGCCCACCCTGATCTCCCTCAAGCGGCACGTCAACTGGCACTCCAACGTGGGGGACCACATTGAGAAGAAGCAGGAGTGCTTCGTGTGTAAAGAGACGTTCCGTTTCAAGAGCCACTTCCGCGTGCACATGCGCGCGCACTACCACGACACGTCGCTGGACCCGGCGCTGCTCGTGTGCCCCATCTGCGGGCGGCGCTCCAAGCACCTCCGCGCCGCGCAGGCGCACATGAACTACCACAAGCAGACCCGCTTCCAGAACAAGGACTACCAGTGCTCCATCTGCAAGCGCGTCTTCCAACACAGGAAAGTATACCTCTCGCACATGGCGGTCCACTACAAGAAGGGCGAGAGTGCCATGAACACTGTCGTAGGTGACGGGAGTTTCAACACGCAGCCCTCGGATGGGACGTCCTCGTGTCATTTGTGTGGGAAAGTATGCTTGTCTGAGGTATCGTTGAAGCATCACCTGATCTGGCACAAGTCGAAGACGCTGTTGTACGGAGCGCGGCACGAGTGCGAGGTGTGTCAACTGCAGTTCACCAATAAAAGACATCTAGAGCTGCATGTGCGCGCGCATTACGAGGATGATAATGGCCCGTTCAAATGCACGGTGTGCGGGAAGGGTTATTTGGATGAAGATTACATGAAGCGGCACGTGAAGTCGCACAACTTCGATCACATGTCGCACAAGAAGCGCATCGAGCGCCTGCGCCGCGACAAAGTGAAGTGCCCCATCTGCCCGAGATACTACCCCGACCTGGTGCACCTCATCCGCCACCTGCGCCGCACGCACCCTGAGTCCAAGATGATCAAGCAGGACCCCGACGCTCCCCCGCCCGCCGTCTTCTGTTGCAAACTCTGCGCTAAGATCTTCGGCACCGAAGCGCGACTTCGCAAACACGAGGAAGCTCATCTCCGCAAACCGAACTTCTTCCGCTGCAAGTTCTGTGGCAAGAAGACGATCTCTCTCAAAATGCACAATGTGCACATCAAGGGACATTTGACGCGCAAGTTCGTGGAAAATCCGCTGAAATGTCCGCATTGTGAAGAAACTTTCGTATGGGGCTACGCATTGCATCACCACTTACGTGACACGCACGATGTCAACGAGACCTGGATAGCCGAGCGAGCCGACGCACCTCTCGAGGGTCCGCTAAAAGAGCTACAGTGCgcaatttgtatgaaagtgcTCGCCAGTAAGGGCAATTTCGAACGACATCTCGATTATCACAACTCGCTGCGTTGTAACTATTGTGGTGATTATTTCGGCGGTCTGCGCTTCCTCGAGGGACATTTAGCCTTCGGCTGCGAGAAAAAGAAACTAGTCGGAGAGACGGAGCCCCATGCACGCCGCGTCAAGTGCGAAATCTGCTACAAACCTTTCCATGTGCAAGTAAAACTGGACTGTCACCTGCGTACGCAGCACGGTATCTCAGTAGACCGTAGCGCCTCTCAAGCTTCCCAGGATACTGTATGTGACTTCTGCTTCCGAACCTTCGAGAACCAGTACGCGCTCGCCGGGCACAAGGGCTACCACCGCACTGTGGGCTACTTTGGCTGCATCTACTGCCCGAGGAAGTTCAACACGCGCTCCGCATACAACAAGCACAAGAAAAATCACATCAACTCTATGAACGTAGACGAACCATACAAGTGTGAACACTGCGATGAAACTTACGTACACTTCAGAGACATGATCAATCACATGAAGGACGACCACGGAGATGATAAGGATTGGATCACAATGCCCAAAGAAGCAATAGAAGAAGAGTGTCCAATCTGTAAGAAAGTGTTCATCAACGTACAAAGGCACATACAGTATCACGAGGAAAACAAGTGCAAGAAATGTAACGAATACTTTTACTCTCGAACCGACTTCGACGGTCATTTGTGCGCCATCGAGAGCGATGCAGAAGAAGAGACACTCATCGGAGATATACCAGCGAAAGTGTACGAGGAATGCGTCTTCTGTTTCAAGCCCATCACTAAAAAGGACTCGAAGAAAAAGCACGATATTCTCCATCACGTGTCTGGCGCGATTTCGTGTCGCTTCTGCGATCTCAAGTTCAAGACTTTAGACGCGTTCAACATCCACGCGTTCTCTCATCGCAGTCGGAAATACGTGAAGCGGCCGATCAAATGCCGCGTGTGCAAGGAGCGATTCGTCAAATACGGCTTGTTTATGAAACACATGAAGAATGTGCACAAATCTACGAAGAAGATGCATTACCGGGCCACGGTGAAACGAGAGCGGTGCGTGGTCTGTGGGGAGATGTTACCAAACTTGCACAATCACTACCGCGCGCATCTGACCAACCGCTGCCAGCAGTGCTTGAAATACCTTGCCTCGTCTCGGCTATTCTCCAAACATCAGTGCGACCAAGAAGACGCGGACCCGACTAAAGTGTTCGAATCCGACGCAGATCTGCCCGCCCTCATAAAATCCTATATGCCCAAAGACGAACGCGACGACGAAAAGTTCTACGGATACACGGACGAAGAGGAAGAAGCAGAAATCGCGGCACAAGCAGAAAAAGAGGCCGAAGAAGCCCTGGCCCTGGCTGCTCAAAAACCTAAACTCATTAAGACCTATTCGCGTCCCAAACCGAAGCCCAAAACGCCTCTTGATAGACAGTTAGCAGAAGATGAACGCAACTTGCACATGATGGTGCAATCGCCGATCATATCTGATGTATTGTCGTTGTATCAGAAAGTGGAAGTGGATGGTGATTCAAAGAGCCAGTCGAGCAAGTTTGGTGACATTGTGGATCTAAGCGATGATTCTTTGGACGCGACAGATCTAAACCCACCTGTCATTGTTGTGGATGATGACTCTAGTTAA
Protein Sequence: MALKLGKCRLCLKLGDFYSIFTVDNAIQLSEMVMECTRIKVYDGDGLPDKVCAECIQKLSSAYIFKQQCERADQELRRNYVPPPGFSISPPPPNRQSSDSAFSTHTDSSNLKSSFIESKVTPANRSRKRSIESDNASEASHSVDYGRPTGSKRVEELRRTQKRARISANNSQCDSDYEDNGGSSYVPETDIDSDEPIIKLNPFGCDFCSKSFKWKKSLKIHLKNIHGKNESFNSSANASAIAAASTPTIKANTSMDDDEEEKLSCSKCDRSFKLKIMLKRHIESCTGPVETPIVNTPQKELLISLEPIDAVHKITVKKPTCEYCTAKFKTMDNLEKHLRVVHAAVLKKEMAAKEIKAGPKPSLKLKGSSGSIRLPCVYCEETFEDYYVHQSHFNTCPQKDSRSIFECPICQKVSSRKNGYFLHIKNIHFEPLASPPPGSQDSSFECRICSKKLASQDMLVTHLAAHASNIDNDEQDDNDNDNGDMHDDGDSRPSTFGDSASVLSQPASGSFNCRVCDKEFKYRKALITHEMRHAEDEARVKNEPPDKPSMSLLSETQRDSDFESSQDDEEADDLTCDICEKMFSYKRLLEQHKRTKHNMSSGTKRAKINLKDCTVKCLLCDVEMKVSDINEHNQQHISKNIKPRNIYTCAECSQKFKSCSNLANHIKLVHRLKQSKEQVPRQFLGAQIADFCEVVVTKAEPLDQVQSHNGNSDEVPSQTGASVDLSGFSCPVCSKKMPTLISLKRHVNWHSNVGDHIEKKQECFVCKETFRFKSHFRVHMRAHYHDTSLDPALLVCPICGRRSKHLRAAQAHMNYHKQTRFQNKDYQCSICKRVFQHRKVYLSHMAVHYKKGESAMNTVVGDGSFNTQPSDGTSSCHLCGKVCLSEVSLKHHLIWHKSKTLLYGARHECEVCQLQFTNKRHLELHVRAHYEDDNGPFKCTVCGKGYLDEDYMKRHVKSHNFDHMSHKKRIERLRRDKVKCPICPRYYPDLVHLIRHLRRTHPESKMIKQDPDAPPPAVFCCKLCAKIFGTEARLRKHEEAHLRKPNFFRCKFCGKKTISLKMHNVHIKGHLTRKFVENPLKCPHCEETFVWGYALHHHLRDTHDVNETWIAERADAPLEGPLKELQCAICMKVLASKGNFERHLDYHNSLRCNYCGDYFGGLRFLEGHLAFGCEKKKLVGETEPHARRVKCEICYKPFHVQVKLDCHLRTQHGISVDRSASQASQDTVCDFCFRTFENQYALAGHKGYHRTVGYFGCIYCPRKFNTRSAYNKHKKNHINSMNVDEPYKCEHCDETYVHFRDMINHMKDDHGDDKDWITMPKEAIEEECPICKKVFINVQRHIQYHEENKCKKCNEYFYSRTDFDGHLCAIESDAEEETLIGDIPAKVYEECVFCFKPITKKDSKKKHDILHHVSGAISCRFCDLKFKTLDAFNIHAFSHRSRKYVKRPIKCRVCKERFVKYGLFMKHMKNVHKSTKKMHYRATVKRERCVVCGEMLPNLHNHYRAHLTNRCQQCLKYLASSRLFSKHQCDQEDADPTKVFESDADLPALIKSYMPKDERDDEKFYGYTDEEEEAEIAAQAEKEAEEALALAAQKPKLIKTYSRPKPKPKTPLDRQLAEDERNLHMMVQSPIISDVLSLYQKVEVDGDSKSQSSKFGDIVDLSDDSLDATDLNPPVIVVDDDSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -