Basic Information

Insect: Macaria liturata
Gene Symbol: -
Assembly: GCA_964023185.1
Location: OZ026809.1:11570866-11592813[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 30 2.1 1.6e+02 3.6 1.3 3 23 20 40 18 40 0.97

2 30 1e-05 0.00079 20.3 0.2 1 23 107 129 107 129 0.98

3 30 0.05 3.9 8.7 0.8 1 23 133 156 133 156 0.96

4 30 0.098 7.6 7.8 4.4 1 23 163 186 163 186 0.95

5 30 0.0017 0.13 13.3 1.5 1 23 191 214 191 214 0.96

6 30 0.043 3.3 8.9 0.3 1 23 220 243 220 243 0.95

7 30 0.00019 0.015 16.3 0.5 1 23 249 271 249 271 0.98

8 30 0.00014 0.01 16.8 0.9 1 23 277 299 277 299 0.99

9 30 0.014 1.1 10.5 1.9 3 23 350 370 348 370 0.98

10 30 0.034 2.6 9.2 0.2 2 23 397 418 396 418 0.95

11 30 0.001 0.079 14.0 0.1 1 23 439 461 439 461 0.95

12 30 0.0035 0.27 12.3 0.1 1 23 465 488 465 488 0.96

13 30 1.4 1.1e+02 4.2 0.1 1 23 529 552 529 552 0.92

14 30 3 2.3e+02 3.1 0.0 2 23 576 598 575 598 0.91

15 30 9.3e-05 0.0072 17.3 0.5 2 23 620 641 619 641 0.97

16 30 0.014 1.1 10.4 1.1 2 23 646 667 645 667 0.92

17 30 0.0024 0.18 12.9 1.1 1 23 674 697 674 697 0.97

18 30 0.29 22 6.3 4.2 1 23 702 725 702 725 0.97

19 30 0.2 16 6.8 0.1 3 23 831 852 829 852 0.94

20 30 0.18 14 7.0 6.7 1 23 874 896 874 896 0.96

21 30 0.00038 0.029 15.4 0.9 1 23 900 922 900 922 0.98

22 30 0.00057 0.044 14.8 1.1 1 23 927 950 927 950 0.95

23 30 0.00042 0.032 15.2 2.1 1 23 956 979 956 979 0.98

24 30 0.049 3.8 8.7 1.3 1 23 986 1009 986 1009 0.95

25 30 0.0015 0.12 13.5 1.5 1 23 1015 1037 1015 1037 0.95

26 30 1.4 1.1e+02 4.2 0.7 1 23 1148 1170 1148 1170 0.96

27 30 0.7 54 5.1 0.1 2 23 1195 1217 1194 1217 0.94

28 30 9.6 7.4e+02 1.5 0.1 1 12 1243 1254 1243 1259 0.86

29 30 0.022 1.7 9.8 1.4 1 23 1301 1323 1301 1323 0.98

30 30 0.0029 0.22 12.6 0.2 2 23 1351 1373 1350 1373 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	30	2.1	1.6e+02	3.6	1.3	3	23	20	40	18	40	0.97
2	30	1e-05	0.00079	20.3	0.2	1	23	107	129	107	129	0.98
3	30	0.05	3.9	8.7	0.8	1	23	133	156	133	156	0.96
4	30	0.098	7.6	7.8	4.4	1	23	163	186	163	186	0.95
5	30	0.0017	0.13	13.3	1.5	1	23	191	214	191	214	0.96
6	30	0.043	3.3	8.9	0.3	1	23	220	243	220	243	0.95
7	30	0.00019	0.015	16.3	0.5	1	23	249	271	249	271	0.98
8	30	0.00014	0.01	16.8	0.9	1	23	277	299	277	299	0.99
9	30	0.014	1.1	10.5	1.9	3	23	350	370	348	370	0.98
10	30	0.034	2.6	9.2	0.2	2	23	397	418	396	418	0.95
11	30	0.001	0.079	14.0	0.1	1	23	439	461	439	461	0.95
12	30	0.0035	0.27	12.3	0.1	1	23	465	488	465	488	0.96
13	30	1.4	1.1e+02	4.2	0.1	1	23	529	552	529	552	0.92
14	30	3	2.3e+02	3.1	0.0	2	23	576	598	575	598	0.91
15	30	9.3e-05	0.0072	17.3	0.5	2	23	620	641	619	641	0.97
16	30	0.014	1.1	10.4	1.1	2	23	646	667	645	667	0.92
17	30	0.0024	0.18	12.9	1.1	1	23	674	697	674	697	0.97
18	30	0.29	22	6.3	4.2	1	23	702	725	702	725	0.97
19	30	0.2	16	6.8	0.1	3	23	831	852	829	852	0.94
20	30	0.18	14	7.0	6.7	1	23	874	896	874	896	0.96
21	30	0.00038	0.029	15.4	0.9	1	23	900	922	900	922	0.98
22	30	0.00057	0.044	14.8	1.1	1	23	927	950	927	950	0.95
23	30	0.00042	0.032	15.2	2.1	1	23	956	979	956	979	0.98
24	30	0.049	3.8	8.7	1.3	1	23	986	1009	986	1009	0.95
25	30	0.0015	0.12	13.5	1.5	1	23	1015	1037	1015	1037	0.95
26	30	1.4	1.1e+02	4.2	0.7	1	23	1148	1170	1148	1170	0.96
27	30	0.7	54	5.1	0.1	2	23	1195	1217	1194	1217	0.94
28	30	9.6	7.4e+02	1.5	0.1	1	12	1243	1254	1243	1259	0.86
29	30	0.022	1.7	9.8	1.4	1	23	1301	1323	1301	1323	0.98
30	30	0.0029	0.22	12.6	0.2	2	23	1351	1373	1350	1373	0.96

Sequence Information

Coding Sequence: ATGATTTTGGAGTTTTCCAACGCGTGCTCGTTCTCGTTCCATCGCAGCTCCTTCGGATGCATGCACTGCACGTTTAAATCGCCAGATTTTAGCGCAATCAAAAGCCACATGCAGATCCATAAAGACCGCGCCGAGGCCGTCCGTAACGTGGACCGCGCTGGCATCTGCAAGGTGGATGTCACCGGTCTTAGGTGCCTCCTCTGCCAATACCCTATGGAAAACATTGCCAAGCTATTCGAACACCTCATAGTGACACACGACAAGCCATTGAACAGAAAACTAAACACCGGTCTGATTCCTTATCTCATAAGTGACAGCTATGTTTGCGCCGACTGCGGCGTCGCCTTCGAAACGTTTCGAAACTTGAACCAACACATGAATAAGCATTATCAACACTTCAAATGCCCTATATGTAGCGAAGGCTTCATATGCGAGTCACGCTTCAAAGCTCACATCAAATTGGTGCATcaaaaaatcaagaaaaatcACAAGTGTCCCATGTGCGAGGAAAGTTTCCACAGTTACAACCAGAAGAAGAGTCACATGGTGTCCAGCCACGCTGTTCTACCTCACAAGTGCCCGTACTGCGACGAGGCTTTCAAAACATATCGTGCTCGAGTGATACATCTGAATAAATCCCACGACAAGGACATTAGATATCCTTGCTCTTTGTGTGATAAAGTGTATTTTCTTGCCTCGGAACGCTCTTACCACATGCAGAATGTCCACGTGCGTGACAAACGATACGTGTGCTCGATATGTGGAGAGACCTTCAGTTTTGCCAACATCCTCTACAAACATATGCAAAAACATAACACTGAAAAGGTATACAAGTGCGATGCATGCACGAAAGCATTCGCCAGAATGAAATCATTAAGGACACATTTGAAAATTCATAATGATGAAAAGGATTTCGTGTGTGTGCGTTGTGAGACCGGCAAACGGAGGCTGAAAATCGGGGAGTATCACGACGCACGCGACAATGCCGCTCTTATACTAGAATATTCTAACGTGTGCCCTTTCAAATGGCGGAAAAACGTTTTCGGTTGTCCCTACTGTAGTTTCACGTGCCCCGATTTCGACTCGTTTAAGACTCACATGGAAAGTCATCCGGTCAAATCGGAACGGGTCGAGTTTTTACGCAACTCGAGACCCGCCGATATCGTCAAAGCGAACGTGTGTAATTTACAATGTGACATCTGCCATGAAAGTATCAAAGATGTGTCGACTCTTGTGGACCATCTTAGCGATCACGGCAAGCCTATTGTGAAGAAATACGGGTCAGGCGTCGTACCGTATTTATTAGACAATGGTTTCATATGCGCTTACTGCGGCGAATCGTTTGACCGATTCATCTTGTTGAATAATCACGTCATTCAGCATAAACTGAACTTCGCTTGCCCTCAGTGCGGACAATACATGTCCAGTCCGGAAGGATTAAGGAAACATATTCTCCGACGCCACGTCAGGACTCCGAGGACCAAATTCCGACCAAAATTAAGTGACTATAACGACGCCAGACACAACGCTTCGATCATTCTCGAATGTTCCAACGTGTGTCCTTTTAAATGGCATCGAAATGTTTTCCGGTGCGGTTATTGTGATTTCAAATCCGCTGATTTCGCTCCTATAAGGATACACATAAACAACGTCCATCCGAAACGCCTCGAAGCGCTGCACTACTCTAGACCTACGGAAATATTCAAAGCTGACGTTACGAATCTCAAATGCGTGTTGTGCGATCTAAACGTGGCAGACATGAAAGAACTAATCGATCATTTGAGCGATGTACATAAAAAGACGATCATAAAACATTACGGCGCCGGCATAGTTCCATTCCTGCTATGCAACGGCTTGCAATGTGCAGACTGCGGCAAGAGTTTCGACAGATTCATGAAACTAAACATACATGTAAATAAACACTATCCGAATTGCATTTGCTCGCAATGCGGCCAGGCGTTTTCGAGCGAGAATAGACTGCGCGCGCATTCCgaacaacacaaaaagaagGTTTTACACTTCAAATGCGGAACTTGCGGCGAAGTTTTTAACTCACGGTCCATAAAACAAAAGCACATGGAAACGAAACACGATATTTTACCACACAAATGTCCGTATTGCAATGACGCGTTCAAATCCTACGCTCACAGATTATTGCACTTAAACAAATATCACGgaaGAAAAATCGCCGTAATTGAGATAAAAGAGGAGGCGGTGTCGGATGCTGAGAACGATTTAGTTCCCGCGGAGGCCACAGATGGCGCCCAGCGCCGGGCCACCTTCAGAAACAACATCACCACGATACTGCAAACAACCACCGCCTACCCATTCAAATACAGGAAAGGCACCTACCTATGCTTCTACTGTAAAAACACATTCCTAGAACCGGAGAAACTGCGAGAGCACAACACTGTACAACATTCTGAAGCGAACCAGTTCCTGAAGCCACGAAAATATGAGCCCCTAAAAATGGACTTCGCAAACATCATCTGCAAGCTTTGCAATATAAGTATAGAGAACTACGTAACTTTGAAAGCGCATTTGACGGTCGAACACGGGAAAATTATCGACTGCACTTGGGGGGATAGCGTGCTACCATATAAGTTAAGCAAAGAAGATCATTGCTGTCAAATCTGCGGGAAGCGTTACGAAATGTTCCTCAGTCTTCACAAACATATGAACGAACATTACGAGCATTACATCTGCGAGACTTGCGGCAAAAGATTCGCGACTTCGCAACGAATGGTTAACCATTCGAGAACACACGAACGAGGAGTGTTCCCGTGCAAACATTGCGAGGAAACCTTCCAATCGTATTCCTCCCTTTACGCGCACATAGGAAAAGTACACAAATTAAACCAGCGATACAAATGCCCGATTTGCGACGAGAAATTTGGATCGTACAAGCATAGGTTAAAACATCTAAACACGGTTCACGGGGAAAAGACCGCTTCGTTTCCTTGCCCGTCGTGTCCTAAAGTCTTCGATCTTTGCAGTCGCAGAACTGCCCATATTAGATTCCAACACTTGCAAGAGAGGAATCATATTTGTTCTGTCTGCGGCATGAAATTCTTTACTAACTACGAATTGCAAGAGCATTCTATCAAACATGGAGggAATGCCTCACCCACGACCGGCGTCAAAAGCCGTCGTATAGTGCCGCTCTTCCAAGTAGCGTACGACAGGAGTCTTTGCAAGCCACTCGGGACTATCAGCGACTTTAGTAAACTGAAAaagaatgtacctacatacgaaGATGTGGCCTACGATGACGTCCCATCGCCTGGCTCGCTCCCTCGCTCGCCGACTCCTCAAGTACCCGACCCGCAAAAAAATCAAACCAAACCAGAGAAAAAACCAAAAACTACCAACGCTAGACAAAACGCTCTCACAATATTCGAATACTCAACCGCTTATCCATTTGTTTTCTCAAACAATAAATTCAAATGCTTCGTCTGCTCTCAACCGTATTTAGATTTAAAAGTTCTAAAACAACATATGACCGAACACACGTTCACATATGTGAAACGACTGATGAATAATCGAAAAGAAAACGTTTTGAAAGTCGACGTCAGTGATCTGACTTGTAACATATGCTCTTTACCTATAAGAGACTTAGTCACGATGAAGTCACATCTAAAAGAAGCGCATTCAAAGCCAATGGACACAGAATTGCAAGATAATTTGATTCCGTTCAATTTAAATCTGTTCACACCAAACGAAGGCTATCAATGCGTTATTTGTcaacaatattttatcaaactaCGAGCGGTCCAAGCCGAGCCCACAGAGCTCGGGCCCAGAACAAGTATTTGGCACATGACGGCTCCTGAGAGAGAGAACGCGGCCATCTTTTTAGAAAACACTTCCGTTACGCCATTCACATGGCTTCAAGGCAACTACAAATGTTTCTACTGCGACCAAGGATTCACAGAACTAACCCGGGCTTTGAAACACATCAAAAGTCATATCACCCCCAACAAAAGTGATTTGCTAGAAAAATACATCAAAAACGGAAAACGAGTCATCAAAGTCGATGTTTCCGGACTTAAATGTAACATATGTGATTTGAAGTACTCAGAACTAGATGAAGTTCGCAAGCATTTGATGAGTGTTCACAAGAAAGTGTTTCAAAAAGCTGGAAATGGACTCATGGCGTACAATTTGAGTAACGCAAACGACAATACCTATACCTAA
Protein Sequence: MILEFSNACSFSFHRSSFGCMHCTFKSPDFSAIKSHMQIHKDRAEAVRNVDRAGICKVDVTGLRCLLCQYPMENIAKLFEHLIVTHDKPLNRKLNTGLIPYLISDSYVCADCGVAFETFRNLNQHMNKHYQHFKCPICSEGFICESRFKAHIKLVHQKIKKNHKCPMCEESFHSYNQKKSHMVSSHAVLPHKCPYCDEAFKTYRARVIHLNKSHDKDIRYPCSLCDKVYFLASERSYHMQNVHVRDKRYVCSICGETFSFANILYKHMQKHNTEKVYKCDACTKAFARMKSLRTHLKIHNDEKDFVCVRCETGKRRLKIGEYHDARDNAALILEYSNVCPFKWRKNVFGCPYCSFTCPDFDSFKTHMESHPVKSERVEFLRNSRPADIVKANVCNLQCDICHESIKDVSTLVDHLSDHGKPIVKKYGSGVVPYLLDNGFICAYCGESFDRFILLNNHVIQHKLNFACPQCGQYMSSPEGLRKHILRRHVRTPRTKFRPKLSDYNDARHNASIILECSNVCPFKWHRNVFRCGYCDFKSADFAPIRIHINNVHPKRLEALHYSRPTEIFKADVTNLKCVLCDLNVADMKELIDHLSDVHKKTIIKHYGAGIVPFLLCNGLQCADCGKSFDRFMKLNIHVNKHYPNCICSQCGQAFSSENRLRAHSEQHKKKVLHFKCGTCGEVFNSRSIKQKHMETKHDILPHKCPYCNDAFKSYAHRLLHLNKYHGRKIAVIEIKEEAVSDAENDLVPAEATDGAQRRATFRNNITTILQTTTAYPFKYRKGTYLCFYCKNTFLEPEKLREHNTVQHSEANQFLKPRKYEPLKMDFANIICKLCNISIENYVTLKAHLTVEHGKIIDCTWGDSVLPYKLSKEDHCCQICGKRYEMFLSLHKHMNEHYEHYICETCGKRFATSQRMVNHSRTHERGVFPCKHCEETFQSYSSLYAHIGKVHKLNQRYKCPICDEKFGSYKHRLKHLNTVHGEKTASFPCPSCPKVFDLCSRRTAHIRFQHLQERNHICSVCGMKFFTNYELQEHSIKHGGNASPTTGVKSRRIVPLFQVAYDRSLCKPLGTISDFSKLKKNVPTYEDVAYDDVPSPGSLPRSPTPQVPDPQKNQTKPEKKPKTTNARQNALTIFEYSTAYPFVFSNNKFKCFVCSQPYLDLKVLKQHMTEHTFTYVKRLMNNRKENVLKVDVSDLTCNICSLPIRDLVTMKSHLKEAHSKPMDTELQDNLIPFNLNLFTPNEGYQCVICQQYFIKLRAVQAEPTELGPRTSIWHMTAPERENAAIFLENTSVTPFTWLQGNYKCFYCDQGFTELTRALKHIKSHITPNKSDLLEKYIKNGKRVIKVDVSGLKCNICDLKYSELDEVRKHLMSVHKKVFQKAGNGLMAYNLSNANDNTYT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -