Mlit002482.1
Basic Information
- Insect
- Macaria liturata
- Gene Symbol
- Mblk-1_1
- Assembly
- GCA_964023185.1
- Location
- OZ026806.1:18039692-18072083[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-14 4.2e-12 46.1 0.0 1 38 276 314 276 319 0.94 2 2 3.9e-18 1.2e-15 57.5 0.0 1 43 480 523 480 525 0.95
Sequence Information
- Coding Sequence
- atgtattttaaaagtgACGAGACATTGAATGGAGACTTCTTGCCAGCTACAGACCAACAACCACCGCCTCTGAAGATCAAGACCATCGAGCAGATCAACGAGGACGACCGCGAAAGAGACTCCATGCCAGCCACCGACCAACCACCGGCTCTGAAGATCAAGACTATCGAGCAGATCAACGAAGACGAGCGCAAGGCGGAAGATGGCAATCCCAAAGCGCAGCGTCAGGAGACGATCCTGGAGAGCCTGATCAAGCGACCAGCCACGCAGCCGAAGGTGGAGGCGGCCGACGAGCCCGCCGACTGGAAGCCGCCAGACAAGTGCTACTTCTGTACGGATGGTGAAAGACCAGAGGAACAGGATAGGGAGCGGGAGCGGGAACGAACCACGGCGCAGGGAGCTACGAGTCCAGCATCAGAATCGGACAGCAGTTCTGTGTCGGGCGCGAAGAGTCCAGCTGCAGCAGCACCGCCCCTCCTGCAACACCTCCTGCAGCTGCAGGCGCAGAGTCCGCAGACCATAGCACAGTTCCAGCAGATGATAGCAGCACTGGCGGCGCTGGGCCAGGGTCTGCCCACCTTCACGCCGCAATTCCCTCCCTGGATGCTGCCCAGGATGGTCCACAACAGGACTCCCAGTGAAAGTCGCGGCGAAGACAAGCCGGCCCCCGAGTCCCCGGCGCCGGGGGAGCAGCCTCTTGACCTCAGCGCCAAGTCCACCTCCAGCGCCAGCGGGACTCCCCCGCCTGATGGGAAGAGCCTGGATAACCGATTGAAGCGAGCCATCTTGGAGGGTGCCGGGAACAGTGCGACCAAACGGAACTATACTGAAGACGAGCTGCAATGTGCCCTGCGAGACATACAGTCAGGCAAGCTGGGCACGCGGCGCGCTGCTGTGGTGTACGGCATCCCGCGCTCCACGCTGCGGAACAAAGTGAACAAGTTCGGTCTGGCCACGGACGCGCACGAGACCGACCCTGACAGTGATCCTGACACGGACTCCCCTCCCTCCGTCATACTCAAGATACCGACGTTTCCACCGCCCGACGACAAGAGCTCCTCCCCCGCCACGTCAGTCACGACCCCCATCACTCCTCTCACGCCGATGCTCCCCAACCCTCAAGCTCAGCTCAACTCCCAGCTCCTCCTACCCCACTCCGTGTTCGCCGATCCGCTGTCCTCGCAGCATCTGTTGTCGCTCAAGGACGTCATAGCCCAAAACATCAGCCAAAAGTTCCAGCAGCCCCCGGACAGACTGCACGCAGACCTGTCCTTCATGCGAGCGCCGGAGCGACACGTGTCCGTCATCAAGACTCCGCCGGACCAGAGGCACCAGTACCAGGGGCCCAGCAACTCGAGGTCTCAGCCCAATAACAACGGCCAGCCTGCCCCCGGCGGGAAGGGCACGCGGCCCAAGCGAGGGAAGTATCGGAACTACGACCGGGATAGCCTCGTGGAAGCGGTCAAAGCGGTACAACGAGGGGAAATGTCTGTGCATCGCGCTGGCTCATATTACGGCGTACCTCACTCCACGCTCGAGTATAAAGTGAAAGAGCGGCATCTCATGCGGCCGCGGAAACGCGAGCCCAAACCGCAGCCTGACCAGAAACCGCAGCCTCCAAAGCCTCCTCAACCAAAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGACCGCGCCTAG
- Protein Sequence
- MYFKSDETLNGDFLPATDQQPPPLKIKTIEQINEDDRERDSMPATDQPPALKIKTIEQINEDERKAEDGNPKAQRQETILESLIKRPATQPKVEAADEPADWKPPDKCYFCTDGERPEEQDRERERERTTAQGATSPASESDSSSVSGAKSPAAAAPPLLQHLLQLQAQSPQTIAQFQQMIAALAALGQGLPTFTPQFPPWMLPRMVHNRTPSESRGEDKPAPESPAPGEQPLDLSAKSTSSASGTPPPDGKSLDNRLKRAILEGAGNSATKRNYTEDELQCALRDIQSGKLGTRRAAVVYGIPRSTLRNKVNKFGLATDAHETDPDSDPDTDSPPSVILKIPTFPPPDDKSSSPATSVTTPITPLTPMLPNPQAQLNSQLLLPHSVFADPLSSQHLLSLKDVIAQNISQKFQQPPDRLHADLSFMRAPERHVSVIKTPPDQRHQYQGPSNSRSQPNNNGQPAPGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDQKPQPPKPPQPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -