Basic Information

Gene Symbol
Arid4b
Assembly
GCA_964023185.1
Location
OZ026809.1:6298996-6317583[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4e-30 1.4e-26 93.3 0.1 1 89 282 368 282 368 0.96

Sequence Information

Coding Sequence
ATGcAGGTGGATGACCCTCCTTACCTGCCCGTTGGCACTGATGTCAGTGCCAAGTATAAAGGAGCATTCTGTGAAGCAAAGGTCAAGAAAGTTGTCAGAAATATCAAGTGTAAGGTGACCCTGAAAGCTGGTGGCAACATCACAGTGAATGATGACGTCATCAAAGGCACGCTGCGTGTCGGCAGCACTGTAGAGCTGAAGCAGGACCCCAAGAAGGATGCCATGGAAGCTGTCATCACCAAGATCCAGGACTGCAGCCAGTATACTGTTGTGTTTGACGACGGCGATATAACGACGCTCCGTAGATCCGCCCTCTGCCTCAAAAGCGGGCGACATTTCAACGAGAGTGAAACGTTAGACCAACTACCGCTAACACATCCAGAACATTTCTCTACGCCCGTCATAGCAGGCAGGAGGGGGAGGAGGGGTAGGGCGcaATCAGACGACAGTGACGGCGAGGGCCCCGCCCGGCCCGCGAAGGCAGACAGCGCGGAGCGCGAGCCCCACGTGGGGCGCGTGGTGCTGGTGGAGGCGGCCAGCGGGGCAGAGAGGAGGCGCCCGCACCAGCCTGCCTTCCCGGCGCTCGTGGTGGCGCCCACTGCGCAGATCAAGGTGAAGGAGGACTACTTAGTGAGGAGCTTCAAGGATGGCAGATACTACACAGTCCCCAAGAAGGAGGCGCGCGAGTTCCGCAAGGGCGGCGCGCCGCTGGAGTGGTGCGGCGTGGATGCGGCGCTGCAGTACCTCAACAACGGCGTGCTGCCGCCGCACTGGGACCGCGCCGCGCTCTTCAACGAGCCCAGGAACACTTCCGATGATAGCTCGGACGACGAGCCGCGCGAGGAGAAGGACCACTTCGTGGCGCAGCTGTACAAGTTCATGGACGACCGCGGCACGCCGCTCAACAGGAACCCCACCATCGCCAACAGAGACATCGACCTCTACAGGCTCTTCCGgGTGGTTCAAAAACTCGGTGGCTACAACAGGGTGACAAACCAGAACCAGTGGAAGACTATCGCTGACAAAATGGGCTTCCATCCAGTCACCACCAGCATCACGAATCTATGCAAACAAGCGTACAAAAAATTCCTGCACAGTTTCGAGGACTTCTACCGCAAGCTGGGCGTGACGCTGGTGGCGCACCCCCGCGGCGCGCGCACGCCGCCCGCCGGCCGCTCGCTCATCCGGGACCGAGACAAGCAGCCCCCGCCCGCCACCACCTCCTCCTCCGCCTGCTCCACGCCCACCGGCCCGCCCGCGCTCAGAGGCAAAGACAAAGATTCCGACAAGAGTGAGACGGATAAGAGTGAAAAGGATGACAAATCAGAGAAGGGAGATAAGAAAGAGAAAATTGAAAGTGATGAAGAGGACAGCGCTGATAATCAACCACTCATCACTACTGCGGCGCccaagttaatagaaaaagaaaaggagaaggACAAAGAGAAAGAGAAGGACAAAGACAAGGAGAAAGAAAAGGAGAAAGAGAAAGAGCGCGAAAAGGACAAAGAGCGAGAGAAGAGTACTTCCACCACCACTAGTGAGGAGACACCGAAGCCTGTTGTAATCAAACCGCGCTCGCAGTCAAAGGGACGCGCCGTCACGCCGCTCAAGACGGAGCGCACGCCCAAACGGAGGCCCTTGTCTTCTAAGAGTGAAAGTGCCACAATAACCACATCGCGAGCTTCGAGAAGGCCACAAGTTTCCACAGACAGTGACAGCTCAGGCAGAGCTTCCagatGCGGTCTCACCAAAAAGCTGCAGAGTCGGCGCAGTCAGAGCGCCAACTCAGCAAGCAGCGGGAATACCATAGCTTCCAACAGTAGCAAACGACCGCGCAAGAGAAAAACCACTGAACCATCCACAAGCGAGCCCACAAGAGGCGTGTCCAACGTAAAGGCTCAAGTGGGCGACAAGCTCAAGGTGTACTACGGCCCCACGCAGTCAGAATCCAAGGTGACATACGAGGCGAAGGTGATAGAGATCTCGTCTGAGGGCATGCTGCGAGTTCACTACACTGGATGGAACACTCGCTACGATGAGTGGATCAAACCACAGCGCATTGCCGTCAATGTGTCGCAACATGAGAATAGGAACAAGAAGggtTCAAGTCTAAACAGGCGAGTCAGAGTTAAAAGGGTTGAAGAATCATCCGCACGATCAGATTCTGACACATCAGATAGCGACGACGAGGTTAAGCGACCTCCGAAAAAATCTGACGACAAATCGACACCTAAAACTCGTGAGCCCAGATCGAAAGACGCTAAATCGAGCGACAGCAGCAGTTCCAGTAAGCCACGCAAGAGACCCGTGCGTAATGTCGCTACTCCTACTAATGTATCCCCTCCGAAGAAACCTCGCCTAAGCTCAAGCAGCCACCAAGGACGTGACTATGATCTCAATGAAATCAGATCTGAGCTCAAAGGATTCAATACAGTCAAACAAGAGCCAGAAGAAATCAAGCAAGAGCCTGTGGATAAAGATACAACCATGGCTGACATCCCTCTACCTGCTGCTCCGGCTCCAGATCCAGCTCAAACGGAGAAGCAAGCTGAAGATGTCTACGAGTTCAAAGAACCTGAGCCGTTTGAACTGGAACTACATGATGAAAAGAAAAAACGAACTCATCGCATATTTGATGATATATCGCCGAACAAATACACGTCAACGCTGTCGAAATCTTTGAGCGAGGAAATCAGTGAAGATCCGATGAGGCCGCGAGCTGCGTCCCTAAGGTCACCGTCTCTATCTCCATTCAGAGATTTCAGTGGAACGCGTGAACCTGGCCGGCAGAGTCCAGAGGAGGACTCGAAAGATGGCATCTTATCTTTGGACGACGACTCGTTCCAAGGTGATGGCAGCTCCGGACCACAGTTCGAAGGATTTACGCCGGCAAAGAATCAAGAAACATATTCGAAAAAGAGCAAAGTCTCCAAGCTACGAAAACTTATCTGCGATTCGCCGGATAGCCCGGCTGATGATGAACAGTCGTCGGAAGACGAACCTGAAGATGTAGCGATGAAAGAAGAAGACGAAGAGGAGAGAGAACCGACTCCAGTATTACCCAGCGCTGAAGAATCAAAATCTTCGACTTCTGATgacaaagaagaagaaaaagaaccaGAAACAACGAAAGAAGATACTGAAGATACCGTTATGCAAGAAATACCTCCAGAAATACTCAACATACCTAAACCGCCTACGACACCACCGTCACCGCAGCATGATCCTGAAttcttgaataaaattgaacttCCTAAAGCTATAGAAATCCCTAAAGAAGAAACACTTAAAAAAGTTGAGCCTCCTAAAAAGGTAGAATCACCCATAAAAATTGAACTGCCGAAAAAAATAGAATTGCCCAAGAAAGTAGATCCACCTAAAAAAGTGGAATTACCCAAATTGGAAATGCCCAAAACCAGTATTATTCCACCTGCAACGCCTAGCACTAGTACGGCTGCAGTTGAAGTCAAGGAAAAGGTGAAACAGGAATCTCCAGAAGACGAACAAATCAAACTGTTGTCGATACCCCTTCCATCTTCAGAGCCAAAAGAAAGTATTATGAAAATCATGACAACGCCAAAGAAGGTCGAAAAGTTGGACCCTGAGCCTGTGAAGTCTATGGAACCTCCTTCGAGCCCACTTATTGACACGGAGGAAGATAAGTCTGAGCCCGACAGCCCGGCTCGCATCGACGTGCTCCCGGAGCCTCCAGCGGGCTTCAAACTGCAGTCTGAGGGACCTAAGATAGCTGAAAAACTTCTCAAAGCTATCAGCAGCGCCAAAAGGCTATCCATGTCTCCACCGCCCGTGGTGGTCGAGAGACCAGAGACTCCTAAAAGCCATCTCACAGCGGACACACTTAAAACGAAACCTGACACCAAACTATCACCTATATCTCCCGAGCCCAGGACAAGCTTACTGAAACCAGAGCCAGTAAAGCCTGTGGCTAAAGCAAATGTTCCTGCGAAGAAAGAAGACACCATATTTGGTGAGCCAGTCAACCTTCTTGACGTCAAACGAGACGTCCTAGATATCAAGAAGAAATCTGAAGAGCGCACTTCCCCTAGAATGCAGAGTCCGCGGTTACAAAGTCCGTTGAACATTCTAGAACGGCGGAAGAGCGTAGCGGACTTGCCCCTGAATGTAAACCCGGGTAAAAACAACAAGGTGCTGAGTGATACCATACAGAAGCTGTCGAGTCAGATCAACCAGGCGGCCGCCTCGGTCGCGGCGATACCGCTGCCCTCCTTCCCGCCGGAGGATCGGAGCGAAAGCAGCGACTCTGATGATTCAGATAGAAGGCTAATAATCGACAAGATATCAATAGAAGAGTGGGGCAGCGGCGGCTCGTCGGAAGCCTCACGAGCCGCCGCCAGCGGAGCTGCGGCCGGGCTCAGGGCGTTACATGCGGAGAAATCTGCGGGAGAATGGAGCGCGGGAGAGTCACTACTCATGTTGGAGGACGCATGCAAGAATGAGAGGAAACATAGTGCGAGCGTGGTGGTAGCAGGCAGCGGCCGCCCGCCCGCAGCCCCGGCAGGTGCCGCGAGCGCTGCgtgcgcgccgccgcccgccgagGAGGACAGCAACCTGTCCTTGCTCCTCTGCGAGGAGACCATCCCCGGCTCCCCAGCGCCGGACGCGGAGCCCGCGCCGCCGCGACACAGGCACCACATGCCCTTCGCATCGGCGCTGCCACACCATCACAATAGGCCTAAAGACGATCGTCGCGGCGAGGGCAGCTCCCGAGCGGGCGCGGCCAACCCGCCCGCCGACCCGGAGAGGGAAGCAGCGGAGCCCGCCGGGGAGGGCGCCGGCTGGGGGCGCGGCAGGGCTCTGTACGACAACACGCCGCCCACCACGCCCGACTCTAGCCTAGACGCCTCGCCACAGAGagAGCGGCGTATTTCAGAGCGAGATAGTCCTTCAGACCGCAAGGATGACGACGAGGAGAGCAGGCCCAATGATGCGGCCATGGATATTGACAAGTCCAATCATGACCCGAACTGGGACTGCCAGACGCGAATAAACCTGCTAACGTCTCGTCTGGCGGACCTGCGCAAGGCGTACCACACCGTCAAAGCAGACCTGGCCGCCATCGACCGGCGGAGGAAGAAACTGCGCCGGAAAGAGAGAGAAGCTGTGAAGGCGGCGAAGGCGGCGTGTTCATGA
Protein Sequence
MQVDDPPYLPVGTDVSAKYKGAFCEAKVKKVVRNIKCKVTLKAGGNITVNDDVIKGTLRVGSTVELKQDPKKDAMEAVITKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFNESETLDQLPLTHPEHFSTPVIAGRRGRRGRAQSDDSDGEGPARPAKADSAEREPHVGRVVLVEAASGAERRRPHQPAFPALVVAPTAQIKVKEDYLVRSFKDGRYYTVPKKEAREFRKGGAPLEWCGVDAALQYLNNGVLPPHWDRAALFNEPRNTSDDSSDDEPREEKDHFVAQLYKFMDDRGTPLNRNPTIANRDIDLYRLFRVVQKLGGYNRVTNQNQWKTIADKMGFHPVTTSITNLCKQAYKKFLHSFEDFYRKLGVTLVAHPRGARTPPAGRSLIRDRDKQPPPATTSSSACSTPTGPPALRGKDKDSDKSETDKSEKDDKSEKGDKKEKIESDEEDSADNQPLITTAAPKLIEKEKEKDKEKEKDKDKEKEKEKEKEREKDKEREKSTSTTTSEETPKPVVIKPRSQSKGRAVTPLKTERTPKRRPLSSKSESATITTSRASRRPQVSTDSDSSGRASRCGLTKKLQSRRSQSANSASSGNTIASNSSKRPRKRKTTEPSTSEPTRGVSNVKAQVGDKLKVYYGPTQSESKVTYEAKVIEISSEGMLRVHYTGWNTRYDEWIKPQRIAVNVSQHENRNKKGSSLNRRVRVKRVEESSARSDSDTSDSDDEVKRPPKKSDDKSTPKTREPRSKDAKSSDSSSSSKPRKRPVRNVATPTNVSPPKKPRLSSSSHQGRDYDLNEIRSELKGFNTVKQEPEEIKQEPVDKDTTMADIPLPAAPAPDPAQTEKQAEDVYEFKEPEPFELELHDEKKKRTHRIFDDISPNKYTSTLSKSLSEEISEDPMRPRAASLRSPSLSPFRDFSGTREPGRQSPEEDSKDGILSLDDDSFQGDGSSGPQFEGFTPAKNQETYSKKSKVSKLRKLICDSPDSPADDEQSSEDEPEDVAMKEEDEEEREPTPVLPSAEESKSSTSDDKEEEKEPETTKEDTEDTVMQEIPPEILNIPKPPTTPPSPQHDPEFLNKIELPKAIEIPKEETLKKVEPPKKVESPIKIELPKKIELPKKVDPPKKVELPKLEMPKTSIIPPATPSTSTAAVEVKEKVKQESPEDEQIKLLSIPLPSSEPKESIMKIMTTPKKVEKLDPEPVKSMEPPSSPLIDTEEDKSEPDSPARIDVLPEPPAGFKLQSEGPKIAEKLLKAISSAKRLSMSPPPVVVERPETPKSHLTADTLKTKPDTKLSPISPEPRTSLLKPEPVKPVAKANVPAKKEDTIFGEPVNLLDVKRDVLDIKKKSEERTSPRMQSPRLQSPLNILERRKSVADLPLNVNPGKNNKVLSDTIQKLSSQINQAAASVAAIPLPSFPPEDRSESSDSDDSDRRLIIDKISIEEWGSGGSSEASRAAASGAAAGLRALHAEKSAGEWSAGESLLMLEDACKNERKHSASVVVAGSGRPPAAPAGAASAACAPPPAEEDSNLSLLLCEETIPGSPAPDAEPAPPRHRHHMPFASALPHHHNRPKDDRRGEGSSRAGAANPPADPEREAAEPAGEGAGWGRGRALYDNTPPTTPDSSLDASPQRERRISERDSPSDRKDDDEESRPNDAAMDIDKSNHDPNWDCQTRINLLTSRLADLRKAYHTVKADLAAIDRRRKKLRRKEREAVKAAKAACS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
-