Mlit011472.1
Basic Information
- Insect
- Macaria liturata
- Gene Symbol
- tfap2e
- Assembly
- GCA_964023185.1
- Location
- OZ026814.1:9511171-9519690[-]
Transcription Factor Domain
- TF Family
- AP-2
- Domain
- TF_AP-2 domain
- PFAM
- PF03299
- TF Group
- Basic Domians group
- Description
- Activator protein-2 (AP-2) transcription factors constitute a family of closely related and evolutionarily conserved proteins that bind to the DNA consensus sequence GCCNNNGGC and stimulate target gene transcription [PMID: 2010091, PMID: 1998122]. Four different isoforms of AP-2 have been identified in mammals, termed AP-2 alpha, beta, gamma and delta. Each family member shares a common structure, possessing a proline/glutamine-rich domain in the N-terminal region, which is responsible for transcriptional activation [PMID: 2010091], and a helix-span-helix domain in the C-terminal region, which mediates dimerisation and site-specific DNA binding [PMID: 199812]. http://www.ebi.ac.uk/interpro/entry/IPR013854
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.2e-82 2.2e-77 260.0 0.0 1 196 35 227 35 228 0.97
Sequence Information
- Coding Sequence
- ATGGATGACACCACGGGTTTCATGACAGATCTACCTCTACtaaaaaCAATGAAAGGCCGCGACGGTCTCGGCGGTACCGGCTCGTGCGCGCCTAACGACGTCTTCTGCTCAGTACCAGGGAGACTATCTCTTCTGTCTTCTACCAGCAAGTACAAGGTGACGGTGGCGGAGGTGCAGAGGCGGCTGTCACCTCCAGAGTGCTTGAATGCGTCGCTGCTTGGAGGCGTGTTAAGGAGAGCAAAAAGcaaaaatggcggccgattgTTACGGGAGAAGCTTGAGAAGATCGGACTCAACTTACCCGCGGGAAGACGAAAAGCGGCCAATGTTACACTGCTTACATCTCTAGTAGAAGCGGAAGCAGTACACCTAGCACGTGATTTCGGCTACGTGTGCGAGACAGAGTTCCCCGCACGGGCCCTGGCGGAGTACCTCGCCAGGCAGTACGCGGAGCACGACGCCAGGCGCCGCCGGGACCTGCTGCAGGCTACTAAACAGGTGACGAAGGAGCTAATGGACCTGCTGAACCAGGACCGCTCCCCGCTGTGCAACACGCGGCCCCCGCACCTGCTGGAGCCCGCCATACAGAGACACCTCACGCACTTCTCACTCATCTCACATGGCTTCGGGGGCCCTGCCATAGTGGCTGCACTTACAGCTATACAGAATTTCCTGAACGAATCACTGAAGCATTTAGACAAGCTGTATCCCCAAAGTGGCATGGTGTCATCATCGATGGACAAAACAAAAATGGACCCCGACATCAAGAAGTAA
- Protein Sequence
- MDDTTGFMTDLPLLKTMKGRDGLGGTGSCAPNDVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRLLREKLEKIGLNLPAGRRKAANVTLLTSLVEAEAVHLARDFGYVCETEFPARALAEYLARQYAEHDARRRRDLLQATKQVTKELMDLLNQDRSPLCNTRPPHLLEPAIQRHLTHFSLISHGFGGPAIVAALTAIQNFLNESLKHLDKLYPQSGMVSSSMDKTKMDPDIKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00633997; iTF_00206674; iTF_00462052; iTF_00317797; iTF_00418659; iTF_00420228; iTF_01337464; iTF_00843995; iTF_01403136; iTF_00723656; iTF_00376778; iTF_00236333; iTF_00431823; iTF_00180113; iTF_01361268; iTF_00704629; iTF_00953208; iTF_00947579; iTF_01152731; iTF_00406398; iTF_01142815;
- 90% Identity
- iTF_00633997; iTF_00206674; iTF_00462052; iTF_00317797; iTF_00409960; iTF_00008586; iTF_00376778; iTF_00953208; iTF_00947579; iTF_01152731; iTF_00406398; iTF_01072126;
- 80% Identity
- iTF_00633997;