Lcor013831.1
Basic Information
- Insect
- Lysandra coridon
- Gene Symbol
- gatad1
- Assembly
- GCA_905220515.1
- Location
- HG992069.1:4124452-4125649[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-08 4.9e-05 23.5 2.0 1 33 6 36 6 39 0.91
Sequence Information
- Coding Sequence
- ATGCCTAAGCCGGTTTGTGTGCAGTGTAGCTCGAACGATTCACTTTTGTGGCGAAGTTCGGGAAGTGGTCAAATATGCAACGAATGTCACATCACAAACACGGCGAAAAAGGAGCTAAAAGTCGAAGTTACTGTAAAGAACGAGAATGAAGAAAAGAAAGAGGAGAAAGAAGATACTGAAGCCAAGAAAGACAAACCAGAAGGCGAAACAACGCCAGCCAAAGCGACTGGCAGAGGGGTGCGGAAAAGTACGCGTGCGACCAGATACAAAGCTAAAACTCCCGCACCGACGCCTAATAAGACTTCGGGGCCTCGCGGCAGAGGCAGGAGAAGCATATTTAAGAGGCAGCCCCTAAAGGCGCCAACAGCAACAGCTACAGTGGTCACAAGTGACTCTATATTTTACAAAGGCATGTACATGCAGAAAGGTGATATAGTGTCCATGATTGACATTGACGGTGGCATATATTACGCTCAAATTAGAGGGTTTCTGACAGATCAGTATTGTGAGAAAAGTGCAGTAGTGACATGGCTATTACCTACTAAAGCCAGCCCACCTCCGGAAAAAGGATTTGATCCTGCCACATACATCATTGGCCCAGAAGAAGAGTTACCTAGAAAATTGGAATACATGGAGTTTGTTTTGCATGCTCCCTCAGATTATTATAAGGCTAGTAACAGTCCCTATCCCTTGACCGAAAGTGAGCTCAATAACTACAGTGGATTCATATGGACGTCATTGGAGCCTAAGGAAAGAACATAG
- Protein Sequence
- MPKPVCVQCSSNDSLLWRSSGSGQICNECHITNTAKKELKVEVTVKNENEEKKEEKEDTEAKKDKPEGETTPAKATGRGVRKSTRATRYKAKTPAPTPNKTSGPRGRGRRSIFKRQPLKAPTATATVVTSDSIFYKGMYMQKGDIVSMIDIDGGIYYAQIRGFLTDQYCEKSAVVTWLLPTKASPPPEKGFDPATYIIGPEEELPRKLEYMEFVLHAPSDYYKASNSPYPLTESELNNYSGFIWTSLEPKERT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00205730;
- 90% Identity
- iTF_00406385;
- 80% Identity
- iTF_00934407;