Lcor000722.1
Basic Information
- Insect
- Lysandra coridon
- Gene Symbol
- GATA-B
- Assembly
- GCA_905220515.1
- Location
- HG992088.1:254357-264330[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.9e-18 1.7e-14 53.7 4.2 1 34 220 252 220 254 0.97 2 2 2.3e-18 8.2e-15 54.7 5.4 1 34 403 435 403 437 0.97
Sequence Information
- Coding Sequence
- ATGGATGATTTAAACGGTATACCCATCCTTATGAAAACGCATTATATTGCTATTGAAGGCAGTTGCCTCGGCGACGGCAAGCGGGTCGAGGGCGCGAGCGGGCGGCGGCGGAGTGCGAGGGGCGGGGGGTGCAGCGATAACGCAGCACTTCCGAGACGTTACGAACCATTAGACGCGCCGTTCCACTTGCCACCGCAATGCATTGAGGTCACAGCTACCAGTAAGACATGCCATGAAATTGACGACTTGCATTCGGCTAGCGAAGATGCCAGCGGCGCGATATACTCCCGGGCGTACTCCGGCGCCGGCTCGCCCTATTTCCCCGCCCCGGACCTACAGCAGACACAGATATGGACATCCAGCGGAGGCACATCACCGAGCTACGCCACAGTGGAGGAGTACGCGGAGGGCGAGGCGGGAGGTGCGGGGGTTGAAGGGGGCGCGGGAGGTGCGCTGCCCCCCTTCGGCCGCTTCACCGGCGCCTTCGCCTCGACTAGCCGCCCCGGCACGGTGTACGGTTCCCCCACCATCACCACTAATGCTTATGAGCAACAGGGAATGTGGAGCGGAGTGGGCGCGGTGCTGGACAACCGCCGGACGCAGTACTCCGCCGCCGCCAGCCTCTCAGCTTTCGAGGACTTTGTGGAGGTGCGCGAGTGCGTCAACTGCGGCGCCATCACGACCCCGCTGTGGCGGCGCGACGGCACCGGCCACTACCTGTGCAACGCCTGCGGCCTCTACAACAAGATGAACGGCATGAACCGGCCGCTCAAGCAGCAGCGGCGGCTGGTACGTCAGCGGCACGCGCTCCCCCCGGCCGCGCCCGACGTACGCACTCAGCTCGCCCCTCACCCCCCGCCCCCCTCGCGCGCTCTACCCCCCGCCCCCGCCCAGCGATCCGCGCCCGCTAGCGTCCGCCTCGGGCCGTCCTATACCCGTCTCGTGACGAGCGTCCTGTTGTTGCAGTGGCCGAGGGGGCGCCGCCGGGCGCGGATATCTACAAGGGCTTCCTGTATGGCGGCGTCGGCTCCGCGCTCCCCGCCACGCCCGCGCTCGCCGCCAACACCCCTCCCGACTACAACAAACAGAAGAAAGGGGTACGTCAACCCCGCAACCCGCGCCCCACACCCCGCGTCCCGCTCACTACCTCGTGCTCCCCGCTCCTCGACCCGCCATGCGGGCGGGCCGAAGCGGCCGGGCGTGATGTGCAGCAACTGCCAGACCTCGACGACGTCGCTGTGGCGCCGCAACGCGCACGGCGAGACCGTCTGCAACGCCTGCGGCCTGTACTACAAGCTGCACAGCATCAACAGACCGCTCGCCATGAAGAAGGACTCTATACAGACGAGGAAACGGAAACCAAAGAACGGCATGAAGTCCGACCGAGGCGTCAGCAAGACCAGCCACGCCATCGCCAAGAGCCCGCTGCCGCACATGGGCCGAAACGTCAAACTCGAGAACCTACGTGAGTGTAATATGACTATTATGGCACGTGTGGAGGCGTCGGGCGTGCGGTCGCCGATCGGCTACTACGTGCAGTCGCACGTGGGAGCGCCGCAGCCCCACACCGTCAAACTGGAGAAGGGCTCGCCGGCGCCGGCGCACTCGCAGAGCCTCGCGCAGGCGCACGCGCACGCGCACACGCAGGACATGTCGCACGCGCACGCGCAGGCGCTCGCCTTCTACGGCGACGGCGAGTACCGGCGCGCGGCGGAGCAGGCGGCGCGCCTCGACCGCCCCACCGTCGTGTCGCTGGGCAGCTGA
- Protein Sequence
- MDDLNGIPILMKTHYIAIEGSCLGDGKRVEGASGRRRSARGGGCSDNAALPRRYEPLDAPFHLPPQCIEVTATSKTCHEIDDLHSASEDASGAIYSRAYSGAGSPYFPAPDLQQTQIWTSSGGTSPSYATVEEYAEGEAGGAGVEGGAGGALPPFGRFTGAFASTSRPGTVYGSPTITTNAYEQQGMWSGVGAVLDNRRTQYSAAASLSAFEDFVEVRECVNCGAITTPLWRRDGTGHYLCNACGLYNKMNGMNRPLKQQRRLVRQRHALPPAAPDVRTQLAPHPPPPSRALPPAPAQRSAPASVRLGPSYTRLVTSVLLLQWPRGRRRARISTRASCMAASAPRSPPRPRSPPTPLPTTTNRRKGYVNPATRAPHPASRSLPRAPRSSTRHAGGPKRPGVMCSNCQTSTTSLWRRNAHGETVCNACGLYYKLHSINRPLAMKKDSIQTRKRKPKNGMKSDRGVSKTSHAIAKSPLPHMGRNVKLENLRECNMTIMARVEASGVRSPIGYYVQSHVGAPQPHTVKLEKGSPAPAHSQSLAQAHAHAHTQDMSHAHAQALAFYGDGEYRRAAEQAARLDRPTVVSLGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00934402; iTF_01218005;
- 90% Identity
- iTF_00934402;
- 80% Identity
- -