Basic Information

Gene Symbol
kn
Assembly
GCA_905220515.1
Location
HG992111.1:1539345-1581526[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.6e-31 3.7e-27 95.5 0.0 11 97 136 212 127 232 0.86
2 2 2.9e-45 4.1e-41 141.6 0.7 112 182 1065 1135 1060 1152 0.94

Sequence Information

Coding Sequence
ATGCACGAAAGCAGCGCCACCTACTACAGAAGCGTCGTCTCGCTCTTGTGGCGAGGGCGTGTCCCCAGGGCGCCTCCCAGCGGGGACGGGGGCGCCGCAGCGAGCACTCGACGCGATCCCGCGACGCTTTACGAAATAAAGTGCGGGAATTCGGAGCCCTCGGTCGGCCGTTTTCGCGTGTGTTCGCGCGTGGTCGGGGAGCCGGTCGCGATTCGGTCGGACGAGTTGAACGCGGCGGCGGGCGGGTACACGGGCTCCCCGTGGCCGCCGCTGGACCTGGACCCGGTGGGATGGGGCCGCAAGCTGTACCCGACTGGGGCCACCCGATCCTCAGGAGGTCTAATGTTCGGGCTTCATCATCAAGAGGCGGCGGGCGTGCACGCGCAGCCCCGTGGCCCCGTGACGTCACTGAAGGAGGAACCCCTCACTCGAGCCTGGATGACCCCCAGTTCCCTAGTTGACAATACCAACACGGTGGGCGTAGGACGCGCACACTTCGAGAAGCAGCCGCCCAGCAACCTGCGGAAGAGCAATTTCTTCCATTTCGTAGTGGCGCTGTACGACCGAGCCGGCCAGCCGGTGGAGATCGAGAGGACCGCCTTCATCGGGTTCATTGAGAAGGATCAGGAAATAATATCAGGAGTAAAGATGGAAGATCTACTATCAATTCAGCAGCAGTTGGTTGGAGCGATTGAGCAGATCTACTCCAATTACAAGAAAGATGGGCCGGAGCGCAAGACCGGTGACTACATCAGGAGGAGACTGGAAACCCTGGATCAATACTGGCAGGAGTTTCAAAATAACCACGTCAAGCTATGTGGTTATAGCGACAAGTCTCACGATTATTTCGTGACCGATCAGTTCGAGGCAACCAAAGAGCGCTACGGACACATCCGGTCGGTCATCATGAACCATCAAGCACGGGACGCCAAGCCGAGTACACCGCTGCTGCGGCCGGCGACTCCGTTGGGCGGCGCGTCGACGTCGCAGCCACCCGCGCGCACCTCGTCTCCAGCAGCAAGGCAAGACGGCGCGCACGAGGGAGAAAATCAGGTAACTTTCAGGGCTCAGGGCGTCAACAGCAGGACGGACGAGTTGCTCAAAAAGCAAGCGAGCAACTTCAGAGCTCTACAGAGAAAGGGAACCATAACAGGAATAGGCGAAAAGGAGAGCAACTGCAAGGGTATTATTAAAATCAAGTGTAGGTCTAATCAAGAAGACTTCTCATTCGAAACGGATGCTTATATCATGAATACTTTAATCAAGAATCTGCCCTCCTACAGCTTTCCTAAACCAGATTGGCCCGCATTAGAAAATTTGCCTCTAGCAGATCCTTTCTTCAATGTGAGAAGACCAGTAGACCTTCTCCTTGGAGTGGATGTTTTTAGCAATTTATTGTTGGATGGAATTTACAAGGCTGGACCGACTCTACCTATGGCGCAAAAAACGCGCTTAGAAGGTTCATTTAATGTTACACCGCTACAAAACCAAAGTTTATTCTTCGACAAGGTGACAAACATGGCTCTCATCAAGGACGAGTGGCGCCTAGTCGTCTACTACGATATGAGTCCCTACTGGGAGGGCTCATTAACAGCTAGCAAGTACTTAGATTATTTACAAAACATATGTGATAGTAAACAAGACCATTCACAATGTGCAGCGATTATGTTACAACTACGTCACGGCTACGAACAATTAAGTCACTATAACAATGTTATGATGAACAAGCAAAATTCGCGCACGCGACGAGGACTGATAAATGGAGTCGGTAATATAGCAAATTCTTTATTCGGAATTCTGGATAGTAATTTCGCTGAAAAATATGAACAAGATATTGAGCTTATCAAGAAGAATCAAGATCATCTCGCCGTACTCTGGAAAAATCAGACGTCCGTCGTTGAAGCCGAATTTAATCTGTTGAAGCGTACAGAGGATATCATGAACAAGCAGCACAAGATTATCAATCTACGTTTAAATCAAGTGGAACAACAGTTGAACGCCGCTAAGAAGGAAAACTTAGAAAATAATGATTTTATACTTTCCGCAATAGTCGCCAGCAATTTACTTAGTCATCTAAAAGAAATGCAGAATACCCTGTTAGACACTATGACTAATATATACAACGGACAGCTCAGCTTACACCTATTGACACCAGACCAGCTTCGACAAGAATTAAATACTATATCAGGAAAAATATCTAAGGACTTATGTTTACCATTTGAGAATATAAGCTTACCTAATATTTATCATTTATTAAAAGTTAAAGCTAGAATGTCTACAAATTACTTACTGTTTGAAACTAAAATACCTCTAGTTCACCGAGATAGTTTCGAAATTCATAAAATCATTGCCGTACCACGTTTAGTAAACAATAGCATCATGATTCATATAAAACCCGTATCAAGTTACCTAGCGATTAACCTTAAAAAGGACGCTCTGTTGCCTATGACTGAAAGTGACCTAAAATCGTGTCTGCAGCAGGAATCAGGCACTCTATTATGTAGAAGCAGGTCACCAGTGTACTCCCTAAAGGACGACGAGAGTCTCTGCGAAAAGGATGCAGCCTCCGGGAGATGCAGGGTCTATCAGGAGCCATGCCGATCACAGTGGCATGAGTTGCATCAAGTAAACACATACTTTTACTTCTACTGTCAAGAACAGAACGTGAAGGTACTCTGCGACGATCAAGTTTCATCGCTACAGCTGTTTCAAGCTGGCTTATTGATGACAAATCAAGGTTGTCTTCTGAAGTTCAAGGACTTCACTGTGTATACTCACAAGCAGGAGGTGAGTGATCTGCACATCAAGGCAGATGTTATTGCTCCAAAGTTATCGCCGATCAACTATCTTATCAACATATCGGTACCGAGCAACGGCACTACTAGCGCAGGGGACGAGGATGTCAGCGAGCATTCAAGGCAGCTGATACATCTGCAGAAGCAGATAGAGAAAATGAAGCAGACCGTGCCGCTGTACGATAGTGTCAGCAGCCACGACATTCATCACTATACAGCGACGTATATCATCGTCATTGTGGCTGCTGTTGGAGCAGGTGTCTGGGGAGCGCGTAGGTTCCGGCACCGGCGGTCGGCGCGGGCAGCGGCGGAGCAGGTGGCGCAGCGCGCGGGGCGGGCGGCGCCGTCCACTCCGGAGGTGGCGAGGCGGCAGCCGCCCTCCTCCTCCACGGCGGTGATTGACAATCAGTGTATGAGACAAGAGCAGGATATTTTCGTGCGACTTATCGACTCCGTCACCAAGCAGCCGATCGTGTACGAGGGCCAAGACAAGAATCCCGAGATGTGCCGAGTTCTACTCACACACGAGGTGATGTGCAGCCGTTGCTGCGACAAGAAAAGCTGTGGCAACAGAAATGAAACTCCATCAGACCCTGTCATCATCGATCGGAAAAGATGGCGCGATGAGCTGGAGGCGTACCAGCCGGGCTGGCCAACGGTGGCTCTTGAGCGAGACAAGTGGAAGACCCTGGGGGAGGCCTTTGCCCAGCAGTGGGAAAGTATAGGCTAA
Protein Sequence
MHESSATYYRSVVSLLWRGRVPRAPPSGDGGAAASTRRDPATLYEIKCGNSEPSVGRFRVCSRVVGEPVAIRSDELNAAAGGYTGSPWPPLDLDPVGWGRKLYPTGATRSSGGLMFGLHHQEAAGVHAQPRGPVTSLKEEPLTRAWMTPSSLVDNTNTVGVGRAHFEKQPPSNLRKSNFFHFVVALYDRAGQPVEIERTAFIGFIEKDQEIISGVKMEDLLSIQQQLVGAIEQIYSNYKKDGPERKTGDYIRRRLETLDQYWQEFQNNHVKLCGYSDKSHDYFVTDQFEATKERYGHIRSVIMNHQARDAKPSTPLLRPATPLGGASTSQPPARTSSPAARQDGAHEGENQVTFRAQGVNSRTDELLKKQASNFRALQRKGTITGIGEKESNCKGIIKIKCRSNQEDFSFETDAYIMNTLIKNLPSYSFPKPDWPALENLPLADPFFNVRRPVDLLLGVDVFSNLLLDGIYKAGPTLPMAQKTRLEGSFNVTPLQNQSLFFDKVTNMALIKDEWRLVVYYDMSPYWEGSLTASKYLDYLQNICDSKQDHSQCAAIMLQLRHGYEQLSHYNNVMMNKQNSRTRRGLINGVGNIANSLFGILDSNFAEKYEQDIELIKKNQDHLAVLWKNQTSVVEAEFNLLKRTEDIMNKQHKIINLRLNQVEQQLNAAKKENLENNDFILSAIVASNLLSHLKEMQNTLLDTMTNIYNGQLSLHLLTPDQLRQELNTISGKISKDLCLPFENISLPNIYHLLKVKARMSTNYLLFETKIPLVHRDSFEIHKIIAVPRLVNNSIMIHIKPVSSYLAINLKKDALLPMTESDLKSCLQQESGTLLCRSRSPVYSLKDDESLCEKDAASGRCRVYQEPCRSQWHELHQVNTYFYFYCQEQNVKVLCDDQVSSLQLFQAGLLMTNQGCLLKFKDFTVYTHKQEVSDLHIKADVIAPKLSPINYLINISVPSNGTTSAGDEDVSEHSRQLIHLQKQIEKMKQTVPLYDSVSSHDIHHYTATYIIVIVAAVGAGVWGARRFRHRRSARAAAEQVAQRAGRAAPSTPEVARRQPPSSSTAVIDNQCMRQEQDIFVRLIDSVTKQPIVYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRKRWRDELEAYQPGWPTVALERDKWKTLGEAFAQQWESIG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-