Lcor024252.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Lysandra coridon
Gene Symbol
arid5b
Assembly
GCA_905220515.1
Location
HG992114.1:3838170-3850201[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.7e-12 5.5e-09 36.9 0.0 2 89 287 361 286 361 0.88

Sequence Information

Coding Sequence
ATGGTACAGCTAGCGCCATCTAGCGGCGACCGCGCGACTCAGGAATTAGGGGGCCACGAGACTAAGGAGTTTGGGAACCTACTTCTTAAAAAAGAGGAGGTTCTGTGGTCGTCCGCGTCTGTGGGATTTTTGTTTGTACACGAGGTGTTGGCCATCAACGACAAGGTGGTGTTGCGCGCGGAGGACCTGCTGAGCTGGGTGTGCGTGGGGCGCGAGTGGCGGTGGGGGCTGCGCGCTGTGTGGCGCGGGGACTGCGCTCCGCCCGCGCCGCCCTTCCCCGCCTCCGCACCCCCCGCACCCCACACCGCGCCGCTGCACCACACCAGGCTGGACTTCAGCGATGTGGAGAAGGAGAAGAGCGCCATCACGATAGACGAGGAGGCGCCGGGCGTGGTGGTGTTCTCGTACCCGCGGTACTGCCGGTACCGGGCGCTGGTGGCGCGGCTGGAGGGCATCCAGGCGCGCTGGCTGCGGGACTCGCTCGTCGCCGCGCTCGGCGGGTACGCCGCGCCCACCAAGAACACACGGATACTGTATTGTAAGGACACATTCGAGTACCCCGAGCTGGAGGGGCACGAGTTTGTGTGCAACCACCTGTCGCCCAAGCTGAAGGGGCGGCCGCGGGGGCGCCGGCGCCGCGCCGCAGACCGCTCGCCCGGCCGCTCGCCCGCGCGCTCTGACTCCAGATCCAGCGAATCCGACGGACGACACACGCCAGATAACAAGACGCACAGACGACTCTCCCTCCGGAACGGGCCAGACAAGGAGAGAGGGCCGGACAAGGAGAGAGGGCCGGACAAAGAGAGAGGGTCGGACGACGTGACGGCGGAGAACGGGGAGGCGCGGCCGAGCCCCGAGGACGAGGCCTTCATGTCGCAGCTGATAGACTTCTACCGCGACAAGAGCGACACGCTCAAGATCACGCACACGCTCAAACACATGTCGCTGCGATTGATCTACCTGGGCGTGGTGTCGCGCGGCGGGTACGAGGCGGTCTGCCGCGACAAGTTGTGGCGACACCTCTACGCCGACCTCGGCCCGCGCGTGCGACGCCTGTACGAGAGATGTCTCCTCCCCTTCGAGAACCACGAGCGGCGGCTCAGCAAGAAGTACATGAAGGGGCTGAACGGCAAGGTGGAGGAGAAGGCGGAGCCCATAGAGGTGCGGGACTCCCCCCTGCGCGACGAGAAGCGCTTGCGCACCCCCTCCCCCCACCTCGACAACGAGACTGGGGAAGTCCTCAAGGACGACATCTCGGTCACGTCCAAACCGGCGGAGGAGCTCAACCGCGAGTTCCTGGACTCCCTCCCCGAGCCCGACAAGCCCGCCAAGATCTCCGTCAAACCGGTAGAGAAGCTGATAGAACCTGGCCTCAAGAGCGATGCGTTTGATGCTGAATACAAGGACAAAGACGACGACAAGCGAGACGGCTACGACGCACACAAATATATCGGCAACTCGGAGGGCGGAGTCGGGGGGGCGTGGCGCGTCCCGCCGGCGCGCGCGCCGCTCGCCGACCTCAGCCCGCTCGCCGCGCTCACCGACAATCACAACGGACACGCCCAGAAGAGTCGTCCGGCGGGGCGGAGCTCCCTGCGCGCGGTGCGGGTGAAGCCGGCGCGGCCCCCGCCCCACCCCGCGTCACACCCCGCCCCCGCCAACACGCAACCTGCGCCGACGTCGTCCGGCCGGCCGGGCCCCTCCCCGCCCAACAACTTCGGCATCCACCACCCGCCGCCGACCGCGCCCCCCGCGCAGCCTCCCGCCCAGCCCGCACCCCCCGCGCCGCCCCACAGCGACGACGACATCGTCGAGGTCCCCTATAAGCCGAAGAGCCCCGAGATTATCGACCTCGACGAGTACCCGGAGAGCCCGCAGGCCGGCAAGCGGCGCAAGCTGGACATCCTGAAAGAGCGCGGGCTGGAGGTGACGGCCGTGCCGCCGGCGTGGGGCGCCGTGCCGCTGCCCGGGGCGGTGCCGCTGCTACCCGCGCCGCTGCTGCACCCGCTGCTGGCGCCGGCGCAGCTCTACCAGATGTACAACATCCTTCCGCCCTCCTACCCCAACGGCGCGCCGGCGCCCAAGGTGATCCAGGCCGTGAGCGCGTTCGGCACCGCCGGGCCCGAGAAGACCGTTTACGGCAACCCCAAGGACCCGTTCATGCCGCCGCCGCACGTGCTGGGCTGCGCGCCCCTGCGTCCGCGCCCGCTCTCTCCGCCCGCACGCGACGTGCTCGACCTCACCTGCCCGCCGCCCGAGCGCGGCGCCCTCGAGATCGTGCGCGTGCCCTCCGCCCCCCCGCCCGCCGCCCCCGCGCCCCCCGCCGCGCAGAACCTCGCCAAGAACTACACGCTGCTGGACGGCAAGGCTGTGGTCGGCTCCAACCTGGAGATCACGTTGGTCGACCCCAAGGCGCAGACCCCGCCCAAGCAGCGGCCGCCGCAGAAGCGCAACTCGAACGGCAAGTTTGCGGCGAAGACGCCGACGCCGCCGCGCGAGCCCCGCTACCCGCCGGCGTCACCGTCCGGCAAGCGCGCGCCGCCGCCCCCGGCGCGGGACGAGTCGCCCACCGGCTCGACGGGGTCGCGCGACTCCGCCTCGTCGGGCTTCCTCAACGCGTACAAGGCGCCGGGCGGGGCGGGGGGTGCGGCGGCGGGGGCGGGGCTGGCGCTCGACCCGCTGTACGTGAGCTCGCTGTACGGCGGGCTGGGCGGGCTGGGCGGCGCGATGGGCGGGCTGGGCGGGCTAGACCAGCGGCAGCTCGCGATGTACCGCGAGTTCGTGGCGTCGCAGTTCCGCGGCTACTCGGGGCTGCTCAACATCGGCCCGCCCACCACCAAGAATTAG
Protein Sequence
MVQLAPSSGDRATQELGGHETKEFGNLLLKKEEVLWSSASVGFLFVHEVLAINDKVVLRAEDLLSWVCVGREWRWGLRAVWRGDCAPPAPPFPASAPPAPHTAPLHHTRLDFSDVEKEKSAITIDEEAPGVVVFSYPRYCRYRALVARLEGIQARWLRDSLVAALGGYAAPTKNTRILYCKDTFEYPELEGHEFVCNHLSPKLKGRPRGRRRRAADRSPGRSPARSDSRSSESDGRHTPDNKTHRRLSLRNGPDKERGPDKERGPDKERGSDDVTAENGEARPSPEDEAFMSQLIDFYRDKSDTLKITHTLKHMSLRLIYLGVVSRGGYEAVCRDKLWRHLYADLGPRVRRLYERCLLPFENHERRLSKKYMKGLNGKVEEKAEPIEVRDSPLRDEKRLRTPSPHLDNETGEVLKDDISVTSKPAEELNREFLDSLPEPDKPAKISVKPVEKLIEPGLKSDAFDAEYKDKDDDKRDGYDAHKYIGNSEGGVGGAWRVPPARAPLADLSPLAALTDNHNGHAQKSRPAGRSSLRAVRVKPARPPPHPASHPAPANTQPAPTSSGRPGPSPPNNFGIHHPPPTAPPAQPPAQPAPPAPPHSDDDIVEVPYKPKSPEIIDLDEYPESPQAGKRRKLDILKERGLEVTAVPPAWGAVPLPGAVPLLPAPLLHPLLAPAQLYQMYNILPPSYPNGAPAPKVIQAVSAFGTAGPEKTVYGNPKDPFMPPPHVLGCAPLRPRPLSPPARDVLDLTCPPPERGALEIVRVPSAPPPAAPAPPAAQNLAKNYTLLDGKAVVGSNLEITLVDPKAQTPPKQRPPQKRNSNGKFAAKTPTPPREPRYPPASPSGKRAPPPPARDESPTGSTGSRDSASSGFLNAYKAPGGAGGAAAGAGLALDPLYVSSLYGGLGGLGGAMGGLGGLDQRQLAMYREFVASQFRGYSGLLNIGPPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00403554;
90% Identity
iTF_00403554;
80% Identity
-