Basic Information

Gene Symbol
Arid4b
Assembly
GCA_905220515.1
Location
HG992110.1:4204338-4240532[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.1e-30 9.6e-27 93.9 0.1 1 89 258 344 258 344 0.96

Sequence Information

Coding Sequence
ATGACCCCCCTTTCCTACCAGTGGGCACTGATGTCAGTGCCAAATACAAAGGTCACATTGAAAGCTGGTGGTATTACAACCGTCAATGACGATGTCATCAAGGGTACATTACGAGTTGGTAATACTGTTGAGGTCCGGCAGGATCCAAAGAAGGATGCTATTGAGGCAGTCATTACAAAGATACAAGACTGTAGCCAGTATACTGTTGTTTTTGATGATGGTGATATAACTACACTGAGAAGATCTGCATTATGTCTGAAGTCAGGTAGACATTTCAATGAAAGTGAGACCTTGGATCAGCTGCCCCTCACACACCCTGAGCACTTCTCAACACCTGTAATTGCTGGACGACGAGGACGTAGGGGAAGAGCTCAGTCGTCGGAGAGCGAAAGCGAGAGCAGCGGGTCGCGGCGCGCGGCGGACAGCGAGCCGCACGTGGGCCGCGTGGTGCTAGTGGAGTCAGCGGGTGCGGGGGAACGGCGCCGCCCCCACCAGCCCGCCTTCCCCGCCCTCGTCGTCGCACCCACACCCGCCATCAAGGTGAAAGAGGACTACCTGGTGCGCTCCTTCAAGGATGGACGATATTACACAGTGCCCAAGAAGGAAGCCCGTGAGTTTCGTCGCGGCTCGGCGCCGCTAGAGTGGTGCGGCGTGGACGCGGCGCTGCAGTACCTAAACAACGGCGTGCTGCCGCCGCACTGGGACCGCGACTCCATATTCAACGAGCCGAGGAATACTTCTGACGATAGCTCCGACGACGAGCCCCGCGAGGAGAAGGACCACTTCGTTGCGCAGCTGTACAAGTTCATGGACGACCGCGGGACGCCGCTCAACCGAAACCCCACTATCGCCAATAAGGACATCGACCTGTACAGACTGTTCCGAGTTGTTCAGAAAAATGGTGGCTATAACAGAGTCACAAACCAGAATCAATGGAAGACAATAGCGGACAAAATGGGCTTCCATCCGGTCACAACCAGTATTACCAACTTGTGTAAACAAGCATACAAGAAATTCCTACACAGTTTCGAGGACTTCTACCGCAAGTTGGGCGTGACGCTGGTAGCGCACCCGCGCGGCGCTCGCACGCCGCCCGCCGGCCGCTCGCTCATACGCGACCGCGACCGCCAGCCGCCCGCCGCCTCGCCGCAGCCCACCATGCCGCAGACATCGCAGCCTGCTCAGAGAACAAAAGACAAAGAGTCTGACAAGAGCGAGACGGACAAGAGTGAGAAAGAGGAGAAGATAGAGAAGACGAAGGAGAAGATTCGTGCCAGCGACGAGGACGACAGTGCTGACAACCAGCCGCTCCTGCCCACACCCACACCCACACCCAAGGTGGAAAAGGAAAAAGAAAAAGAGAAGGAAAAAGAAAAGGAGAAAGAAAAAGAAAAGGAAAAAGAAAAAGAAAAGGAAAAAGAAAAACCCAGCGTCGAGGAGAAGGTTCCAAGTAAACCTCGCTCGCAGTCCAAAACACGCAGCCTTCCGCCCGTCAAAACTGAACCTCTCGAGAAACGAACGCCCAAGAGAAAAGTTATTTCGTCTAAATTGAGCGACACGGCGAGTGTGGGCAGCGCACGCGCGTCTCGGCGACCTCACGTCTCTACCGACAGTGACAGCTCGGGAAGGGCCTCGAGATGTGGGGTGACAAAGAAAATGCAGAGTCGGCGCAGTCAGAGCGCCAACTCGGCCAGCAGCGGCAACACCATCGCCTCCAACAGCAGCAAGAGACCGCGCAAACGGAAATCCACAGAGCCGTCCACGAGCGAGCCGACGCGGTCAGGTGGCGCGGCGGTGAAGGCCCAAGTCGGCGACAAGCTCAAAGTATACTACGGCCCCACGCAGTCAGAGTCCAAGGTGACGTACGAGGCGAAAGTAATTGAGATATCACCGGCGGGCGCGCTGCGTGTTCACTACACCGGGTGGAACACGCGCTACGACGAGTGGATCAAGCCGCAACGTATAGCGCTCAACGTCACACAGCATGAGGCGAGAAATAAGAAGGGCACAAATCTTAACCGGCGGGCTAGAAGTAAGAGGAATGAAAGAACTGAAGAATCATCAGCTCGCTCAGATTCAGACAGCTCAGACTCTGACGTCAATGAGAAGAGGCCGGCCAAGAAGCTGGACGACAAAAGCACTGTCAAAACACCGACAAGATCAAAGGAAAGTAAACCGAACGATGGCAACAACTCTAATAAGGCGAGGAAAAGACCAGTCCGGACGATATCAACACCACCGACTACATCCAGCCTCCCTAAAAAGCCCCGCGTCGGTGACACTACGCCCAAAGGTCGAGACTACGATCTTAACGAGATTAGATCCGAACTGAAGGGTCTTCAAACGGTCAAACAGGAATCGGAAGAGAACATAAAGACGGAGACTCCACAGAACGAACCTGTGACCGGTCCGACTGCAACGACTGCCGCGCCCGAACCGCAGCCCTCGGTCTCCGTGGAAAAAGCCGAGGACGTTTACGAGTTTAAAGAGCCCGAGCCCTTCGAGCTCGAACTTCACGACGAGAAAAAGAAGAGATCCCACCGTATATTCGACGACATCTCCCCCAACAAATACACCTCGACGTTATCCAAATCATTGAGCGAAGAAATTTCAGACGACGCCATACGACGACCGACTTCGTTTAGATCCCCGTCCCTGTCGCCCTTCCGAGAGTTCGGAGCGAGAGACGCAGCCGAGAGGCAGAGCCCCGACGATAATTCTAAGGACGGCCTGTTCTCCTTGGACGACGACTCGATGCCCGGGGAGGGCAGCTCGGGGCCCATATTCGAGGGATTCACCCCTGCCAAGAACCAGGAAACTTATTCGAAGAAGAGCAAAGTCAGTAAACTGAGAGAACTCATCGACGACTCCCCCGATAGCCCCGCCGACGACGAGCAGTCGTCGGAGGACGATTCAGATGAAGCGCTAAAAGTGGAACCGCGCGAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCATTTTGTCTCTGAAGGACATCCCCGCCATTGAAACTGTTCCTGAGCCTCCTAAAACTCCCCCGCCTCCTCCCAAAGAAACGCCTCCCACGAATGTGCAACCTGCGATAGAAACTCAAACTGAAAGTAAAGAAATTAAGGTCGAAGCGAAAGTGACTTCAGCCCCGCTTCCGACTGCCGAATCTAAACCGAAACTAGATAAATTGGACCCCGTCCCTGTTATATCCAAATTGGAACCTCCTTCAAGTCCTCTGCTAGATACGGAGGAAGACAAATCCGAACCCGACAGCCCCGCGAGAATCGACGTACTACCTGTGCCCCCGCCAGGGTTCCTTTTACAATCTGAAGGTCCGAAAATTGCTGAAAAGTTATTAAAAGCGATCAACAGCGCAAAAATACTGTCCATGTCTCCCACTCCCACCGACGAGAAACCGGAGAGTCCCAAGGAGGAAAGTAAAAAAGTCGAGGAGCCGCCGCCGGCTAAGAGCGACCCGCCGGCGCCTCCGAAACCCGATCTCCTCAAGCCCGTTACCAAACTCGAGGCCGTCAAAAGACTGAGTCCGGCGGAAGTTCGGGAGTCCATATTTGGCGAGCCTTCCAAGATGAGCGATATGAAACACGAGCTGGCCGATATCAAGAAGGTCAAACCGAAGGAGCCGTCGCCGCCTAGGTTGCAGAGCCCCCTCAGTATAATAGAGAGGAGGAAGAGCGTTGCGGAATTGCAGCTGCCCGCACCCGGAAAGAATAAAGTGCTCAGTGACACGATACAGAAACTGTCTAGCCAAATTAACCAGTCGGTGGCCGCGGCGACCATCCCCATTCCGCCCTTCCCCGCCGCCGACCGCAGCGACACCAGCGACTCTGATGACTCAGATCAAAGGCTAATAATCGACAAGCTGTCGGAGGAGTGGAGCGGCGGTAGCGCCGGCAGCGGGCGGCTGGCGGCGCGCGCACGCACGCTACACGTGCACGCCAGCAAGTCGCCCGGCGAGTGGAGCGCGGGCGAGTCTCTGCTCATGCTTGAAGACGCCTGCAAGAACGAGCGTAAACACAGCGCGAGCGTGGTAGTAGCAGGCGGGACGCGCGGGGCGGGGGGCGGGGCCGGTGGGACGGGGGAGGAGGACAACCTGTCGCTGCTGCTGTGCGAGGAGACCATCCCCGGCTCGCCCGCGCCCGACGACCCGCCGCCCCGACATCACCTGCCCTTCGCCTGCGCGCCGCCGCACCATGCCGCCAAGGGCGAGGAGCGTCACGGCGCAGGTGCAACTGCTGGCGCGGGCGGTGCGGCGGGGCGCGAGGTGGGCGCGGCGGAGGGTGCGCGGGGGGAGGGCTGGCGGCGCCGCGCGGACCGCACCCCGCCCACCGCCTCCACCACGCCCGACAGCAGCCTCGACCTATCGCCGCACAGGGAAAGGCGTATATCAGAGCGAGACAGTCCGTCAGAGAGAAAAGAGGATGAAGATGATAGTAACATACAAGATCCTGTTGGACATGTGGGCGGGCGATCACGCAAGGCATCGGAGTCGGGCGCGGGACGCACGCGCGGGCGCCGGCGCCGCGACACGGACGAGCCCGCCCCCGCCACGCCACAGTCGCCCGCCGCTGCGCCCGCACCACTCAAGTACAACTTCTACGTTGAACTGGATCCATCGTGGGATAGTTTGACTCGAATAAAGATATTGACGAACCAAATGGCGGCCCTACGCAAGACGTACAGCTCCGTGCGAGCGGAACTGGTCGCTATCGACCGACGCCGCAAGAAACTGCGCCGCAAAGAAAGAGAAGGCCCCGCGCGAGCACCGGTGATCGCGACAACAATAGAATACAATAGCAATTCCTGGAAATTCCGACTGAAGTATTAA
Protein Sequence
MTPLSYQWALMSVPNTKVTLKAGGITTVNDDVIKGTLRVGNTVEVRQDPKKDAIEAVITKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFNESETLDQLPLTHPEHFSTPVIAGRRGRRGRAQSSESESESSGSRRAADSEPHVGRVVLVESAGAGERRRPHQPAFPALVVAPTPAIKVKEDYLVRSFKDGRYYTVPKKEAREFRRGSAPLEWCGVDAALQYLNNGVLPPHWDRDSIFNEPRNTSDDSSDDEPREEKDHFVAQLYKFMDDRGTPLNRNPTIANKDIDLYRLFRVVQKNGGYNRVTNQNQWKTIADKMGFHPVTTSITNLCKQAYKKFLHSFEDFYRKLGVTLVAHPRGARTPPAGRSLIRDRDRQPPAASPQPTMPQTSQPAQRTKDKESDKSETDKSEKEEKIEKTKEKIRASDEDDSADNQPLLPTPTPTPKVEKEKEKEKEKEKEKEKEKEKEKEKEKEKPSVEEKVPSKPRSQSKTRSLPPVKTEPLEKRTPKRKVISSKLSDTASVGSARASRRPHVSTDSDSSGRASRCGVTKKMQSRRSQSANSASSGNTIASNSSKRPRKRKSTEPSTSEPTRSGGAAVKAQVGDKLKVYYGPTQSESKVTYEAKVIEISPAGALRVHYTGWNTRYDEWIKPQRIALNVTQHEARNKKGTNLNRRARSKRNERTEESSARSDSDSSDSDVNEKRPAKKLDDKSTVKTPTRSKESKPNDGNNSNKARKRPVRTISTPPTTSSLPKKPRVGDTTPKGRDYDLNEIRSELKGLQTVKQESEENIKTETPQNEPVTGPTATTAAPEPQPSVSVEKAEDVYEFKEPEPFELELHDEKKKRSHRIFDDISPNKYTSTLSKSLSEEISDDAIRRPTSFRSPSLSPFREFGARDAAERQSPDDNSKDGLFSLDDDSMPGEGSSGPIFEGFTPAKNQETYSKKSKVSKLRELIDDSPDSPADDEQSSEDDSDEALKVEPREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILSLKDIPAIETVPEPPKTPPPPPKETPPTNVQPAIETQTESKEIKVEAKVTSAPLPTAESKPKLDKLDPVPVISKLEPPSSPLLDTEEDKSEPDSPARIDVLPVPPPGFLLQSEGPKIAEKLLKAINSAKILSMSPTPTDEKPESPKEESKKVEEPPPAKSDPPAPPKPDLLKPVTKLEAVKRLSPAEVRESIFGEPSKMSDMKHELADIKKVKPKEPSPPRLQSPLSIIERRKSVAELQLPAPGKNKVLSDTIQKLSSQINQSVAAATIPIPPFPAADRSDTSDSDDSDQRLIIDKLSEEWSGGSAGSGRLAARARTLHVHASKSPGEWSAGESLLMLEDACKNERKHSASVVVAGGTRGAGGGAGGTGEEDNLSLLLCEETIPGSPAPDDPPPRHHLPFACAPPHHAAKGEERHGAGATAGAGGAAGREVGAAEGARGEGWRRRADRTPPTASTTPDSSLDLSPHRERRISERDSPSERKEDEDDSNIQDPVGHVGGRSRKASESGAGRTRGRRRRDTDEPAPATPQSPAAAPAPLKYNFYVELDPSWDSLTRIKILTNQMAALRKTYSSVRAELVAIDRRRKKLRRKEREGPARAPVIATTIEYNSNSWKFRLKY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01247860;
90% Identity
iTF_01217274;
80% Identity
-