Lcor002209.1
Basic Information
- Insect
- Lysandra coridon
- Gene Symbol
- osa
- Assembly
- GCA_905220515.1
- Location
- HG992085.1:2745430-2769832[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.3e-12 1e-08 36.0 0.0 2 47 200 245 199 247 0.93 2 3 6.9e-09 2.2e-05 25.4 0.0 12 47 244 279 243 281 0.94 3 3 5.1e-21 1.6e-17 64.3 0.0 12 89 278 352 277 352 0.95
Sequence Information
- Coding Sequence
- ATGCCCCCGCGACCGTCGTCATCGCTGTCGGACGGCAGCGGGGCGGCGCGGCCGGCGCCCCCGCCCGCCGCGCCCCCCGCCATGCTGCCGCAGCCCTACCCGCACCACCCCTACAAGCAGGGCTACCCGCCGCAGCCGCCGTACCCCTATCCGCCGCGGAATCACCACCCCTACCCGTACGGGTACCGGCCGACGCCGCCACCGCATCCCCAGCATTATCCGCCGATGAAGGGCGTGGGTGTCCGGCACATGGGTCCGCCGGGCGAGGCGATGGGCCCACCGACGGCGCCGGGCGAGCACGACAACGGCCCCGCCCCCAGCGCGCCCGCCACCGCGCTCGTCACCACCGGGCCCGACGGCGCGCCGCTCGACGAGGGGTCGCAGCAGAGCACGCTCAGCAACGCTTCCGCTGCGTCAGGCGAGGAGTGTGGGACGCCAAAGCGCAAGGAGTACGGCAGCGCGGCGCCGTCGCCGTCGCCCGGCGGGGCGCACGCGCACGACGACTACGACGCTGCCCCCTCGCCCTGGCCCCGCCCCCCGTCCAGTCCCAAGTCGGACTCGCTGGGCAAGCTGTACGAGATGGATGACGCCCCCGAGCGGCGCGGCTGGGTGGAGCGACTGCTGGCCTTCATGGAGGAGCGACGCACACCCATCGCCGCGTGTCCAACCATCAGCAAGCAGCCGCTGGACCTGTATAGGCTGTATCTGCTGGTGCGAGAGAGAGGAGGTTTCGTTGAGGAGCGACGCACGTCCATCGCGGCGTGTCCAACCATCAGCAAGCAGCCGCTGGACCTGTATAGGCTGTATCTGCTGGTGCGAGAGAGAGGAGGTTTCGTTGAGGAGCGACCCACGCCCATCGCCGCGTGTCCAACCATCAGCAAGCAGCCGCTGGACCTGTATAGGCTGTATCTGCTGGTGCGCGAACAAAGCGGTTTCGTTGAGGTGACAAAGAACAAGACTTGGAAGGACATAGCGGGTCTTCTCGGCATCGGCGCGTCGTCATCAGCAGCGTATACGCTCCGGAAACACTACACGAAGAACCTGCTGGCGTACGAGTGCCACTTCGACCGCGGCGGCATCGACCCGCAGCCCATCATCAACCAGGTGGAGGCCAGCACTAAGAAAAAGAGCGGCAAGTCCAACAGCACGAGCAGTGCAGGGTCGTCAAACTCATCAGAACAGTTCGGATCGGGCGGGGCGCAGGGCGGCGCGCCCATGGAGCAGTACCCCGCCCACTATCCGCCCTACCCGCCTCAGCCTAACCAGCCGCAAGGCGGCGGGCCGGGTGGGGACAACCTCGCCGCCTCCAACCCGTTCGACGAGCCGCCGGGGCCGAGGCGACCCCCAGGTTACCAACAGAATTACGGGTACGAATATGGATCTCCTTATCCCACGAACAGGCCTGTGTATCCGCCTTACGGTCCTGAAGGCGACAGGGGTTACGGTTCGGGTGGCGAGTACCGGTACGGCGGTTACGGGGGCGCGTACCGGGCGGGCGGGCCGGGGGGCGGGGCCGCGGCGCCGGGACCCGCCCCCGCGCCCCCCGCCAACAGTGCCCCGCCCGCGCCCGCCCCCTACCCCGAATACTACCGCGCGCCGCACCCGCAGCACCCGCCGCACCCGCAGCACCCCCCGCATCCGCCCCACCCCCCGCACTCGCCGCACCCGCCTCAGCAGCCGCATGAGATGTCCGGCGCGTCGTGCCTCATGAGCTCGCAGCTCGCGCGACAGCTGGTCGCCCCTCTGCCGCCGCCCGTCCGCCATTACGTACGCGACGTTTGTACCACGCACTCAACACCGCTTCCCATCGGCGCCCGCACCGCCCCCCGCGCCCTGCCCACTCACGTCATGGGTGGAGGCGGAGCGAACGCAGCGGCGGCGGCGGGAGCGCCGCGACGGCATCCGGACTTCGCGAAGGTGGAGGGCTACAGTGGGCAAGGCGGCGCCAGTGGTGGGCGGTTCCCCAGCGGCGCGTGGGCCGGGCCCTTCCCCCGCCCCGCCAACCCCGCCTGGCGCCCGCCCGCGCCACACGTCCAGATGCACCCCTGGCCGCAGCAGCCGCCGCACCAGCCATACCATCCGCCGATCGCGGTGAGATGGTCACAAGTTATCGATAGCTATCGTACACATACACCTATCACCCCCTCCACTTTCGACGAGCGATTAAAAATTCGTGCGCGGCCTTTGATGCGACAAGGTATGTGTGTTGTCTGCCCCACCCTACACGTAGTGACGGTCGCGTGTGTTGTAGAGTGGGCCCGCGTGGGGCGCGCCGCGACCGACGCCGGACCTGCCGCCCGCCGCTCCCTCGCCCGTGAGTTCACCTCACCTCATCTCACCTCATTACCTCACGATGATGCTGACAGAGTACACATAACTAAGGAGTACCTCGACTTCAAACAAGCGGGAGCTTCGGGAGTCGGGCAAATAAAGAGGGAGCTGACGTTTCCCCCGGACTGCGTGGAGGCGACGCTGCCGTCAGCGGAGAAGCGGCGGCGGCTGACGAAGGCCGACGTGGCGCCCGTCGACGCCTGGCGCATCATGATGGCGCTCAAGTCCGGCCTGCTCGCCGAGACCTGCTGGGCGCTCGACATCCTCAACGTCCTGCTGTTCGACGACAGCTGCATCCACTACTTCGGCCTGCAGCACATGCCCGGCCTGCTGGACCTGCTGCTCGAGCACTTCCACCGCACCCTGGGCGACGTGTTCGAGGCGCCCACCGGCGAGCGAGAGCCCTGGTACGCGGCGCCGGCCAGCCCCGCCCCCGCGCCCGCCCCCGCGCGCACCACCGACCCGCCCGACCCGGCACACCGCGTGCGCCTGCTCGCCGGCGACAACTACACGCTCGAGACGCGCCGCCGTACGCCCGTCGTCCTCGCGCCGCGCGCGCTCGATGACCCGCCCGACCCTGACCCCGACCCGGCCGACGACGCCGACTCCAACGCGGACCTCCACGACGACCTGCACCTGCAGTTCGGCGGCGATTGTGGCGGCGTCGCTCACCTCGCGCCCTGCTTCCGCGCCGACCTCGTGTATCCGCCGTTCGCGCGCGTGCTGCCCGGTCGCCGGCGCCCCGAGCCTGCCGCTCCCGCGCCGCCGACCGCCCCGCCCCCCGCCACCCCGCCGCCCGTCGAGCGCGCGCCCTCGCCCGCGCCCGCCGACGCCGACAACCTCGAGGCCGAGCCGATGGACATCGAGCCCGAGCGCCGGCCGCAGCTGCAGGTGCGCGACCCCGCCGGCGTGCTCAAGCGCCGCCGCCTCTCCGACTACGAGGACGAGTGCTACACGCGCGACGAGCCCAGCCTCAACCTCGTCGGCGAGGCTCGCGACTCGCTCGCGCGCCGCTGCGTCGCGCTGTCGAACATCCTGCGCGGGCTGACATTCGTGCCCGGCAACGAGGCCGAGTTCGCGCGCTCGCCCGCCTTCCTCGCGCTCGCCGGCAAGCTGTTGCTGCTGCACCACGAGCACGCGCCGCGGGCGGCCCGCGCGCGCGCCTACGAGCGAGCGGCGCGCGACGACGCCGACGCCGACGCCTGCTGCTCGAGCCTGCGGGGCGAGGCCGAGTGGTGGTGGGACACGCTGGCGCAGCTGCGCGAGGACGCGCTCGTGTGCTGCGCCAACGTTGCCGGCGCCGTTGAGCTGGTGACGCAGCCGGAGGCGGTGGCGCGGCCGCTGCTGGACGGGCTGCTGCACTGGGCCGTGTGCCGGGCGGCGGTGGCGGGCGACGCGCCCCCCGCCGCGGGCGCCGCGTCGCCGCTATCACCGCGGCGGCTGGCGCTCGAGGCGCTGTGTAAGCTGTGCGTGACGGACGCAAACGTGGACCTGGTGCTGGCGACGCCGCCGCGCGGGCGGCTGGAGGCGCTGTGCGCGGGGCTGGCGCGCGACCTGTGCCGGCCGGAGCGGCCCGTGGTGCGGGAGTTCGCGGTGAACCTGCTGCACTACCTGGCGGGCGCGGGCGGCGGCGCGGCGCGCGCGGTGGCGGCGCACGCGCCGGCGGTGGCGCAGCTGGTGGCGTTCATCGAGCGCGCGGAGCAGACGGCGCTGGGCGTGGCCAACCAGCACGGCGTGGCGGCGCTGCGCGACAACCCGGACGCCATGGGCACGTCGCTGGACATGCTGCGGCGCGCGGCGGCCACGCTGCTGCGGCTGGCGGAGATCCCGGACAACCGGCCGCTGATCCGGCGGCACGAGCGGCGGCTGCTGTCGCTGGTGATGTCGCAGATCCTGGACCAGAAGGTGGCGCACGAGCTCGCGGACGTGCTGTGGCAGTGCAGCCGCCGTGACGACTGCACGTAG
- Protein Sequence
- MPPRPSSSLSDGSGAARPAPPPAAPPAMLPQPYPHHPYKQGYPPQPPYPYPPRNHHPYPYGYRPTPPPHPQHYPPMKGVGVRHMGPPGEAMGPPTAPGEHDNGPAPSAPATALVTTGPDGAPLDEGSQQSTLSNASAASGEECGTPKRKEYGSAAPSPSPGGAHAHDDYDAAPSPWPRPPSSPKSDSLGKLYEMDDAPERRGWVERLLAFMEERRTPIAACPTISKQPLDLYRLYLLVRERGGFVEERRTSIAACPTISKQPLDLYRLYLLVRERGGFVEERPTPIAACPTISKQPLDLYRLYLLVREQSGFVEVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAYECHFDRGGIDPQPIINQVEASTKKKSGKSNSTSSAGSSNSSEQFGSGGAQGGAPMEQYPAHYPPYPPQPNQPQGGGPGGDNLAASNPFDEPPGPRRPPGYQQNYGYEYGSPYPTNRPVYPPYGPEGDRGYGSGGEYRYGGYGGAYRAGGPGGGAAAPGPAPAPPANSAPPAPAPYPEYYRAPHPQHPPHPQHPPHPPHPPHSPHPPQQPHEMSGASCLMSSQLARQLVAPLPPPVRHYVRDVCTTHSTPLPIGARTAPRALPTHVMGGGGANAAAAAGAPRRHPDFAKVEGYSGQGGASGGRFPSGAWAGPFPRPANPAWRPPAPHVQMHPWPQQPPHQPYHPPIAVRWSQVIDSYRTHTPITPSTFDERLKIRARPLMRQGMCVVCPTLHVVTVACVVEWARVGRAATDAGPAARRSLAREFTSPHLTSLPHDDADRVHITKEYLDFKQAGASGVGQIKRELTFPPDCVEATLPSAEKRRRLTKADVAPVDAWRIMMALKSGLLAETCWALDILNVLLFDDSCIHYFGLQHMPGLLDLLLEHFHRTLGDVFEAPTGEREPWYAAPASPAPAPAPARTTDPPDPAHRVRLLAGDNYTLETRRRTPVVLAPRALDDPPDPDPDPADDADSNADLHDDLHLQFGGDCGGVAHLAPCFRADLVYPPFARVLPGRRRPEPAAPAPPTAPPPATPPPVERAPSPAPADADNLEAEPMDIEPERRPQLQVRDPAGVLKRRRLSDYEDECYTRDEPSLNLVGEARDSLARRCVALSNILRGLTFVPGNEAEFARSPAFLALAGKLLLLHHEHAPRAARARAYERAARDDADADACCSSLRGEAEWWWDTLAQLREDALVCCANVAGAVELVTQPEAVARPLLDGLLHWAVCRAAVAGDAPPAAGAASPLSPRRLALEALCKLCVTDANVDLVLATPPRGRLEALCAGLARDLCRPERPVVREFAVNLLHYLAGAGGGAARAVAAHAPAVAQLVAFIERAEQTALGVANQHGVAALRDNPDAMGTSLDMLRRAAATLLRLAEIPDNRPLIRRHERRLLSLVMSQILDQKVAHELADVLWQCSRRDDCT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00288640;
- 90% Identity
- -
- 80% Identity
- -