Lcor012200.1
Basic Information
- Insect
- Lysandra coridon
- Gene Symbol
- -
- Assembly
- GCA_905220515.1
- Location
- HG992103.1:3455348-3456604[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 7.3 8.3e+03 -2.5 2.3 11 23 53 65 48 69 0.86 2 3 4 4.5e+03 -1.6 0.0 3 15 325 337 323 341 0.80 3 3 5.4e-08 6.1e-05 23.6 4.6 27 63 334 370 330 371 0.86
Sequence Information
- Coding Sequence
- ATGGAAGATCGTAATAAGCCAAATACTCTCCGGGTGGGTCCCGGCTCCTCAGGAGCCGGAGAATCCCATGCGCCGTCTTCGGACGGTGGCCGACCCTCATATACGGAGGGGCCACTTATTGCGAGGAAGGATGAGGGGGCCGCTAAGGCGGCGAAGAAAGAAGAGGAGGCCGCTAAGGCGGCGAGGCAGAGGGCCATTTTAGCCGCATTGAGCGGCGATGGCGGAATGAAGAAGATCGACAGCCCGAAGCCGGCGCCCATTACCGCGCCGGCGAAGGAGCTGCTTACTGATGAGGACGTGGACTTCAGCCAACCGCAGCCCAACGGGGTGGAGCGGAACCTGAAGCTCCTGCAAAAGATGAAAGACAAGAATCTTCCGCGGGTTCTTTTGACCCGCGATGTGATCGTGCCACCCCCAAGTACCGGTCGAGACGACTTTACTGGTAGAGACTCCCCTCGCGGTCGAGTCTCCCAGCACGGCTATGGCGCACATGGACGTGACAGCGAGGACTGGCTCTCGGACTCCAGTGAGATGTCCGGCATGTCGCTGGACTCCGTGGGCCTGCCCGCATTCCTGGACAGGACACGCCGAAAGAGGCGATCAGACGAGGACATGGCACCGCCCCTTGGTAAGGGAGCGATGCCGAAATCCAAAAGAGGACGCGGCCGCCCGCCTACGACTGGACAGTACGTCGGTCTGGCGAAGGCGCAGGCCGATTATAACCAGCAGAAGGAGGAGGTCCCTCGACCTCGGGCGGAGGAGGAGGTGGCCGAGGCGGCCAGGGCTGCTCGAGAGACGCGCTCTTCGCTCCTCGCAAGCTCTGCGCCCATGGAGAGTGACAAGCCGGAGCAGATAACCAACGCTCTGGCTCAATGCGTCGAGACTTCGTTGGCTTCGATCATTATGGTCGCAACGAAGTCCAGAAATTTGAAGGGGACGTCCCAATGTCTTCTCAAGGAGGCGGTCAGCGACATACGTGCGACCGTCGCCAAAATGAAGAACCGCGGAGCGACGGACGAAATAAGAGCCCTCGAAGCTCAAAATGCGCAGCTCCAACAGGAAGTGGAGTCCTTGCGCAGAGAAGTCGAGGGCCTACGTCGACAGATGTCGAAGCCGGCTGAGCAAGACATGCGCCAGCTGTTGTCTGAAGTCTCTCGTTCTAACGTGGAGACCTTCAGGCGGACAGAGCCCGGAGTGTTACTTCGGCCGCCGCTGAGAGCGTTGAGGCATCACCGGGCGAGACGCCGGGACCCCTGA
- Protein Sequence
- MEDRNKPNTLRVGPGSSGAGESHAPSSDGGRPSYTEGPLIARKDEGAAKAAKKEEEAAKAARQRAILAALSGDGGMKKIDSPKPAPITAPAKELLTDEDVDFSQPQPNGVERNLKLLQKMKDKNLPRVLLTRDVIVPPPSTGRDDFTGRDSPRGRVSQHGYGAHGRDSEDWLSDSSEMSGMSLDSVGLPAFLDRTRRKRRSDEDMAPPLGKGAMPKSKRGRGRPPTTGQYVGLAKAQADYNQQKEEVPRPRAEEEVAEAARAARETRSSLLASSAPMESDKPEQITNALAQCVETSLASIIMVATKSRNLKGTSQCLLKEAVSDIRATVAKMKNRGATDEIRALEAQNAQLQQEVESLRREVEGLRRQMSKPAEQDMRQLLSEVSRSNVETFRRTEPGVLLRPPLRALRHHRARRRDP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01217230;
- 90% Identity
- iTF_01217230;
- 80% Identity
- -