Lbel011920.1
Basic Information
- Insect
- Lysandra bellargus
- Gene Symbol
- -
- Assembly
- GCA_905333045.1
- Location
- HG995320.1:14596364-14623006[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.48 40 5.6 0.4 1 23 369 392 369 392 0.85 2 13 0.0013 0.11 13.7 1.0 1 23 489 512 489 512 0.95 3 13 0.24 19 6.6 0.2 2 20 550 568 549 570 0.91 4 13 8.8 7.2e+02 1.6 0.7 1 13 575 587 575 597 0.79 5 13 0.085 7 8.0 0.3 1 23 1241 1263 1241 1263 0.95 6 13 8.8 7.2e+02 1.6 0.5 2 23 1269 1290 1268 1290 0.92 7 13 1.3 1.1e+02 4.2 3.4 3 23 1382 1402 1382 1402 0.95 8 13 0.015 1.2 10.4 1.3 2 23 1418 1439 1417 1439 0.97 9 13 1.7e-06 0.00014 22.8 2.1 1 23 1445 1467 1445 1467 0.99 10 13 1.6e-05 0.0013 19.7 1.7 1 23 1472 1494 1472 1494 0.97 11 13 0.22 18 6.7 0.4 2 23 1501 1525 1500 1525 0.92 12 13 0.19 16 6.9 0.3 1 19 1530 1548 1530 1549 0.93 13 13 0.02 1.6 10.0 1.5 3 23 1562 1583 1561 1583 0.97
Sequence Information
- Coding Sequence
- ATGGAACGTCATAAATTATTCAACAGAAGGCAAAAATCTGATGAAAAAATTGATGACTATGTCACTGATTTAAAAAACATAGGCAGACAATGTAATTTTGATAAATTGGAAGATGACCTTTTAAGAGATATATTTAGTTGGAACTTACACTCAAAAAACCACTATATACAAGAAAAAATACTTATTCAAAAGCCGGAGACACTGGAACAGGCAGTTCAACTAGCCAAACAGATGGAGTGCACAAAGCAACAAGCAAAAACATTGGAGGAGTCATCTAATTCCTTCGTAGGACAAGTACAATCTACTTCCAGTTATAAGAAGCAGAGCCCATCCATCCTGAACACGACAGCAAGCAGCGGGAATAGTCTTGTGGTTCAGGGGGCTATTAACGGGTCGAATTGCAAAATGACTCTAGACACGGGAGCCTCTAGAACAATAGTGAACCCAAATTTGAAAGCGGTGGAGGATATTTTGAGTAAGATAACTAGAAAAAAGAAAACTACTCAAGTGAGTCAAGAGACACCGGTACAATTTGATATCAAAATTGAAGTCGAAGAGTTTGATGAGCAACCGAGCACATCCAGTCAAAGCCACAACAAGAACCCAAAGGGATCAACATCGCAAAGCCATGGAACAACAAATACAACGAAACAGAATAACCAGAATATAAACAAGATTCAAACAACTGCAAAACAACCTCAACAATCACTTTTGATCCAGAGATCTTTAGGACGTCAGAACCTTCAACTCCCAAAGAGTAAAGATAGACTTTGCCAAAAATCTATATCACCAAGTCCTCAACCGAATACATATAGAAACAAAAATAACCTAACGAATTCACAATCTACTGAACAGAACAAATCAACTAATTCATCTCTATATCAACATTTTATTCTTGAGGCTCATAATATTAAGTCAACAATGCAAATCCTCTCCAAGTTTGGGAATGTTGCCGATAATTACATATACATCTTGATGAAAAATTATGAGAACATACCAACAGTGCCAGACATTACTCACGTACAGATGGCTCTACAAAAGGTTCTCGAGGTATGGAATAACTGGTTTCTGAAGGATCCTTTAAACCGAGGGGCCCCCTTGCTGTACAAGTGTAAAGATTGCGGCTGGGCCTGGTGGCATCTAAATTCTTTTATGGAACACATCAGAAACATACACGAGCGTGAAAAGTGGAAGCTGAGATTCGAGTTCGAAGCGACCAATGGGGAGTCCTACATAGCCTTGAAAATATCAAATAAATTGGATAAATCTCTGCCGGCGGTGAGAATAGTGAACGCCCCATGCTGGAGGTGTGGCATGCTGCCCGGAGACAAGTATCGGAACTTCAACACAACCAGCCTGACGTACCACTGCCAGTGTGGGGTCCAATTCGCCATGTGCCACGAGTATCGCCTCCACCTGGACGTGTGCCCCAATGCCGTGCCCAAGGTCAAGAAGCTAGTAAACTACAAGTGCTACTTGTGCTTCCTGAGGTTCGACACACCCGAGGAACTGCAGCGGCACAGGCTCCTGTCCCACAGCGTGCGGTCAGACCTACCCGCGTCCTGGACGCCGGTCAAGAAGTGCGTTAACTGCTGCATGTCGCATATCGACGGCATAAGTGACTGTCCCGCCGTGAAGAGAATGGTGCCCTGCGGATTTTGTACGAAGATGTTCAGCACGAACACGGTGATGAATCTGCATCAGAGCTTCTCCCAAGAGAACTACAAGTGTAGGCTATGCGATGAAGTCCTTAAGAGGGAGTGTATGGAGATGCTGCACCTAGTAAAGCACACCTACAATTATATAGTGCTACTTAAGTGTATGATTTGCAATAGCAGTAATACATTCTTCCATAATGATACTGCATACAATTTACATCTCCTGAGCAAACACCCTGGTAGTGACCAACCCGCCATGAAGGTTCCAGTGCCACTGAAATGCCTTCAAGAATCGGGGTACAATGTGCAAACTCTCGAGACGGACAAAGTGGTTGTGCCACCAAGGTTGTCCCACACATATGAGGTGCCAGTGACAATACACGGTAATAAATCCATCTTGAAAAGAATGGCCGGTCCAAAAGAATCTCCGCGTAAGAGAGTGCGAAAAACAATAAATAGCAGTCACGAAAACGAAGTTAATACTATGGATGTCTCAGAAATAAAAGTTGAAGAAGATATAGAGGATTTTATTAATACTGAAATGGAAATAAATGAAATGATTTTGTTGAACAATAAAGATAGTGAATTGCTTAGAATAAAATTAGAAGATTTTGAAGATCTATCAGAAGGAAATAAATTAAGTGATCCAAATAATGAGGGTAATCCAAATAACAATTCCAATAAAAATAACCCAAATACTTCAAATGGTTTAAAAGATAAAAGTCTCCAGCCGTTTAATGATGAAATTAATAAAACTGAAGGCTGTGATAAAGTCTTGGAAATAAGAAAAGAAAATACTGAAGATGATACTTCGAAAAAGGGAGAAGAATTTAATATTGCAGGTACTCAAAATGGTTCAGACATAAATTCAAATAAAAATAAGCCAAACGCATGTAGCAGCAATAAAAAAGAAAATTGTGATAGTAATAGAATAAGTCTTACAAATAAGGATCATAAATTGATAAAAAATAATAATGATAAACTAAATGCAACTGCTAATTGTAATAAACCTGTAAAAGAAAATATTATTTTAGAAATGAGGAATGAAGCAGATAAAAGTAACGGAATGCTAGATTTTGAATTACAAATTCAAAAAACCATAATACATTCAAATGCAGCATGCAATGACCCTACTCATGTGATAACTAATGTCATCGTCAAAAACAAAACAGACGACAACTACATAACAAAAGAAAATAATACATCAAGTAAACCAATACACACTCATGAACCTCACAAAGAAGATGTTGTGAATTCTAATACCGAAGAAAAGGAGTTACACAATTCAAATGTTGAAAAACGATCAGACAACAAAGAGGATAGTGTCCCACAAAATAAGTGTGTAGTAAACCAAAAAGAATTAAACGTTAATACCAATAAAGATACTCAAGAGTGTGAAAAGAACAAAAACATCACTACAATAAAGGTTTTGGATAAACAAGGAATTAATAGCAGCAAAAAGAATGATTCGCATGAAAAAGACATCCCTATCGAAACTAGTATTAATCACAATGTACCTGATAAAGAAACACTCGACAGCAAACTAGTAATTGATAACCCTGGACCAAGTAAAACGATAAAAGTAGAGCAAGATAGCTTAATAGGGAATGATGTTAAAATAAAAGAAGAAGTATTAGATGATGACACGGATGATGAAAAATTAGTAATAGCAGAATTCACCGACCTAATCACTGATAAATCTGTTACATTAGAAGTGAAAGCGGAGCCGCAAGAGATTTTTGAAAACGACATGATCGATTGGGGGAAGGGGAAGGATAATACTGATAACGGGGATGTCGAGGTAGATGATGATCGAGAGAATTCTGGTAGATACATAACCTGGACTCCTCATCTGGGTGTTGTCAGAGGTGGTGTGAATATGGAAGAAGAGAGCGACGATGAGGATTTGCCCCTTATGGATATCAAGACGAAGAAAAAGAAGATGTACGCATGCAAGCGGTGTAAATTCAATGGATGTCACATGGAATACCAGGAACACAAAAAAATGTGTGTCAGACAAAAGAAATACAAGAAAAGGTTCTATCCGGAAGATTGTGACAAATACGAGTGTACGATATGCGAAAAACAGTTCGGAGCCCTGATCAAATACTTGAAGCATCTCACCGTGCATGGATACCAGTGGCTACAGTGTCCGGAGTGCATGGACAATTTCCCCACCAGGGCCAGACTGTCACAACACGTTTTACACCACATCAACAAGAACTACGTGCCGCTCCGGGGCATCACGTCAGCGAAAGACTATGGGTTTACGATGCAGTGCACCCAGTGTGACGATGAGGTGCAGCCGCACGAGTTCTTCAGACACTGGGAGCGACACCTGGCGTCGGCGCGGAGGTTGCAGAGGAAGCCACCGCTCGTCATAGAGGATTGTGCACCACATTCACCCATGCTGAGAGATCTGATAGCGATACTTCTAGACCGCTACACCATCAGAGACGACGACGAGCACAAGCCGCTGCGGTGGTGCAAGATGTGCAATCGGCCGTTCACGCGGGACAACGAGTGTAAGCGGCACTACATTGAACACCTGCTCGACGACGCCTTCTCGCACATGTCTGACACCCAGGGGTTAAAGTGTCAGATCTGCGGGGAGATGTGGGAGAAGTGTAGCGATTTCCGCCTCCACATCCGCACGCACGCGTCGATGCCGGTGTACCGGTGTGAGCTGTGCAGCAAGACGTTCAGTGACTCCAGCAACTTCGCCAAGCACCGCAAGGTGCACAACCTGTGCAGCTTCACCTGTGACAAGTGCGGGAAGAAGTTCAATAGGAAGATATCGCTCGTAGAACATATCAAGTTCCATGAGCAAACGCAGCCGATAACTTGCGAGTTCGAGGGGTGCTCCAAACTGTCGTACACGCAGAGCGCTTTCACCAAGCACCTGAAACTCGTTCACTACGGGTCCAAGTACCGCTGCCAGATATGCAAGAAGACACTCGGCAGCAACAAGGAGATGTGGGATCATAAGTGGCAGGAACACAGGTTGCGGAAAGTGATCGCGGACTGTCCAATCTGCCATATGCAGTTCCGGAAGTATTTGGACGTGAAGAAGCACGTTCGGAGAGTGCACGCCGATTTACCCGACCTCAAGAAACTCAACAAACTCTCGCCCGAGGAGAAGATCGGCAACGTCGCACGTCTCGTACACGATGTCAGACTAGACGCCGAGCGGCTCAATAAACTCTCGCCCGAGGAGAACGGCAACGTCGCACGTCTCGTACACGATGGCAGACTAGACCCCGAGCGGCTCAACAAACTCTCGATTGAGGAGAACGGCAACGTCGGACGTCTCGTACACGGTGTCATACTAGACCCCGAGTCAGAAGAGGACATTATAAAGATAGAGATAGAAGATATTTAA
- Protein Sequence
- MERHKLFNRRQKSDEKIDDYVTDLKNIGRQCNFDKLEDDLLRDIFSWNLHSKNHYIQEKILIQKPETLEQAVQLAKQMECTKQQAKTLEESSNSFVGQVQSTSSYKKQSPSILNTTASSGNSLVVQGAINGSNCKMTLDTGASRTIVNPNLKAVEDILSKITRKKKTTQVSQETPVQFDIKIEVEEFDEQPSTSSQSHNKNPKGSTSQSHGTTNTTKQNNQNINKIQTTAKQPQQSLLIQRSLGRQNLQLPKSKDRLCQKSISPSPQPNTYRNKNNLTNSQSTEQNKSTNSSLYQHFILEAHNIKSTMQILSKFGNVADNYIYILMKNYENIPTVPDITHVQMALQKVLEVWNNWFLKDPLNRGAPLLYKCKDCGWAWWHLNSFMEHIRNIHEREKWKLRFEFEATNGESYIALKISNKLDKSLPAVRIVNAPCWRCGMLPGDKYRNFNTTSLTYHCQCGVQFAMCHEYRLHLDVCPNAVPKVKKLVNYKCYLCFLRFDTPEELQRHRLLSHSVRSDLPASWTPVKKCVNCCMSHIDGISDCPAVKRMVPCGFCTKMFSTNTVMNLHQSFSQENYKCRLCDEVLKRECMEMLHLVKHTYNYIVLLKCMICNSSNTFFHNDTAYNLHLLSKHPGSDQPAMKVPVPLKCLQESGYNVQTLETDKVVVPPRLSHTYEVPVTIHGNKSILKRMAGPKESPRKRVRKTINSSHENEVNTMDVSEIKVEEDIEDFINTEMEINEMILLNNKDSELLRIKLEDFEDLSEGNKLSDPNNEGNPNNNSNKNNPNTSNGLKDKSLQPFNDEINKTEGCDKVLEIRKENTEDDTSKKGEEFNIAGTQNGSDINSNKNKPNACSSNKKENCDSNRISLTNKDHKLIKNNNDKLNATANCNKPVKENIILEMRNEADKSNGMLDFELQIQKTIIHSNAACNDPTHVITNVIVKNKTDDNYITKENNTSSKPIHTHEPHKEDVVNSNTEEKELHNSNVEKRSDNKEDSVPQNKCVVNQKELNVNTNKDTQECEKNKNITTIKVLDKQGINSSKKNDSHEKDIPIETSINHNVPDKETLDSKLVIDNPGPSKTIKVEQDSLIGNDVKIKEEVLDDDTDDEKLVIAEFTDLITDKSVTLEVKAEPQEIFENDMIDWGKGKDNTDNGDVEVDDDRENSGRYITWTPHLGVVRGGVNMEEESDDEDLPLMDIKTKKKKMYACKRCKFNGCHMEYQEHKKMCVRQKKYKKRFYPEDCDKYECTICEKQFGALIKYLKHLTVHGYQWLQCPECMDNFPTRARLSQHVLHHINKNYVPLRGITSAKDYGFTMQCTQCDDEVQPHEFFRHWERHLASARRLQRKPPLVIEDCAPHSPMLRDLIAILLDRYTIRDDDEHKPLRWCKMCNRPFTRDNECKRHYIEHLLDDAFSHMSDTQGLKCQICGEMWEKCSDFRLHIRTHASMPVYRCELCSKTFSDSSNFAKHRKVHNLCSFTCDKCGKKFNRKISLVEHIKFHEQTQPITCEFEGCSKLSYTQSAFTKHLKLVHYGSKYRCQICKKTLGSNKEMWDHKWQEHRLRKVIADCPICHMQFRKYLDVKKHVRRVHADLPDLKKLNKLSPEEKIGNVARLVHDVRLDAERLNKLSPEENGNVARLVHDGRLDPERLNKLSIEENGNVGRLVHGVILDPESEEDIIKIEIEDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00404306;
- 90% Identity
- -
- 80% Identity
- -