Lbel010734.1
Basic Information
- Insect
- Lysandra bellargus
- Gene Symbol
- -
- Assembly
- GCA_905333045.1
- Location
- HG995349.1:9546907-9549741[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-07 0.00016 22.0 0.0 3 42 16 55 14 58 0.87 2 2 4.5 2.5e+03 -1.0 0.1 25 40 767 782 766 783 0.88
Sequence Information
- Coding Sequence
- ATGCCGTATAAATATATTAAAAAAAAAGAACCAAAGTACACACAAAATGATATGGACAAAGCAATCCAAGACGTTAAAAATAATGGGCTGTCAATGTACGCTTCAGCGAAAAAGTATGGAATCCGCACAACTACTCTTTATGACAGAATCAAAGACAACGTTATGTCAAATAATGTGGGTAGACCGACGGCTATTCCACCTGCGTTAGAAATGCAATTGGCAGATAAACTTAAAATTATGGAGAAATGGGGGTTTGGTTTATCAAGACAAGAAGTGATAATGCTAGTAGAGGAATTCGTAACAAAGAATAAATTGGACACCCCATTCAATAACAACAAACCAGGCAAAGATTGGTTTATTGGTTTTAGAAAAAGGAACACATTGTCTATTAAAAAAGCGCAGCCCGTAGAATACGTACGGAAAAAAATGACAGACCCTTTTGTTGTCTCGGAATATTTTAAGATGCTAGAGGAAACGTTGACTTCCTTAAATCTATTCGAAAGCTCACACTTGATATGGAATTTAGACGAGACTTCGTTATCACTTGATCCAGTCCGAACAAAAGTAGTTGGTGCTATTAACAAGCCATGTTCCAGGACCACTTGCGGGACTGGAAAAGAGAACATAACCGTACTGACGGCTGTGAGCGCCGCTGGCAAAAAGGTGTCGCCATTAATAATATTTAAAGGAAAAAATATATGGGATGAGTGGATGGCACCAGCAGAAAACTACGATTTTGAACTGGCATATGCAGCTAGTACCAAAGGATGGATGGAATCAGAAATATTTTATAACTATATGAAAAAGATTTTAATTCCAGCTCTTGGTGAAGAACGTCCTGTGGGCGTAGACCCTGATGTGATTAAGAGTGGTTTTAAAAAGGCTGGCATTTACCCATACGACCCTCAAGTGATACCAGTAGATAAATACGATCCAGCTGCGTACAGAAGATTTCAAAAAGCACAGTTAAGTCTCCAAAATCCGAAGACGCTTAAAGAACGTTTTCTTGATGCCATAAATACAGAAAACACTGCCAATCCCGATCAAGAAAGTACCAAATCTTATGCAGAAAACCCTACATATCTGAAAAAACTGGTAAAAAATGACGATCAGGCTCAGTCATTTGTAGCATACCATACATTTGATATGAAGAGAGAGAGAAATACATTTAATATACCAAAATGCCTTCAATGTGATAATTCTCAGCCTAAAGAAAATAAGACTTCGCGTATAAAAATTATCGAGGATATAAAAGTAAATTTTGAAGAACTATTGCTAGAAAAAATTCGCCAGGATAAAAAAGAGAATACTTTAAATAAAAAAAAGCGAGTGGCTAAAGGGGCTGAGGTTATCACATCTACAATGAAAAAAAATGCAGATGAAACACCACCGGTTAAATATGTATCAAAGAAGCGGGACTTGAAGAACAAAGGAAAGTTAAAGGCAAAACAAACTGATAAGATTACACTTGCAAAACCAGGTACTTCAGAAATAAAATATAAAGAAAAAGAAGGCAAAAATAAATTAAAAAGAAGACGAAAAGTTTCAGACAGCTCTACAAGTGTGTCCGATATTATTAGTTTACACAGCGAAACCGATTTTGATTTTGTTGATAATTGTGACTATGAAGCATTAATTGACGGTTTCTGGGGTGAAGAGTATTTGGAAACAGAAATAGAAAAGGAAAAACCGCAAACAGAACTAGAAGGTGAAAGTCCAAGTGAACATAAAATATTGTGTGATATTACAGGTAAGGAAAAAATATTATGTGCTGAAGATTTAAAAACTAAAGAAAAAGGGGAAGAAAAGAAAGGAAAAGGTAAAGGCAAAAAAACAAAGAATGGAAAGGAAAATTATCATTTAAATGGAGATTGTGATAATCAAGAAATATATAAGGCTGCCAAAGTTCAAGAAAGCTGTAGAGAGAAAAATAAGACTGAAAATAAAATTGAATTTATTAACAAGATTGACGATGACGAAGAAGCACCTAAAGAGAAAAAAAATAAACTGAAACAATATATGACTGACAAACTTCCTGAAAATACTGATGAGAACCAAATAGAACAAAACAAGGCTGATGATGACGAAGAAGCACCTAAAGAGAAAATAACGAAACTGAAAGAATATAAGACTAACAAACTTCCTAAAAATACTGATAAGAATCTTATGGAACAAAACAAGACTGATGATGAGGAAGAAGGAAATAAAGAAAAAAAAATGAAACTGAAACAATATAAGACTGACTCTCAAAAAACTGATGATAACCAAATAGAACAAAACAAGACTGATGATGACGAAAAATATAGCTTAAATGATACCGTACTTGTAAGATACTTTAATAGAAAGAAATGGACTTACTACATTGGATTAATTGAGAATATGAAACAGAAAGACGACGAAACCTACTATACCATCAACTTTTTAAGAACAGTTAAGAAGCCAAGTCTTAAATTTGTACAAACGAAGAAACGAGATTATGACGAAATTACAGAATTACAAATTGTAAAAAAAGTAATATTAGAGAAAAGCTGTGACAATGAAAAAGAATTCATGTTATTAAATGATGACAGCCAAATGTTTATAGACTAA
- Protein Sequence
- MPYKYIKKKEPKYTQNDMDKAIQDVKNNGLSMYASAKKYGIRTTTLYDRIKDNVMSNNVGRPTAIPPALEMQLADKLKIMEKWGFGLSRQEVIMLVEEFVTKNKLDTPFNNNKPGKDWFIGFRKRNTLSIKKAQPVEYVRKKMTDPFVVSEYFKMLEETLTSLNLFESSHLIWNLDETSLSLDPVRTKVVGAINKPCSRTTCGTGKENITVLTAVSAAGKKVSPLIIFKGKNIWDEWMAPAENYDFELAYAASTKGWMESEIFYNYMKKILIPALGEERPVGVDPDVIKSGFKKAGIYPYDPQVIPVDKYDPAAYRRFQKAQLSLQNPKTLKERFLDAINTENTANPDQESTKSYAENPTYLKKLVKNDDQAQSFVAYHTFDMKRERNTFNIPKCLQCDNSQPKENKTSRIKIIEDIKVNFEELLLEKIRQDKKENTLNKKKRVAKGAEVITSTMKKNADETPPVKYVSKKRDLKNKGKLKAKQTDKITLAKPGTSEIKYKEKEGKNKLKRRRKVSDSSTSVSDIISLHSETDFDFVDNCDYEALIDGFWGEEYLETEIEKEKPQTELEGESPSEHKILCDITGKEKILCAEDLKTKEKGEEKKGKGKGKKTKNGKENYHLNGDCDNQEIYKAAKVQESCREKNKTENKIEFINKIDDDEEAPKEKKNKLKQYMTDKLPENTDENQIEQNKADDDEEAPKEKITKLKEYKTNKLPKNTDKNLMEQNKTDDEEEGNKEKKMKLKQYKTDSQKTDDNQIEQNKTDDDEKYSLNDTVLVRYFNRKKWTYYIGLIENMKQKDDETYYTINFLRTVKKPSLKFVQTKKRDYDEITELQIVKKVILEKSCDNEKEFMLLNDDSQMFID
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00933667;
- 90% Identity
- iTF_00933667;
- 80% Identity
- -