Lbel028585.1
Basic Information
- Insect
- Lysandra bellargus
- Gene Symbol
- -
- Assembly
- GCA_905333045.1
- Location
- HG995357.1:4303270-4304079[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-07 7.5e-05 23.0 0.0 4 38 15 50 12 55 0.90 2 2 2.2 1.2e+03 -0.0 0.1 17 25 106 114 104 114 0.88
Sequence Information
- Coding Sequence
- ATGGATTACCCCAACAAAAAGAATAGAAAGTACTCGGAGCTTGATCTCAAAACCGCCATTGAAAATGTTTTGAGTTCAAAAATGACAGTTTACAGAGCGTCTAAGGAGTTTAAGATTCCATGGTCGACGTTAAAGGAGAATGTGATGAAGTACAAAACTCTACGAGAGGGTAATCAAAATACACAGATAGTAATGTCCAAGATAGGGAGACCGTTTGCGTTACCTGTTGAAATGGAACAAAAGTTATTGGCCTACATAATTGAAATGCAAGAACGTGGCTTTGGTCTTACAGTAACAAAAATAAAGCAAATTGCATTGTCTTTAGCAAAAGCTGCGAATATAAGCTGCACATTCAATGACGAAAAGGGATCTGCAGGTTGGAATTGGTGGGTGAAGTACAAAGCAGCTGCCGTTTCTGGTACATCAGGGACTAAGCGACTAAAGACAGCTAACAAGAACATTGATGATGCTGTTGTTACCGTCACGTCTGGAACTCAGCGATTGGCGAAGAACTTATATAACACTGCTATTCCTAGCACATCAAAATTTGAAAAAAAAGCGAAAAGAAGTAATAGAGCAAATAAAACGAGCACTGCACCTGCGAAGCAGAAGAAAAATAGATCTGAAGACGACGATTGGCTATGTGCAATATGCAACAGATGGTACTCAGAAGATGCTGCATCTAAAAATGGAGCAGACTGGATTTCTTGTTCCTTCTGCATCAAAACGTATCACGTACATTGTCAAACTCAAGAATGTGAGGCTAATACGACGATTTTTAAGTGTGATATGTGTTACGCCCAAGAATAA
- Protein Sequence
- MDYPNKKNRKYSELDLKTAIENVLSSKMTVYRASKEFKIPWSTLKENVMKYKTLREGNQNTQIVMSKIGRPFALPVEMEQKLLAYIIEMQERGFGLTVTKIKQIALSLAKAANISCTFNDEKGSAGWNWWVKYKAAAVSGTSGTKRLKTANKNIDDAVVTVTSGTQRLAKNLYNTAIPSTSKFEKKAKRSNRANKTSTAPAKQKKNRSEDDDWLCAICNRWYSEDAASKNGADWISCSFCIKTYHVHCQTQECEANTTIFKCDMCYAQE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -