Lbel013577.1
Basic Information
- Insect
- Lysandra bellargus
- Gene Symbol
- -
- Assembly
- GCA_905333045.1
- Location
- HG995323.1:3089448-3092909[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.1e-09 3.3e-06 27.4 0.0 1 39 21 59 21 63 0.90
Sequence Information
- Coding Sequence
- ATGCGTATTGCAATACCGATGCCTTTCTCTAAGTCTGAAAAGAAGAAATCTGTCAAATATCGACCTGAAGATTTAGAACGAGCGTTAAAAGAAATAAGAGATGATAAGAAAGGTATAAGGGAGACTTGCAGAAAATACGGAATACCCAGAACAACTATTCAAGATCGCTTAGCAGGTAGGAGACACGATGTGCTACAAGCCAGGGGACCGGAGCCATATTTAGGAGTTGAAGGAGAAAAAAAGGTGGTAAATTGGATGTTAAACATTGCTAAATGTGGATTTCCAATAAAAAAACAAGAGCTGCTGGATACCGTGCAAAAAATTTTTAAAGATTTGGGTAAAAAAACCCCTTTTAAAAACGACCGTCCAGGACAGACCTGGTACCATAACTTTTTAAAAAGAAACCCTGTAATCAGTGATCGTGTTGCTGAGAGTATTAATAAGGCTCGCGCACGTGTTACTGAAGCGTCTATTCGGTTCTGGTTTAGCGAATTACAAAGCTATTTAGCAGAAGTTGGAGCGCTAGAGATATTGGATCATCCCAACAGGATATATAACGCTGATGAAAGTGGTTTCTGCCTGTGTCCAAAAACAGGCAAAGTTTTAGGACCAAAAGGGTATAAGAATCTTTACCGGATTAATGCGGGTAGTGAGAAGGACAATTTAACGGTGATGTTAGCGTTCAATGCGTCTGGACAAATTTGTCCACCACTGGTTGTATTTCCTTACTTAAGACCACCAAGAGCAGTAAGTGAAAGTATGCCTCCAGATTGGTGCTTAGGAAGAAGCGAATCCGGATGGATGCGTGGTGAAGTCTTTTTTGAATACATGGCAAATGATTTTAACAATTGGCTGGAAGGAAATAATATCAAACGCCCGGTTTTGTTCCTAGTTGATGGTCACAAATCACACATGTCTTATTTACTAAGTGAAATATGTGATAAATTAGGAATAATTTTATACGCACTCCCACCCAACACAACTCACATGCTGCAGCCGGCCGACGTCAGTGTCTTTGGCCCAATGAAAGCTTATTGGCGTAGCGTCGTCCGCCAATACTTAAACAAACCAGAAAATATTGATAGACAGGTTACTAAAACTACTTTCTGTCCTTTATTTAAGGAAATAATAAGTAACCCACAGTTGCCAACAAACATAATAAACGGATTTAGAAAATGTGGGCTTTATCCTTTTAATCCAAATGCAGTTGACTACACAAAATGTGTCAGAAACACAATCATGAATTTAAATAGACAACAGCGAGTGACAGTGCAGCAAGAAACAGGCATAAATAATCAGGATTTACTTTCAACTCGCAAAGTCCTGCGATATTTAAAACCCATTTTAAAAAAGAAAAATATTGATATAAAGTTCATTTTAAGGGAAGTACGCAAGCTTAGAATAGTCGATTATGAAAATATATACGAAACTGGATCAGAAGACATAACTGACTCTTTTAAAGTTAGTGATACGTCCCAAAACGCTGATATACCTGAAAAAAAATTAACAAGTGCATCTGTAACACTTAATGTGGCAAATACGACTGAAGCTTCAAATTCTCAACAACATCACTATCATGCTAATCCAGCGGCGGAGGGTATAGACGACACGCAGTGCAGTAGCCCTCGTCTTCTCGGTGATGAAGTTTTGCTGCCACTGTCTGTAGAACATGAAGCTATACCAAATGAAATTCCTTCCCACAATCTATCTTCAGTGTTAGTTGATGATTATAAATCCATTTCTCCTTTAATTATAGGAAAAACTACTTCAACCCAGGTGGAGGGCAATATCGACGAAGATATATCAACTTTACACATTACAGGAAGCTACCTTGATGAGACAACCTTGGTTTCACTTGACGATGTGATAATTATACCATTTCAAACAAGCACACCCACGAAAACAGAACCTGAAACTCAGTTATTCAAAATTCCAAAGATAACAGTGTTATCTGATGTAACCATTAAACCACCACATACCTCCACTCCTCCCGAACTTATACCCGATGCATCTCCCCAAACACAAATCATGTCTGAAACAAGTATGCTCACTCTACAGCCAGGAAAAACAGAAGCTGTTAGTACTGCAACGACATCAAAAGCACTGACAGATAATGTGTTTGCCAAGCATTTATACCAACCCCGACCTTCTGGGAAGTCAAAACATGTCAAAAAAAGTCATTCAACTTTTCCTTCTTCTATATCAAGTCAAAAATGGCGAGATTATTATAAAGAAAAAGAAGAGGCTAAATTAGAAAAAGAAAGGATAAAACAAGAGAAAAAAGCTACCGCAAAACGCAAGAAAGAGGAATTAGAGAAAAAGAAACAAGAAACTCATAGAAGAAAGAAAAGGAAAATAAATATCCCAAAAAAAGAAACAAAGAAAGAGACAGAAGAAGAGAGAGAAGAAGTATTAGAAGTATATAAAACAAAGTTTAAAAAATACACAAATTACCTTGAATTAAAACAAAATTGTGCACAGTGCACTGAAATTTTAAATAGTGACACTGAAGACGAAGAGAACAAAAATGTAGGGTGTGATTTTTGTTCGAAGTGGTTCCATTTAAAGTGTAGCGATTTTGTGGGGCTCAGCTATGACATAGCTAAAGACATGCCATTCAAATGTAATACATGTATCATAGAAGAAGAATAA
- Protein Sequence
- MRIAIPMPFSKSEKKKSVKYRPEDLERALKEIRDDKKGIRETCRKYGIPRTTIQDRLAGRRHDVLQARGPEPYLGVEGEKKVVNWMLNIAKCGFPIKKQELLDTVQKIFKDLGKKTPFKNDRPGQTWYHNFLKRNPVISDRVAESINKARARVTEASIRFWFSELQSYLAEVGALEILDHPNRIYNADESGFCLCPKTGKVLGPKGYKNLYRINAGSEKDNLTVMLAFNASGQICPPLVVFPYLRPPRAVSESMPPDWCLGRSESGWMRGEVFFEYMANDFNNWLEGNNIKRPVLFLVDGHKSHMSYLLSEICDKLGIILYALPPNTTHMLQPADVSVFGPMKAYWRSVVRQYLNKPENIDRQVTKTTFCPLFKEIISNPQLPTNIINGFRKCGLYPFNPNAVDYTKCVRNTIMNLNRQQRVTVQQETGINNQDLLSTRKVLRYLKPILKKKNIDIKFILREVRKLRIVDYENIYETGSEDITDSFKVSDTSQNADIPEKKLTSASVTLNVANTTEASNSQQHHYHANPAAEGIDDTQCSSPRLLGDEVLLPLSVEHEAIPNEIPSHNLSSVLVDDYKSISPLIIGKTTSTQVEGNIDEDISTLHITGSYLDETTLVSLDDVIIIPFQTSTPTKTEPETQLFKIPKITVLSDVTIKPPHTSTPPELIPDASPQTQIMSETSMLTLQPGKTEAVSTATTSKALTDNVFAKHLYQPRPSGKSKHVKKSHSTFPSSISSQKWRDYYKEKEEAKLEKERIKQEKKATAKRKKEELEKKKQETHRRKKRKINIPKKETKKETEEEREEVLEVYKTKFKKYTNYLELKQNCAQCTEILNSDTEDEENKNVGCDFCSKWFHLKCSDFVGLSYDIAKDMPFKCNTCIIEEE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00933670; iTF_00933671; iTF_01248050; iTF_01217429;
- 90% Identity
- iTF_00933670; iTF_00933671; iTF_01217429;
- 80% Identity
- iTF_00933670; iTF_00933671;