Lbel023118.1
Basic Information
- Insect
- Lysandra bellargus
- Gene Symbol
- -
- Assembly
- GCA_905333045.1
- Location
- HG995342.1:6418173-6419140[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-10 7.7e-08 32.6 0.0 1 36 8 43 8 48 0.92
Sequence Information
- Coding Sequence
- ATGGCGCCTAAAAAGAATTATTCTCCTGAACAAATGGCTAATGCAATTAATGCCGTTAACAGTGGGGACACAATAGCAAAAGCCGCTGAAAAATTCGGAGTGCCTAGAATAACTCTATACAATAAGGTGACAGGTATAAGTCCTAAGGTCTGTTCCATGGGTCCAACTACATATCTCTCTAAAGAAGAAGAAGATTTATTAGAACAATGGGTCATTATGATGAGTGAGAATCATGTTCCTATTACAAAAGACGAATTGTTGGATAGCGTCCAAAAAATAATTACAGACAAACGTCAAAATACACCTTTCGTCGATAATCGCCCAGGTAAAAAATGGTACCAACTTTTTTTAAAACGACACCCAATTGTGGCTGAAAGAACTACCCAAAATTTAACTACCGCTCGGGACAATGTTACCGAGGATCAAATTAAAAAGTGGTTTGAAGAAGTAGGCGACTATTTGGAGAAAAAAGGGTTAAAATCTGCTCTGGAAGAACCTGAAAGAGTATTTAATACAGATGAAAGTGCCTTTTTTTTATCTCCCAAGCCAGGTAAAGTACTTGCGAAAAGAGGCGAAAAGCATGTTTACTGCTCTTCAGGAAACGAAAAGGACAATCTTACAGTCCTTGTTACTGGGAACGCAGCAGGTCAGTTAGCTCCACCAACGGTCGTATACAGTTACGAACGTATTCCGGCGGCAGTCGCGCATAAAATCCCAGAATTCCATTAG
- Protein Sequence
- MAPKKNYSPEQMANAINAVNSGDTIAKAAEKFGVPRITLYNKVTGISPKVCSMGPTTYLSKEEEDLLEQWVIMMSENHVPITKDELLDSVQKIITDKRQNTPFVDNRPGKKWYQLFLKRHPIVAERTTQNLTTARDNVTEDQIKKWFEEVGDYLEKKGLKSALEEPERVFNTDESAFFLSPKPGKVLAKRGEKHVYCSSGNEKDNLTVLVTGNAAGQLAPPTVVYSYERIPAAVAHKIPEFH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00403706;
- 90% Identity
- iTF_00403706; iTF_00821715; iTF_00821709;
- 80% Identity
- -