Basic Information

Gene Symbol
Kdm5_1
Assembly
GCA_905333045.1
Location
HG995320.1:10873736-10902116[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.2e-24 1.3e-21 77.5 0.0 2 89 101 184 100 184 0.93

Sequence Information

Coding Sequence
ATGGGAAAATGTGACGAAGCTAATGTCGAAGTTAATATGGGGGACTCGGCGTCCCCCATGAAACCTGATAATTTTACATTCACCGTCCCTCCGGAGGCCCCAGTGTTCGAGCCCACCGTCGAAGAGTTCCAGGACCCTCTGGCGTACATCAGCAAAATAAGACACATCGCTGAAAAATCGGGCATTTGCAAGATAAAACCCCCCGCACATTGGCAGCCACCGTTTGCTGTGGATGTTGACCGTTTGCGGTTTACTCCAAGGATACAGAGATTGAATGAACTGGAGGCAATTACAAGGGTGAAACTGAATTTCCTGGATCAAATAATAAAGTTTTGGGAGCTACAGGGATCGGTGTTAAAGATACCCACTGTCGAGAGGAAACCACTGGATTTGTACGCATTACACAAGCTCGTAAAGGAGGCTGGTGGATTCGAAGTATGTTCAGCGGAGCGGAAATGGTCGAAGATAGCGAGGCGCATGGGTCACCCCCAGGGAAAAGGAGTCGGCTCCATACTGAAGAGTCATTACGAGAGAATACTCTACCCGTATGATGTGTTCAAGAACAATGGTGTACTCACCGATAGTAAAGAAACAAAAATAGAGGTGAAAAGCGAACAGACCCCCGAGAAGGTGGGTCGGCGGTCGAGCAGCAAGCCGCCCGCGACGCCCTCGCCCGCCCGCCGCTACAAGAGCGCGGAGCCCGAGCCGGCTGAGGGGTCGCACACTGAGGGAGCTCTGCCCTCTGACACCAAGACCCCGATCAAGGAGGAGCCCGGGGAGACTCGTAGAAGTCCTAGAGAGAACAAATGGATGTCGTCGGCGGGAAGCTGCGGCGCGCGCGCCCGGGTGCTCCGCTCCACCAAACTCAGGGAACACCGCCTGAGCAACATGACAGTGTCCGTCACACCGGCACCGCCAGTTATCAGTCCCGATGACCCGCTGGCCAAGTACATGTGTCACGTGTGCGGGCGCGGCGACGTGGAGGAGCAGATGCTTCTGTGTGACGGCTGCGACGACTCCTATCATACATTCTGCTTGGTACCGCCGCTGGCTGACGTGCCCAAGGGAGACTGGAGATGCCCCGTGTGTCTTGCTGAGGAGGTATCTAAACCAACTGAAGCGTTTGGTTTCGAACAAGCGAGCCGCGAGTACACACTGCAACAATTTGGAGAGATGGCAGATCAATTCAAGTCAGATTATTTCAACATGCCTGTACATATGGTACCCACGTCAGCTGTTGAACGTGAGTTCTGGAGAGTAGTTTCTTCAATTGATGAAGATGTGACGGTCGAATATGGAGCTGATCTTCACTCGATGGACCATGGTTCAGGTTTTCCAACAAAGTCGAGTGCACACCTGTATCCCGGCGAGCAACAGTATGCCGAGTCCAGCTGGAATCTAAACAACCTGCCCGTGCTAGAGGGTTCCGTACTTGGACATATCAACGCTGACATATCTGGAATGAAGATACCATGGCTGTATGTTGGCATGTGCTTCGCTACATTCTGCTGGCACAACGAGGACCACTGGAGCTACTCTATCAACTATCTGCACTGGGGCGAACCGAAAACTTGGTATGGAGTCCCAAGCTCGAAGGCAGAACAATTCGAGGCCACAATGAAGGCTGAAGCTCCTGAGCTGTTCCAACTGCAGCCGGATCTACTACATCAATTGGTCACAATCATGAACCCGAATGTGTTGATGAAGGCCGGAGTTCCTGTTTACAGATGCGATCAAAATGCTGGAGAATTCGTTATTACTTTTCCCCGGGCGTACCACGCTGGGTTTAACCAAGGATACAACTTTGCTGAGGCTGTCAACTTTACACCAGCAGATTGGCTAAAAATGGGTCGCGAGTGCATATCTCACTACTCGACGCTGCGCCGCTACTGCGTTTTCTCGCACGACGAGCTCGTGTGCAAGATGGCGTTGGAGGCGGAGTCTCTCACGCTGACGATCGCGCTGGCGGCGTACCGCGACATGCGTACAATGCTGCACGACGAACGCAAGTTGCGGAAGGCGTTGTTGGATTGGGTGAGTGTATACGACATATCCCACTAA
Protein Sequence
MGKCDEANVEVNMGDSASPMKPDNFTFTVPPEAPVFEPTVEEFQDPLAYISKIRHIAEKSGICKIKPPAHWQPPFAVDVDRLRFTPRIQRLNELEAITRVKLNFLDQIIKFWELQGSVLKIPTVERKPLDLYALHKLVKEAGGFEVCSAERKWSKIARRMGHPQGKGVGSILKSHYERILYPYDVFKNNGVLTDSKETKIEVKSEQTPEKVGRRSSSKPPATPSPARRYKSAEPEPAEGSHTEGALPSDTKTPIKEEPGETRRSPRENKWMSSAGSCGARARVLRSTKLREHRLSNMTVSVTPAPPVISPDDPLAKYMCHVCGRGDVEEQMLLCDGCDDSYHTFCLVPPLADVPKGDWRCPVCLAEEVSKPTEAFGFEQASREYTLQQFGEMADQFKSDYFNMPVHMVPTSAVEREFWRVVSSIDEDVTVEYGADLHSMDHGSGFPTKSSAHLYPGEQQYAESSWNLNNLPVLEGSVLGHINADISGMKIPWLYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPSSKAEQFEATMKAEAPELFQLQPDLLHQLVTIMNPNVLMKAGVPVYRCDQNAGEFVITFPRAYHAGFNQGYNFAEAVNFTPADWLKMGRECISHYSTLRRYCVFSHDELVCKMALEAESLTLTIALAAYRDMRTMLHDERKLRKALLDWVSVYDISH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00406491;
90% Identity
iTF_00033603;
80% Identity
-