Lmon034841.1
Basic Information
- Insect
- Lymantria monacha
- Gene Symbol
- nfxl1
- Assembly
- GCA_905163515.1
- Location
- LR991105.1:22271122-22273593[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 2 4.2e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 17 0.01 2.2e+02 3.2 0.3 4 10 169 175 168 176 0.97 3 17 1e-07 0.0022 19.2 15.5 3 19 186 202 185 202 0.96 4 17 5.5e-08 0.0011 20.1 11.6 3 19 239 255 237 255 0.92 5 17 0.89 1.9e+04 -3.0 1.1 5 10 279 284 279 284 0.92 6 17 8.1e-10 1.7e-05 25.9 11.8 1 19 290 308 290 308 0.99 7 17 5.1e-06 0.11 13.8 19.3 3 19 345 361 337 361 0.86 8 17 2 4.2e+04 -5.3 2.2 5 10 384 389 384 389 0.88 9 17 4.1e-07 0.0086 17.3 17.0 1 18 395 412 395 413 0.97 10 17 4.5e-10 9.3e-06 26.7 14.0 1 19 422 440 422 440 0.99 11 17 0.0002 4.3 8.6 6.4 9 19 488 498 486 498 0.89 12 17 0.0048 1e+02 4.3 10.8 1 12 508 518 508 518 0.96 13 17 1.5 3.1e+04 -3.7 4.4 14 18 547 551 547 551 0.91 14 17 0.21 4.3e+03 -1.0 0.4 8 12 568 572 567 579 0.79 15 17 8.2e-06 0.17 13.1 5.6 1 11 588 598 588 599 0.97 16 17 0.00015 3.1 9.1 16.6 1 18 628 645 628 646 0.84 17 17 6.7e-06 0.14 13.4 11.0 1 18 687 705 687 706 0.89
Sequence Information
- Coding Sequence
- ATGGCACGGAGATATAGAGATGCAGCTGCAAAGTTGCAACAAAATGttcaaaaacatttaaaagaaaTGAAAGAACTTTCATCTTCCGAAGATGAAGATCCTTACGAAGCCAGTGTCCTCGATGGCATGTTCCAAAGTTACTGGAGAGGCGGCGGAGACCAGTCTATGTTGAACAGGACTAAGAATCTTCTAGAAGAAGCGATCAGCGGTCGTGCAGTGACATGCCTCATCTGTATAGCATCCATTAAAAGGGTAGATGCGATATGGACTTGTGATCATTGTTTTTCTTACTTTCACCTATCGTGTATACAAAAATGGGCAAACGATAGTATATTCCTACGAAGTGAAGAGAATCAAGGTCCTATAGCCGTAGTTAAACCAAAAAAGGTAGAATGGTGCTGCCCGAAATGTCGTCAATCGTATTCTAAAGAAGAAATACCCCGTAAATACAGATGCTTTTGTGGTAAAACTGATGATCCACAGTACCATCCATGGCTGATTCCCCATACATGTGGTGAAGTCTGTGGGAAGAGGTTATCAATCGGTAATAACtgtaatcataaatgtttattgttaTGCCACCCTGGACCTTGTCCACCATGTCCTCAGACTGTCAATGGAGTATGTTTTTGTGAGAAGGAACGCAAGAAGGTCAGGTGTAGTTTAGCAAAATGGTCATGTGGGCTAATATGTAAGAAAACACTATTGTGTAAAACacataaatgtgaaaatatatGCCATGATGGAGACTGCTCACCTTGTAGTTATACCAGCATCCAACCATGCCAGTGTGGCTCTGTAAAAGCTAAAAGACCATGCAATGATCTGTTCTGGAAGTGTGAAAAAATGTGTGGCAAACCATATTCATGTGGTTACCACAGATGTGATAAAATCTGTCATTCAGGGGACTGTGGGTCTTGTCCAAATTCAGGTATAATAACTTGTCCGTGTGGTGCAAATGAACGTTTTGTACAATGTCCAGACGTTATGGAAACATGCTTAGGAACTTGTGGCAAGAAACATGATGATTGTGAGCACAACTGCCCTGAAAAATGTCATAAAGGACAATGCCCACCTTGTCAGGTCTTAATACAGAAACAATGTCAATGCTCCACCCATACCAGGTCCCTGCCATGCAGTAAAGAGTTCAAATGTGAAACAAAATGTAGAGGGATCAGACCTTGCGGTAAACATAGTTGTGCCAGAAAATGCTGTAATGGTAACTGTCCACCATGTGAAAAAGTATGTGATAAACCTCTTCAATGTGGCAGACATAAATGCACTAACATCTGCCACCGTGGACCTTGCTACCCTTGTCCTAGAGAATCTAAAGTAACTTGTAGATGTAAGGCGACATTTGTGACAGTTCCTTGTGGCAGAGAAAGGCATACAAAACCTCCTAAATGCACTctgaaatgtaaaattaaatacaaatgtggCCATATCGAAGAAAATAAGCACTCTTGTCATTTCGGAGACTGTCCACCATGTAAAGCAGTTTGTGATAAAGAATATCCAAAGTGTGGACACCATTGTGAAGCTGTATGTCATGAATATGTTGCTGTGGTCTTTAAACAGGTTGAGAAGCCGGCTACACCATGGGAGGTGCAACCaccaaaaactaaaataatgacttTAGAATGTCCTCCATGCATTGTGCCCGTCCCTGTTGTTTGTTTTGGTGAACATGAGACTGATGATCAGCCTTGCCACTCTGCTGCTCGTAGACCTTGTGGTAGAGAATGTGGCCGTCCTCTAACATGTGGTAACCATAAATGCACTGTGCTCTGTCACCTCTACAGTCCAAATCCGGAGTATCCAAATATTCCCTCCTCTTGCAGACAATGCAACCTAGAATGTTTGTTTCCTAGACCAACCAAATGCTCTCATAAATGTCCTAAACGTGCCTGCCATCCTGGACAGTGTCCTCCTTGTGAGGTACTAGAAAGATTTGCTTGTCATTGTGGAGTAACTGAAATCTACTTGCGCTGCCGAGAATTATCAGTAGCTACAGAAGAAATGTTATCATGTAAGCAACAATGCCCTAAGAATTTAGAGTGTGGGCACCGCTGTCGTAATATTTGCCATTCTGGTACTTGTGGCAACCAGGTTTGTAATAAGAAGACTAAGACTCACTGTCCATGTGGTAGTATTAAGAAAGATGCTCCATGCAATGCCATTCGTAGCGGAGAATTCAAAATACATTGTGACGATGCATGTGAAGCTAAAAAAATAGCAGCTAAATTAGAGAGTGATAAAGAAAAGCAAAGATTAAAAGCTTTAGAAGAGGAAAAGAATAAAAGAGAATTAGCAGAATACGAGTGGAAATTGAGTGgtaaaaagaagaaatataagGAAAAGAAAGTAGTTGTTAGCACAGATAACAGACCGTTTTTGCAAAAGTATTGGATGCCAATATTGTCTGTACTTGTAGCTTTAATagcaacattttattatatattttatttgtga
- Protein Sequence
- MARRYRDAAAKLQQNVQKHLKEMKELSSSEDEDPYEASVLDGMFQSYWRGGGDQSMLNRTKNLLEEAISGRAVTCLICIASIKRVDAIWTCDHCFSYFHLSCIQKWANDSIFLRSEENQGPIAVVKPKKVEWCCPKCRQSYSKEEIPRKYRCFCGKTDDPQYHPWLIPHTCGEVCGKRLSIGNNCNHKCLLLCHPGPCPPCPQTVNGVCFCEKERKKVRCSLAKWSCGLICKKTLLCKTHKCENICHDGDCSPCSYTSIQPCQCGSVKAKRPCNDLFWKCEKMCGKPYSCGYHRCDKICHSGDCGSCPNSGIITCPCGANERFVQCPDVMETCLGTCGKKHDDCEHNCPEKCHKGQCPPCQVLIQKQCQCSTHTRSLPCSKEFKCETKCRGIRPCGKHSCARKCCNGNCPPCEKVCDKPLQCGRHKCTNICHRGPCYPCPRESKVTCRCKATFVTVPCGRERHTKPPKCTLKCKIKYKCGHIEENKHSCHFGDCPPCKAVCDKEYPKCGHHCEAVCHEYVAVVFKQVEKPATPWEVQPPKTKIMTLECPPCIVPVPVVCFGEHETDDQPCHSAARRPCGRECGRPLTCGNHKCTVLCHLYSPNPEYPNIPSSCRQCNLECLFPRPTKCSHKCPKRACHPGQCPPCEVLERFACHCGVTEIYLRCRELSVATEEMLSCKQQCPKNLECGHRCRNICHSGTCGNQVCNKKTKTHCPCGSIKKDAPCNAIRSGEFKIHCDDACEAKKIAAKLESDKEKQRLKALEEEKNKRELAEYEWKLSGKKKKYKEKKVVVSTDNRPFLQKYWMPILSVLVALIATFYYIFYL*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00932106;
- 90% Identity
- iTF_00932106;
- 80% Identity
- -