Lmon002229.2
Basic Information
- Insect
- Lymantria monacha
- Gene Symbol
- GATA-B
- Assembly
- GCA_905163515.1
- Location
- LR991082.1:233678-240047[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-15 5.5e-12 46.2 6.8 1 34 11 43 11 45 0.97 2 2 1.1e-18 5.1e-15 56.0 7.6 1 34 79 111 79 113 0.97
Sequence Information
- Coding Sequence
- ATGGCCGAGTTGATCACTGGGGGGCGCGAGTGCGTCAACTGCGGCGCCGTGCACACGCCGCTCTGGCGCCGCGACTGCACTGGACACTACCTGTGCAACGCGTGCGGCCTCTACAACAAGATGAACGGCATGAACCGGCCGCTCAAGCAGCCGCGGCGGCTGGTACGTCAGCGCCTCGCGCCGCCCGCCCTGTCCGCGCCGCACGACATGGGCAGCAAGCGGCCGGGCATGGCGTGCACCAACTGCCAGACGACGACGACGTCGCTGTGGCGGCGCAACGCCCACGGTGAGACCGTATGCAACGCGTGCGGACTGTACTACAAGCTGCACAACATCAACCGACCGCTCGCCATGAAGAAGGACTCCATACAGACGCGCAAGCGGAAACCCAAGGACAGAATAAAGACGGATCGCAATCTCAAGAACGCAGTGCAGCGCAGCATCAGCACCGGCGTCAAGTCGGACAGCATGCTGGAGGCGGGCGCCGCGACGCGCGCACCGCTCGCGCTCAGCTACTACGTGCAGCACGCGCTCAAGATGGAGGAGCCACCGCCGGCGCACGGAGCGCCTGCGCCCGCACACGCGCCCTCGCCCGCGCACGCGCACGCTCACGCGCACGCGCATGCACACGCTCACTCGCACGCGCTCGCGCACACCTACGACGACGAGCGGCTCGAGCGGCCGACGGTCGTGTCCATGGGCAGCTGA
- Protein Sequence
- MAELITGGRECVNCGAVHTPLWRRDCTGHYLCNACGLYNKMNGMNRPLKQPRRLVRQRLAPPALSAPHDMGSKRPGMACTNCQTTTTSLWRRNAHGETVCNACGLYYKLHNINRPLAMKKDSIQTRKRKPKDRIKTDRNLKNAVQRSISTGVKSDSMLEAGAATRAPLALSYYVQHALKMEEPPPAHGAPAPAHAPSPAHAHAHAHAHAHAHSHALAHTYDDERLERPTVVSMGS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00932090;
- 90% Identity
- iTF_00932090;
- 80% Identity
- -