Basic Information

Gene Symbol
ZNF717
Assembly
GCA_905163515.1
Location
LR991108.1:13334060-13347811[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 0.0016 0.17 13.6 1.3 1 23 179 201 179 201 0.98
2 12 1.5 1.7e+02 4.2 3.8 1 22 208 229 208 231 0.88
3 12 0.38 41 6.1 5.8 1 23 235 257 235 257 0.97
4 12 0.0092 1 11.1 1.5 1 23 262 285 262 285 0.92
5 12 0.0031 0.34 12.6 1.5 1 23 289 312 289 312 0.97
6 12 0.24 26 6.7 0.5 1 19 324 342 324 344 0.91
7 12 0.0078 0.85 11.4 0.4 3 23 358 378 356 378 0.97
8 12 0.00027 0.03 15.9 0.3 2 23 384 406 383 406 0.96
9 12 5.6e-05 0.0061 18.1 0.3 2 23 425 446 424 446 0.97
10 12 1.4e-05 0.0015 20.0 0.9 1 23 452 474 452 474 0.99
11 12 3.6e-05 0.0039 18.7 3.2 1 23 480 502 480 502 0.93
12 12 6.9e-06 0.00075 21.0 2.6 1 23 508 531 508 531 0.98

Sequence Information

Coding Sequence
ATGGGAATTTTAGTAAAGTTTGTACAGATTCGGAACGTGTTTTATAGTATCTTGACTGAAGAGCTTACACAAAAACAAATAGCATCTTTCTTCCTCACCATGTCCCCCGTCCACTCCTTTTCCATTTCATCAGTTGATCATTTCAATACGGATGAAAATCTTATATCTGTAAAAGAAGAAGATAAAAAACCAATTTACAGTGATGACGATACATTGGAGAGTAAAGTTAAAACAGAAATTGTCATTTCAACTTTAGAAAATAGTCAAGACACATTTGAAACGGTCACAGAGACAATAGAGTGTTCCGAATTTGAATTAGACAATGTTGAGAATAGAGAATATTCTGAATTTGAAATTGAGACATTGGAGACCGTGGATATTGAGACAATGGAAATAGTTGATTTAGAGACTAATATTGCTGAACAGGATACGGAATTGGATAATCAGGATGTGGAAGTGATATTTCTGACTAAAGATCAGCAACTTGAAGAGGTTCTGGCCAGAAAGGATTCGGTTAACTTTCAAAATTCTTATTACAAGTGTGATTTATGTTACAAAGGTTTTATGACTGATGCAACGTTCAAAAATCACATGGTGAGACATGATCCGagcTCAGGACCACACGTTTGTGAGATTTGCAACACGAGATGGCGTACTAGGCGTACATTAAAATCCCACTGTACAACAGCCCACGAGAGAAAGTACATTTGCAAAATGTGCAATCACGTCTCAAGGTCGTGCCACCAGGCCAAGGAGCATATAAAATGGCACCAAGGTCACTCTTATATTTGCAAAATATGTGGAGCCACCTTCTCCAAATCCACCAGCCATCTTACACACGTAAGGTTGCAGCATCCATCGGAATATTGCTGTGAATTCTGCGGGGACAGTTTTGTTTCACAAAACGGTCTTAATATTCATAAGAAGAAGGCTCATACGCGAAATGAGGAATCACAAACAAAATCTCAGTTCTTGTGTTCTGTATGTCAAACAAAGTTCAAGAATATTGAAGCGTTCACTTATCATAATGATATCACGGCGGACGGCACATGCGATCCAAGTTTAAGCCATTGCCCTCAATGTGGTGATTATTTTGAGAGTCAGGAGTTACTGTTGGAGCATCTGAAGATTCACAAAGAGGAGCCGGTGAGGTGTGACGagTGTAACAGAACGTTTGCACAAGAGCGTTCCTTCGCAATTCACTATCAGAGAGTTCACTTAGGATTCAAGAAGAGAAATAAGCAAGTGGGTGCCAAGAGTAAGCCTGAGGTTGTCTGTGAAGTCTGCGGCAAGAGATGTAATTCGAACGCAGCGTTGGTCTACCATCAGAGAATACATACAGGTGAGAAGCCGTTCCAATGCTTGGAGTGTCCGAAGAGTTTCAGCGTATACCAAAGACTTCAGATACATTTAAGAACTCATACCGGGGAGAGGCCGTACAATTGCTCGCACTGCCCGAAGGCATTCAAACATAAGGCAGCTTTGAACAGACATGACAGAGTACATACAGGCGTGAAACCCTATCAATGTCAGTATTGTTTCAAATCATTCTCACAATCGAATTCAATGAAACTGCACGTACGTACTGTTCATTTAAGAATGCCTGCGCcttataagaagaagaaggtgaTTAAAACTGATGAAGCTTAA
Protein Sequence
MGILVKFVQIRNVFYSILTEELTQKQIASFFLTMSPVHSFSISSVDHFNTDENLISVKEEDKKPIYSDDDTLESKVKTEIVISTLENSQDTFETVTETIECSEFELDNVENREYSEFEIETLETVDIETMEIVDLETNIAEQDTELDNQDVEVIFLTKDQQLEEVLARKDSVNFQNSYYKCDLCYKGFMTDATFKNHMVRHDPSSGPHVCEICNTRWRTRRTLKSHCTTAHERKYICKMCNHVSRSCHQAKEHIKWHQGHSYICKICGATFSKSTSHLTHVRLQHPSEYCCEFCGDSFVSQNGLNIHKKKAHTRNEESQTKSQFLCSVCQTKFKNIEAFTYHNDITADGTCDPSLSHCPQCGDYFESQELLLEHLKIHKEEPVRCDECNRTFAQERSFAIHYQRVHLGFKKRNKQVGAKSKPEVVCEVCGKRCNSNAALVYHQRIHTGEKPFQCLECPKSFSVYQRLQIHLRTHTGERPYNCSHCPKAFKHKAALNRHDRVHTGVKPYQCQYCFKSFSQSNSMKLHVRTVHLRMPAPYKKKKVIKTDEA*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00931810;
90% Identity
iTF_00931810;
80% Identity
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