Basic Information

Insect: Lymantria monacha
Gene Symbol: -
Assembly: GCA_905163515.1
Location: LR991083.1:20117404-20134007[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0047 0.51 12.1 0.2 2 23 217 239 216 239 0.95

2 12 2.7 2.9e+02 3.4 0.3 6 23 249 266 247 266 0.92

3 12 0.021 2.3 10.0 3.3 1 19 299 317 299 322 0.91

4 12 5.9 6.4e+02 2.3 0.4 6 23 332 349 330 349 0.94

5 12 0.0015 0.16 13.6 0.3 3 23 357 377 355 377 0.96

6 12 6e-05 0.0065 18.0 2.3 1 23 385 407 385 407 0.97

7 12 0.00096 0.1 14.2 2.0 1 23 416 439 416 439 0.97

8 12 0.00027 0.029 16.0 0.2 1 23 445 467 445 467 0.97

9 12 1.3e-06 0.00015 23.2 2.7 1 23 473 495 473 495 0.98

10 12 0.0013 0.15 13.8 1.0 1 23 500 522 500 522 0.98

11 12 3.6e-06 0.00039 21.9 4.2 1 23 528 550 528 550 0.97

12 12 0.00016 0.018 16.6 2.9 2 23 557 579 556 579 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0047	0.51	12.1	0.2	2	23	217	239	216	239	0.95
2	12	2.7	2.9e+02	3.4	0.3	6	23	249	266	247	266	0.92
3	12	0.021	2.3	10.0	3.3	1	19	299	317	299	322	0.91
4	12	5.9	6.4e+02	2.3	0.4	6	23	332	349	330	349	0.94
5	12	0.0015	0.16	13.6	0.3	3	23	357	377	355	377	0.96
6	12	6e-05	0.0065	18.0	2.3	1	23	385	407	385	407	0.97
7	12	0.00096	0.1	14.2	2.0	1	23	416	439	416	439	0.97
8	12	0.00027	0.029	16.0	0.2	1	23	445	467	445	467	0.97
9	12	1.3e-06	0.00015	23.2	2.7	1	23	473	495	473	495	0.98
10	12	0.0013	0.15	13.8	1.0	1	23	500	522	500	522	0.98
11	12	3.6e-06	0.00039	21.9	4.2	1	23	528	550	528	550	0.97
12	12	0.00016	0.018	16.6	2.9	2	23	557	579	556	579	0.95

Sequence Information

Coding Sequence: ATGGCTATGAGTGTGAAAGACCTGTGTCGATTGTGTGCAAAGAAAGATGAGTTTTCAAAGGATTTATTAGatgaaagcaataaaaatgtattaaaattaattcaggACTTTATACAGATCATCGtatatgataatgataatttgcCAACGAAAATATGTTTGGATTGTGAAGAAAAAATGGTTTCATTTCAACTCTTTGTACTTGAATGTTATAAAGTTCAAGATGCACTAAAGAaaatgtatgaagaaaattttgaTTCTCTTGATGTAAAGCTTGAAAAACTTCCACTAGATTATGGAGTGCCAATAAAGGCAGAGGTCAAAGATGAAGATGTAACTGCAGAAGATATTGTTAGTGCACTAAATAATGAAGCAACTTTATCAGTGATTGATGTTTTTCCACAAAGtagtaataatgatgatgtggaTATTCACAATGATGATCTCGACATACAAAtgggcgatgatgatgatgatgatgacgacgacgatgatgatgacgaatttcTCGATAAAATAGCCTTAGCAGCTTTAAAGCCAGTTAAAATGAAGAGGATTAGACGAAAGGAAATAACACAAGAAGAGGCTAAGCAGTTTAACGAAGTTCTTAAGAAACCTAATTTAAAAGTTAAGGATTTTGTAAAATTACAATGCAATTTTTGTGAAGAGAAAATAAAGACATGGAGTGGTTTACGTATACATTATGCAAAAGAGCATAAAAGCAAACCATTTGTATTCTGTTTGTGTGGATTTGCAGTAAGATCAAAAAGTGTTCTTTATAAACATGTATCAGATCACAAATTagagagtaaaaaaataaagaagaattCAGAAACAGATGATGAAAAGCAAGATGTAAAATATTCAAGCCTTAATGTAAAAGATTTTATAAGATTCGTCTGCCCCAAATGTGAATTAGAGTGCTCAAGTTGGTATAGTCTCAAATCCCATTGTGAGTCAGAACACGAAATCATGCCTGTTGTTTCATGTAGCTGTGGAATAACTTTGAAATCGAAATCCGTTATGTATAAACATGTTCAGGACCATAGGAATCCCAATGTATTGGcTTGTGATAAGTGTCCACGTATAACAAAGACTTTAGCTGCCTTGAATAAACACAAGATGAGACATATACCAAAATCAGAGAGAAAATTCTGTTGTGCGTCATGCGACAAAATATTCACATCAAAAGATGCTTTGAAATCTCATGAAAGATCTCATATACCTATAGAGGAGCGCAAAATATATCACTGTGAGATGTGCAATATGAAGTTTACAACGCGTTCTTCGGCAGCGTCCCACAAGCGTGTGGTGCACGAGAAGATAAAGGGTTATGTGTGTGACTTGTGCGGGTATGCGTGCGGTACCAACGGGGAGTTGAGGCAACATCGCGCGATACACAGTGACGACAAACCTTTCGTCTGCAGGAAGTGTTCTAAACCATTTAAAACATATTCGAATTTGAAAACGCATATGGATACTCACGAGGAGACATCTTACGAGTGCTACATCTGTAGGCGCATATTGAACAGTCGTCGTACGTTACGGAAACATTTACTAGTACACGAAGATAAATGTAGACATGTatgttcatattgtaataaggCGTTCAAAAGAAGACAAACTTTGAAGGTACACATGTATACGCACACTGGTGATAAGCCGCTAACATGCAAATGGTGCGACGAGCGCTTCTCATACGCATCGACGCTACGCTCGCATCGGCTGCGGTGCCATCCCGACAAGTTGGCTGCCCACCATCATTACCCTTATACGCATGACACTATGCACGAGGATTATATTAAGAGTGACGTCGCAGCTGTAAACGTACCTGTAGCAAAGAATGAAGTAGAAGCTAtgtaa
Protein Sequence: MAMSVKDLCRLCAKKDEFSKDLLDESNKNVLKLIQDFIQIIVYDNDNLPTKICLDCEEKMVSFQLFVLECYKVQDALKKMYEENFDSLDVKLEKLPLDYGVPIKAEVKDEDVTAEDIVSALNNEATLSVIDVFPQSSNNDDVDIHNDDLDIQMGDDDDDDDDDDDDDEFLDKIALAALKPVKMKRIRRKEITQEEAKQFNEVLKKPNLKVKDFVKLQCNFCEEKIKTWSGLRIHYAKEHKSKPFVFCLCGFAVRSKSVLYKHVSDHKLESKKIKKNSETDDEKQDVKYSSLNVKDFIRFVCPKCELECSSWYSLKSHCESEHEIMPVVSCSCGITLKSKSVMYKHVQDHRNPNVLACDKCPRITKTLAALNKHKMRHIPKSERKFCCASCDKIFTSKDALKSHERSHIPIEERKIYHCEMCNMKFTTRSSAASHKRVVHEKIKGYVCDLCGYACGTNGELRQHRAIHSDDKPFVCRKCSKPFKTYSNLKTHMDTHEETSYECYICRRILNSRRTLRKHLLVHEDKCRHVCSYCNKAFKRRQTLKVHMYTHTGDKPLTCKWCDERFSYASTLRSHRLRCHPDKLAAHHHYPYTHDTMHEDYIKSDVAAVNVPVAKNEVEAM*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00707233;
90% Identity: -
80% Identity: -