Basic Information

Insect: Lymantria monacha
Gene Symbol: prg
Assembly: GCA_905163515.1
Location: LR991082.1:26379832-26381641[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.068 7.4 8.4 2.0 1 23 174 197 174 197 0.90

2 10 2.7 2.9e+02 3.4 1.7 1 22 203 224 203 226 0.80

3 10 3.8e-06 0.00041 21.8 3.6 1 23 232 254 232 254 0.96

4 10 5e-08 5.5e-06 27.7 1.9 1 23 260 282 260 282 0.99

5 10 1.7e-05 0.0019 19.7 0.2 1 23 288 310 288 310 0.97

6 10 0.00022 0.024 16.3 0.7 1 23 316 338 316 338 0.97

7 10 0.00065 0.071 14.8 1.1 2 23 430 452 429 452 0.94

8 10 0.00014 0.016 16.8 1.7 1 23 458 480 458 480 0.94

9 10 0.00013 0.014 17.0 3.2 1 23 486 508 486 508 0.97

10 10 0.0012 0.13 13.9 0.1 3 23 517 537 509 537 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.068	7.4	8.4	2.0	1	23	174	197	174	197	0.90
2	10	2.7	2.9e+02	3.4	1.7	1	22	203	224	203	226	0.80
3	10	3.8e-06	0.00041	21.8	3.6	1	23	232	254	232	254	0.96
4	10	5e-08	5.5e-06	27.7	1.9	1	23	260	282	260	282	0.99
5	10	1.7e-05	0.0019	19.7	0.2	1	23	288	310	288	310	0.97
6	10	0.00022	0.024	16.3	0.7	1	23	316	338	316	338	0.97
7	10	0.00065	0.071	14.8	1.1	2	23	430	452	429	452	0.94
8	10	0.00014	0.016	16.8	1.7	1	23	458	480	458	480	0.94
9	10	0.00013	0.014	17.0	3.2	1	23	486	508	486	508	0.97
10	10	0.0012	0.13	13.9	0.1	3	23	517	537	509	537	0.91

Sequence Information

Coding Sequence: atggaagaTTCCTACATCATCGCTAATTTCCACATTCTATGTAGACTATGTCTGAACAAAAGTACATTTAGTACGTCTATATTTTCTGCTACACCTGACGATGAAACAAACGTCTCTTTAACCTCCAAAATTACGGATTGTTTCGATTTACAGATTGACCCTAACGATGGCTTCCCTGGGCGTATATGCTTCAGATGTTTGTTCAAATTGGAAAAGTATTCAAAATTCAAACAACAATGCTTACAAAATGAAACCAAGTTGAGACAAATTATCAACCGTTTAAATGAAAGTAACTCAAATTCATCAGAACTTAATGATTACAACTACAGTCAGGATGTGAAACAACCAAAGCATGAAGACTATATTGTTGAAGATAGTGTTGTTATGGTTGTAGATCCAAGCCTTGATTATGATTCATCAGAAGAATCAGAGAACATGGAACCTGTGGAACAAGAATCCACTGAAAGGGACAACACTCCAGATGGTGAACCAATGGCAGAATCGTattttagaaatgtatttatgTGTCAATATTGTGATCAAGCTTTTATCTCGCAAGAGAAGTGTAAAGAACATGAGCTTAGTTCTCATGATCCTAATATACCTTATAAATGCTTTGAGTGTAGTGTGGTGTTTGCTGAGCGTAATCAATGTGTACAACATAGTAAACTAGTACATGGTAATGATAAACCTTATCACTGCCCTGAATGTGATAAATGTTTTGGACGGCGATCAGATTTACGGAAGCATTCAATTGTACATACTGGCATAAGGCCATATCAATGTCCATACTGTTTGAAAAGTTTCTCACGGAATACTAACTTAAGTAAACATCTTCGTATTCATGCTGGTCATAAACCTCATGTGTGTCCACTTTGCCCAAGAAGTTTCGTAGCAAAGGGAGATATGCAGAGGCATATGTTAGTGCATTCAGGAATGAAGCCTTATGCTTGCAGGAAATGCCCTCTATCATTTGGCAGAAGAGATAAACTAATAAAACATGAAATGAAACATGGCCCCATTAGTCCTGAGAAGACAGAATATGGTAATGAAAATGATGCACACAACATGGTTGTTAATGTTAATCCTTACAGCAATCTTATTACTTCACCTACCCAACTCCATCCAGATTCATCCAATGCTGAATTTGATTTGCCTAGAGTGCCAGACCACATATCTGGCGAGAGCAGTTTCATGAAAGTACAGaagaaaactgtaaataaaCCAATGCAAAATTCACCACCAAAACAAAAACtggttaacaataaaaatagacctaaaaatattaaatgtcacCAATGTCCTAAAAGATTTGGATCGCTGGACACTTATAAAACTCATGTATCTATAGCTCACATGAGTTCAAGAATATTTCAATGCAAAATTTGTTTCAAAAAGTTTCCTAGAAAAAGGGAATTGGACCGTCATTCTGCACTTCATTCTGGCATGAAACCGTTTTCATGTAGTCAATGTGATAAGAAATTCACCAAAAAGGACAAGCTTGATAAACATGAACAAAATCATGAGTGTGAGGTTGTGAACATGCCCTGCATTGAATGTGGCGTAAATTTTGAGAAAAAATCTGATTTAGTAGCACACATAAAGTCACATTTCACAGATCATTTTGATGAGAAAATGTCTGGtggtattgaaattaaaaaagaagatgATTCTGAATTTGTTTTAGATGAGAATTTTTATGATTTAGAAACTTGA
Protein Sequence: MEDSYIIANFHILCRLCLNKSTFSTSIFSATPDDETNVSLTSKITDCFDLQIDPNDGFPGRICFRCLFKLEKYSKFKQQCLQNETKLRQIINRLNESNSNSSELNDYNYSQDVKQPKHEDYIVEDSVVMVVDPSLDYDSSEESENMEPVEQESTERDNTPDGEPMAESYFRNVFMCQYCDQAFISQEKCKEHELSSHDPNIPYKCFECSVVFAERNQCVQHSKLVHGNDKPYHCPECDKCFGRRSDLRKHSIVHTGIRPYQCPYCLKSFSRNTNLSKHLRIHAGHKPHVCPLCPRSFVAKGDMQRHMLVHSGMKPYACRKCPLSFGRRDKLIKHEMKHGPISPEKTEYGNENDAHNMVVNVNPYSNLITSPTQLHPDSSNAEFDLPRVPDHISGESSFMKVQKKTVNKPMQNSPPKQKLVNNKNRPKNIKCHQCPKRFGSLDTYKTHVSIAHMSSRIFQCKICFKKFPRKRELDRHSALHSGMKPFSCSQCDKKFTKKDKLDKHEQNHECEVVNMPCIECGVNFEKKSDLVAHIKSHFTDHFDEKMSGGIEIKKEDDSEFVLDENFYDLET*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00185530;
90% Identity: iTF_00931776;
80% Identity: -