Basic Information

Insect: Lymantria monacha
Gene Symbol: -
Assembly: GCA_905163515.1
Location: LR991105.1:15605406-15609135[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.038 4.2 9.2 0.1 5 23 349 367 348 367 0.96

2 12 0.097 11 7.9 0.3 3 23 375 395 373 395 0.91

3 12 0.4 44 6.0 0.3 2 23 403 424 402 424 0.93

4 12 6.8e-07 7.4e-05 24.1 0.7 2 23 430 451 430 451 0.98

5 12 0.0032 0.35 12.6 4.3 1 23 457 479 457 479 0.98

6 12 0.0093 1 11.1 0.8 1 20 483 502 483 504 0.92

7 12 0.00022 0.024 16.2 0.2 1 23 537 560 537 560 0.95

8 12 0.00049 0.054 15.1 0.1 3 23 569 589 567 589 0.97

9 12 3.1e-05 0.0034 18.9 0.4 1 23 600 622 600 622 0.98

10 12 8.4e-05 0.0092 17.6 4.5 1 23 628 650 628 650 0.98

11 12 0.0031 0.34 12.6 0.3 3 23 658 678 656 678 0.98

12 12 2.2e-05 0.0024 19.4 0.8 1 23 684 707 684 707 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.038	4.2	9.2	0.1	5	23	349	367	348	367	0.96
2	12	0.097	11	7.9	0.3	3	23	375	395	373	395	0.91
3	12	0.4	44	6.0	0.3	2	23	403	424	402	424	0.93
4	12	6.8e-07	7.4e-05	24.1	0.7	2	23	430	451	430	451	0.98
5	12	0.0032	0.35	12.6	4.3	1	23	457	479	457	479	0.98
6	12	0.0093	1	11.1	0.8	1	20	483	502	483	504	0.92
7	12	0.00022	0.024	16.2	0.2	1	23	537	560	537	560	0.95
8	12	0.00049	0.054	15.1	0.1	3	23	569	589	567	589	0.97
9	12	3.1e-05	0.0034	18.9	0.4	1	23	600	622	600	622	0.98
10	12	8.4e-05	0.0092	17.6	4.5	1	23	628	650	628	650	0.98
11	12	0.0031	0.34	12.6	0.3	3	23	658	678	656	678	0.98
12	12	2.2e-05	0.0024	19.4	0.8	1	23	684	707	684	707	0.96

Sequence Information

Coding Sequence: ATGGATACGTGGTCCGATCTTTGTCGGAGCTGTTTATCTGCCAATTGCCAAGTGTCATTGTTAGATACAGAGCAAAATGTTAATGAAACGTTTCGGGAGATAACTACTATTCAGGTAAAAGAGGATGATGGTTTACCCCAGAAGCTATGTAATGATTGTTACAGTGTCATGATGTCAGCTCATCAGTTCAGGACgcagtgtataaaaatggatAAAGATTTAAAGTTGCAACTTAGCAGCCTAATGAATCAAGAACAGGCTGATGATAATATCAATGAATCTATTATCCATTTTAGTTCAGATTTAtgtgaagatgatgatatagGAAATGATCCTGAAAAACAATTAGAAGCTATTATTAAACAGGAACCTATAGACAGTGATGATGATTGCTATTATGTATTAGTCATAGATGATCCAAAAGATAAAAATCTAAAGTCTGATGAAGAAACTGAAAACACAATACCTATTTCTGACATCAAAGTTGAAAATGAACAAACAATTACACATAAGCCAGTTGATACAATGTTTGAAGATACAATTGATGCATTCTTAATGTCGAATACAAAAGTGTCTGCAAATGTACCAGCTACTATTCTTGAAAATGAAGAAGAAAGCCAAGATAATGAGGAGCTAGAAGGTGTTATGAACATTGATGAAACACAAGAGACTACTAATGAACATCAAACATTAGAACAAATTGTCAATTCACAAGAAACTCAGTTAATTGAGACAATTTCTACTGATGCTATCAAAAATCtacctaataaaaatataattaaaatactgaCAACTGCAGACTCTAATGGTACTATTCTACTAAAGGGTGCAGATGGTGGTATCCAATACCTAACAGATACACAACTAGTGACGACTGAAGAGGAAGATGATGATGGCATGTCACAAGAAGTTATACTTTGTGAAGGTGATGACGCCTCTCAATTTCAAATTCTGAAATATGATGGTTCAGAATTAGTGATAGAATATGCAGACGATGGCAATATAGCTACTGTATTACAGCAAGAAGATGGAACATTCTTGTGCGATTGTGGTGAACAATTTGAGGATTTAGCTGACTATGAAAAACATCAATATAAACATAATCCTGCTGGTGAACACTTGTGTAATTTATGTGGCAAAGGTTTTGAATCCGACGAAATTTTAACAGGACATATGTTGCTTCACAGTAGCACAGGACTATTACTTAATTGTCCATTTTGCAATCAGATTATAAGAAGAAATGCTTTGACGCAACATATTAAATACGgccataataatattaaacctCGTTGTAATATTTGTTTGAAAACTTTTGCTAATCCAAATAATCTAAAAAGACATATGATGATTCATAGCGGTATTAGAGAGTTTGAGTGTGATATATGTTTTAAACGTTTCCATCAGAAAATAACAATGCAAACGCATAGACTAACACATATGCAACCGCATGCATGCAATCAATGTGAACAATCATTTCAAAGCAAAACCGCTCTAACATCTCATAAAGAATCAGACGAGTGTACTAAATCAAAAGTCATTAAAGTTAAAGAAGAATTAATGAAAACTGTAAAACAAGAAATAACAACAAATCTCGGTAAACTTTTAGGATATGCATGTTCGTTATGCAAAAAGATGTTTTCAGTGGAGTCCGCTTTGGAACAACATGTTGAAAGTACTCATATAGTTGATCCAGCGGAATTGTTTTGTTCCGAGTGTGGTGAAGTCTTACCTAGTAAGAAAGACATGCAAGCTCATATTTTAACacataagaattttaaaaacaagAATGCTAAACGTTTTGAATGCAGTATTTGTGGTAAAGGTTGTTCAAGTCAAGCAATGTTGTTAATGCATGAACGTGTTCACACAAATGAAAGACCTTTCCCTTGTCAATTATGTTCGTTACGGTTTAAAACCAAAACTCATTTACGAACACATCAATTGACTCACACACGTGAAAAAAAGTTTGGTTGTTCAGTTTGTATGAAATTCTTTGCCCTAAAGGGTAATTTAGTTGTTCATTTAAGAACACATACCGGTGAAAGGCCATATGTTTGCTCTTTGTGCGGTGAAGCGTTTATAGAttctaaatatttgaaaaaacatAAACTAAAGAAGCACGCCATAGACAATGTTCCGTGGAATCAATACTGA
Protein Sequence: MDTWSDLCRSCLSANCQVSLLDTEQNVNETFREITTIQVKEDDGLPQKLCNDCYSVMMSAHQFRTQCIKMDKDLKLQLSSLMNQEQADDNINESIIHFSSDLCEDDDIGNDPEKQLEAIIKQEPIDSDDDCYYVLVIDDPKDKNLKSDEETENTIPISDIKVENEQTITHKPVDTMFEDTIDAFLMSNTKVSANVPATILENEEESQDNEELEGVMNIDETQETTNEHQTLEQIVNSQETQLIETISTDAIKNLPNKNIIKILTTADSNGTILLKGADGGIQYLTDTQLVTTEEEDDDGMSQEVILCEGDDASQFQILKYDGSELVIEYADDGNIATVLQQEDGTFLCDCGEQFEDLADYEKHQYKHNPAGEHLCNLCGKGFESDEILTGHMLLHSSTGLLLNCPFCNQIIRRNALTQHIKYGHNNIKPRCNICLKTFANPNNLKRHMMIHSGIREFECDICFKRFHQKITMQTHRLTHMQPHACNQCEQSFQSKTALTSHKESDECTKSKVIKVKEELMKTVKQEITTNLGKLLGYACSLCKKMFSVESALEQHVESTHIVDPAELFCSECGEVLPSKKDMQAHILTHKNFKNKNAKRFECSICGKGCSSQAMLLMHERVHTNERPFPCQLCSLRFKTKTHLRTHQLTHTREKKFGCSVCMKFFALKGNLVVHLRTHTGERPYVCSLCGEAFIDSKYLKKHKLKKHAIDNVPWNQY*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01198026;
90% Identity: iTF_00931764;
80% Identity: -