Basic Information

Insect: Lymantria monacha
Gene Symbol: -
Assembly: GCA_905163515.1
Location: LR991108.1:15696900-15704271[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 9.7e-07 0.00011 23.7 4.2 1 23 307 329 307 329 0.99

2 14 1.4e-06 0.00016 23.1 0.7 1 23 335 357 335 357 0.99

3 14 4.6e-05 0.005 18.4 2.5 1 23 363 385 363 385 0.93

4 14 9.2e-05 0.01 17.4 5.7 1 23 391 413 391 413 0.98

5 14 2.7e-05 0.003 19.1 8.0 1 23 419 441 419 441 0.99

6 14 1e-05 0.0011 20.5 1.9 1 23 446 468 446 468 0.98

7 14 9.2e-06 0.001 20.6 1.2 1 23 474 496 474 496 0.99

8 14 6.8e-06 0.00074 21.0 0.7 1 23 502 524 502 524 0.99

9 14 9.3e-05 0.01 17.4 3.1 1 23 530 552 530 552 0.98

10 14 0.002 0.22 13.2 3.0 1 23 558 580 558 580 0.96

11 14 2.7e-06 0.00029 22.3 0.3 1 23 586 608 586 608 0.98

12 14 1.6e-05 0.0017 19.9 3.7 1 23 614 636 614 636 0.97

13 14 2.9e-06 0.00031 22.2 5.6 1 23 642 664 642 664 0.99

14 14 8.1e-05 0.0089 17.6 3.5 1 23 670 692 670 692 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	9.7e-07	0.00011	23.7	4.2	1	23	307	329	307	329	0.99
2	14	1.4e-06	0.00016	23.1	0.7	1	23	335	357	335	357	0.99
3	14	4.6e-05	0.005	18.4	2.5	1	23	363	385	363	385	0.93
4	14	9.2e-05	0.01	17.4	5.7	1	23	391	413	391	413	0.98
5	14	2.7e-05	0.003	19.1	8.0	1	23	419	441	419	441	0.99
6	14	1e-05	0.0011	20.5	1.9	1	23	446	468	446	468	0.98
7	14	9.2e-06	0.001	20.6	1.2	1	23	474	496	474	496	0.99
8	14	6.8e-06	0.00074	21.0	0.7	1	23	502	524	502	524	0.99
9	14	9.3e-05	0.01	17.4	3.1	1	23	530	552	530	552	0.98
10	14	0.002	0.22	13.2	3.0	1	23	558	580	558	580	0.96
11	14	2.7e-06	0.00029	22.3	0.3	1	23	586	608	586	608	0.98
12	14	1.6e-05	0.0017	19.9	3.7	1	23	614	636	614	636	0.97
13	14	2.9e-06	0.00031	22.2	5.6	1	23	642	664	642	664	0.99
14	14	8.1e-05	0.0089	17.6	3.5	1	23	670	692	670	692	0.99

Sequence Information

Coding Sequence: ATGGGTAGTTTATCGATGTGCAGAATATGTCTGACCGAAGATATTCGTATGTTTTCCATAGCGAAAACTTATCTGCAAGAAACTTATGAGAAGCTGACCGGTATTCCGTTCAACAGACAAGATGGCCGACCCTCGCATATGTGCTACATATGTCGTGCGAGACTCCACAACTGTCATCAGCTGAGAGCAAACTGTCTTGAGAGTGAGGAACAGCTCACATGGATGTTAAGAAACAATTGCTTAAAGCCAAAATCATTACAAAATTTCCATACGCCTAAAATTCATCACCCGGTGATAAATATGGAATGTACAGATGCTACTCTGGAGGTCTCCGATGATAATTTGGATGCTGTTGAAATAAAATGTGATATTCAAGTGAAACTGGAGAATATTGAAGATGGTGAAGTTGATGTTATTGATGATGAAGTCATCACTGATACAAACACAGAGCCGACGGCTGCAGTTAAATATGAACGTATTGGTGATGATGTATCAGGTAATAGACACAACGTGAGCGACAGAACAAACAACATGACAGTTGAAATAAATGTACACGATAATGTTAAAACAGAGAACAACAGACATACTGTGGAACTGAATGATGAACTGACACTCTGTGATGGCAGTGTTAAGACTGAGAGTGATCGCAGCATCCCTGATACACAGCTCACAAATGATACACGCACAAAgagatctaaatatatattgaacagAAGTAATTCGGAATTGTCTAAAGCAAATTCGGTAGAGACAGTGAGACCTGGACAAATTGCAGTTAAAGAATGGCAGAGCGAACTTGTTACGGCtgtaaaatgtaaacaaaatggAGAAACAGCTTATACAAAAcgtgataatgataaaaatattaaacagaaaaaaattaacaataaattaaatacgagTTCAAGTGAAAAACCATATAAGTGCGAGATATGTGATAAAAGTTTTAGTCATATGAGTACTTTACGTACACACAGCCGTACTCACACCGGTGAGAAACCATATCAGTGTAATATGTGTGAGAAATCGTTTAATTATGCTCAAGGTTTGCAAATTCATATACGTAAACACACCGGTGACAGACCTTTTAAGTGTAATATGTGtgataaaagtttttatttgaaGAGCCATTTAGTGAGTCATATACCTACACATACTACAGAAAAACCATATAAGTGCGACGCATGTGAGAAATGTTTTAAACTGAAGGATCAATTACGAAAACATATGCATATACACACTCGTGAAAAGCCTTATAAGTGTaatatgtgtgaaaaatgttttaattataaacataacTTGTACAATCATATCCGCAATCACTCCGGTGAGAAATATAAGTGCGAGGTATGTCAAAAGTGTTTTAGTTATGCTCAGGGCTTGAAAAGTCATATTGGAACACATACTGGTGAGAAAacatttaaatgttatatatgcaGTAAGAGTTTTTATCTGAAGGGTACACTTGCGAAACATATCCGTATACATACTGGTGAGAAACCGTATAAGTGTAGCATATGTGAGGATAGTTTTAGATCAAAGGATCAATTGAGAGCGCATATACTTAAACACACAGGTGAAAAGCCATTTAAGTGTGATACGTGTGAGAAATGTTTTAGTCAAAAGGCCAGATTGATAATGCATACACAAATACATTCCGGTGAAAAACCACATAGGTGTGACGTATGTGATAAATCATTTCTTCATAagcctaatttattaaaacattcgCTTATACACACCGGTGAACAACCATACAAATGTGATGTATGCGGAAAAGGTTTTGGGCAAAAGCGTAATTTAGTCAATCACACACTTATACATACAGGTGAAAAGCCATACAGATGTGATATATGTGAGAAGAGTTTTAGACATAAACATAATCTAGTACTCCACAAGGCTATACACACTGGTGAGAAACCATACAAATGTGAGTTATGTGAGAAATGCTTTACTcataagtataatttaaaaatacatgccCGTATACACACAGGTGAGAAACCGTATAAGTGTGAAATATGTGAGAAATGTTTTACAATGAAACAGATATTGAATAGGCATGTTCGGACACATACCGGTGAGAAAGCCCCTTAA
Protein Sequence: MGSLSMCRICLTEDIRMFSIAKTYLQETYEKLTGIPFNRQDGRPSHMCYICRARLHNCHQLRANCLESEEQLTWMLRNNCLKPKSLQNFHTPKIHHPVINMECTDATLEVSDDNLDAVEIKCDIQVKLENIEDGEVDVIDDEVITDTNTEPTAAVKYERIGDDVSGNRHNVSDRTNNMTVEINVHDNVKTENNRHTVELNDELTLCDGSVKTESDRSIPDTQLTNDTRTKRSKYILNRSNSELSKANSVETVRPGQIAVKEWQSELVTAVKCKQNGETAYTKRDNDKNIKQKKINNKLNTSSSEKPYKCEICDKSFSHMSTLRTHSRTHTGEKPYQCNMCEKSFNYAQGLQIHIRKHTGDRPFKCNMCDKSFYLKSHLVSHIPTHTTEKPYKCDACEKCFKLKDQLRKHMHIHTREKPYKCNMCEKCFNYKHNLYNHIRNHSGEKYKCEVCQKCFSYAQGLKSHIGTHTGEKTFKCYICSKSFYLKGTLAKHIRIHTGEKPYKCSICEDSFRSKDQLRAHILKHTGEKPFKCDTCEKCFSQKARLIMHTQIHSGEKPHRCDVCDKSFLHKPNLLKHSLIHTGEQPYKCDVCGKGFGQKRNLVNHTLIHTGEKPYRCDICEKSFRHKHNLVLHKAIHTGEKPYKCELCEKCFTHKYNLKIHARIHTGEKPYKCEICEKCFTMKQILNRHVRTHTGEKAP*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -