Basic Information

Insect: Lymantria monacha
Gene Symbol: -
Assembly: GCA_905163515.1
Location: LR991104.1:23959325-23964971[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 7.9e-07 8.7e-05 23.9 0.4 1 23 185 207 185 207 0.98

2 14 0.0086 0.94 11.2 5.1 1 23 213 236 213 236 0.96

3 14 2.5e-06 0.00028 22.3 0.3 1 23 242 264 242 264 0.98

4 14 1.3e-05 0.0014 20.1 2.8 1 23 269 291 269 291 0.99

5 14 7.4e-06 0.0008 20.9 3.6 1 23 297 319 297 319 0.99

6 14 8.3e-07 9e-05 23.9 1.1 1 23 325 348 325 348 0.95

7 14 6.1e-05 0.0066 18.0 2.8 1 23 354 376 354 376 0.97

8 14 1.8e-05 0.0019 19.7 0.8 1 23 382 404 382 404 0.98

9 14 0.0001 0.011 17.3 2.6 1 23 410 432 410 432 0.99

10 14 8.6e-08 9.4e-06 27.0 0.7 1 23 438 460 438 460 0.98

11 14 2.1e-06 0.00023 22.6 3.5 1 23 466 488 466 488 0.98

12 14 0.075 8.2 8.3 2.9 1 23 494 513 494 513 0.95

13 14 1.2e-06 0.00013 23.4 0.8 1 23 519 541 519 541 0.98

14 14 0.00018 0.02 16.5 4.1 1 23 547 569 547 569 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	7.9e-07	8.7e-05	23.9	0.4	1	23	185	207	185	207	0.98
2	14	0.0086	0.94	11.2	5.1	1	23	213	236	213	236	0.96
3	14	2.5e-06	0.00028	22.3	0.3	1	23	242	264	242	264	0.98
4	14	1.3e-05	0.0014	20.1	2.8	1	23	269	291	269	291	0.99
5	14	7.4e-06	0.0008	20.9	3.6	1	23	297	319	297	319	0.99
6	14	8.3e-07	9e-05	23.9	1.1	1	23	325	348	325	348	0.95
7	14	6.1e-05	0.0066	18.0	2.8	1	23	354	376	354	376	0.97
8	14	1.8e-05	0.0019	19.7	0.8	1	23	382	404	382	404	0.98
9	14	0.0001	0.011	17.3	2.6	1	23	410	432	410	432	0.99
10	14	8.6e-08	9.4e-06	27.0	0.7	1	23	438	460	438	460	0.98
11	14	2.1e-06	0.00023	22.6	3.5	1	23	466	488	466	488	0.98
12	14	0.075	8.2	8.3	2.9	1	23	494	513	494	513	0.95
13	14	1.2e-06	0.00013	23.4	0.8	1	23	519	541	519	541	0.98
14	14	0.00018	0.02	16.5	4.1	1	23	547	569	547	569	0.98

Sequence Information

Coding Sequence: ATGTCATATGTGTGGAATGTAAGCGAATTGTGTCGATGTTGTCACACTGAAAGCAATACAAGCTTAAATGTGTACACGAAAGATGAGATTGAACAAGACTATCGTATATTGTTAAAAGATACTTTTGATATTTTAATAAACCCATTACCGCAGCACCCAGAACTGAGATATAATATTTGTGGTACTTGCGAACCCAGACTGAAAGAtgctgtattatttaaaaaacaaatattattttgtgaGAATAAGCTGAGGCAGTATTTATATGATCATTGTGAATTTAaagGGTTGAAAGAAGAATTAACACATACAGATGACAACAGCGGATTGGATTTAAAATATGACGAAGACCGATTCGAACATATGGATATCTACCTCGCCACTGAAGATGACCAACCATTATCTCAATTAAGGCATGGAAAACGTTCGAATCTCTTACAATCggatgagaatgatgatcaagATGGAGAAGCTGATGACGAATGGAGAGGAATGGCGTCGAATTTGAGTGATGacgATGACACGAAAGAGAAAAGAGCCAAATCTAAAAAGTATTCTTGTGATATTTGTCAAAAGCAATTCTCATATAACGGCTCTCTGGAGGTTCACATGAAAGTCCACAATGGGGAGAAATCATTCACCTGTCACATATGTAAAACATCGCATACAAATAACAAAGAATTAACAAAACACATAACAATAACACACATTGTTGATAACCAATACCCCTGTAACGTTTGCGAAAAAGTCTTCGACAAAGCTAGGCTATTAaagaaacatataaaaatacactttaTCGAAAAATTCAAATGTCAACAATGTCAAAAAGAGTTTCAACGTAAAAAAGGTTTGAAGGAACACATGAAAATACATACAGGTGAAAGGAAATATACTTGCGACGTGTGCAACAAGTCTTTTGGGCACAATCAAACGTTAAAGTCACATATGTATACACATACCGGGGAGAGACCTTACGTTTGTGATGTCTGTGGTAGAAGATTTCCACAGAGAACACATTTAAAAaggcatatatttattatacatacaggCATTAAACCTCATAGCTGTAATATATGCTATAAACAGTTTTCTAGCAAAAGTTATTTAGCTATACACGAAAGACAACATACAGGCGAAAAGCCTTACTCGTGTGAAGTCTGTAAAAAGGATTTCACAGCTTATACGACTTTGAAAGTGCATATGCGCGTTCACACAGGTGTCAAACCGTATACGTGCAGTTTTTGTAATAGGCAATTCGCTCAAATGGCCAGTTTTAAGCTCCATCAAAGAACTCATACAGGCGAAAGACCATTTTCttgtaaaatttgtaaaaaacccTTTTCGGATAACGGTTATTTGAAAATTCATATGCGTGTACATTCTGGAGAAAAGCCGTTTTCTTGTGAGATATGTAAAAGGTGTTTCAGGGAGACTGGGCAATTGAAGAGGCATATGCGGGTTCATACTGGAGTCAAGCCTTACACTTGTAAAATTTGTAACAAGCAAATTGGTAATTTATCGAAGCATATGCGGGTTCATTCCGATGAAAGGCCTTTCAGTTGTAATGTCTGTAATAAACAATTTTCTATTAATGGTAATTTGAAATTGCATATGCGTATACATACAGGGGAGAGACCGTTTACTTGTGACGTATGCAGCAGTCAGTTTACACAGAGTAGTGGATTGAAAAGGCATAGATGTACTcatgttaaaaattataatttgggcTCTTGA
Protein Sequence: MSYVWNVSELCRCCHTESNTSLNVYTKDEIEQDYRILLKDTFDILINPLPQHPELRYNICGTCEPRLKDAVLFKKQILFCENKLRQYLYDHCEFKGLKEELTHTDDNSGLDLKYDEDRFEHMDIYLATEDDQPLSQLRHGKRSNLLQSDENDDQDGEADDEWRGMASNLSDDDDTKEKRAKSKKYSCDICQKQFSYNGSLEVHMKVHNGEKSFTCHICKTSHTNNKELTKHITITHIVDNQYPCNVCEKVFDKARLLKKHIKIHFIEKFKCQQCQKEFQRKKGLKEHMKIHTGERKYTCDVCNKSFGHNQTLKSHMYTHTGERPYVCDVCGRRFPQRTHLKRHIFIIHTGIKPHSCNICYKQFSSKSYLAIHERQHTGEKPYSCEVCKKDFTAYTTLKVHMRVHTGVKPYTCSFCNRQFAQMASFKLHQRTHTGERPFSCKICKKPFSDNGYLKIHMRVHSGEKPFSCEICKRCFRETGQLKRHMRVHTGVKPYTCKICNKQIGNLSKHMRVHSDERPFSCNVCNKQFSINGNLKLHMRIHTGERPFTCDVCSSQFTQSSGLKRHRCTHVKNYNLGS*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00707185;
90% Identity: -
80% Identity: -