Lmon031866.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Lymantria monacha
Gene Symbol
-
Assembly
GCA_905163515.1
Location
LR991103.1:12638658-12640844[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.8e-10 1.2e-07 32.5 0.0 3 36 6 39 4 45 0.91

Sequence Information

Coding Sequence
atgaaATATAACGCTGAGAACTTAAAAAAGGCCTTAAATGCTGTTAAAAACGGCATGAGTAAGAAACAAGCTGCAAAAGAATTTCAGGTACCGAGGTCTACAATACAGTTTAGATTAAATAACCCTACTAAAGAATATTTTCGTCCTGGTCCGACAACTGTGTTAACAGAGACTGAAGAAAGTATTCTAGTTAATTGGATAGTACAAAGTGCCAAAAAGGGATTTCCTCGCCGGAAAGAAGATATTCAATATAGTGTGTCTGATTTTTTAAGAAAGAGTAATAGACAAAAtcctttcaaaaataatattccagGTGATAAGtggctaaaattatttttaagaagaCATCCTGAAATTACCATACGCTCTCCAGAATCTGTGACGGCTGCAAGTTCGGTAGTATCAGAAAGCGATATCAAAGGATggtttaataatattgaaagttatttaaaagataatggCTTTTTTGACATTCTTTCAGACCCAAATAGAGTTTTTAATGGCGACGAGACTAATTTTTTGTTGTGTCCTAAGACAGGTGTGGTTTTAGCATTAAAAGGtgataaaaatgtttatgaaaTAGATAGAGGTCAAGCAAAATCTGCTATAACCGTAATGTTTACTTTTTGTGCAAATGGCGACATAACACCTCCTATGGTAATTCTACCCTATAAGCGTCTTCCTGGAGAAATAGCTTCTAAAGTCCCGAAAGAATGGGGCATTGGATTAAGTGACAATGGCTGGATGAAGGCGGAcctattttatgaatatattaataatgtctTGTACCCATATCTTATAAAGCAGGGTAAAATCTTTCCCGTCATTTTATTTGTTGATGGACATAAGACTCATCTAACGCTGCAAGTCAGTGAACTTTGTAcggaattaaaaattatacttattGCTCTTTACCCTAATTGCACTAGAATTTTACAGCCTGCTGATGTAGCCGCATTTTTTCCTTTAAAATGTGCGTGGAAGCAAAATGTTCTTCAATGGCGACGGAACCATCCAGCACAAGCGTTAACAAAAACCGAATTTGTACCTATTTTAAAAACTGCAATGGAGGTTTCTTTGAAACGTGAAACCATTAAAAATGGATTCAGGGCTTGTGGTCTGCAGCCATGGAATGCCGATGCATTGGACTTCACAAAATGTTTAGGTGAATCTAAGGTAAAAGAGGCTTGTCTAGCTCaaactccaaaaaatagtaATTACGATCGACAAATGACTAaagaagattttattaaaattattggtgtagaaaatataaataaacttaatcAAGAAGATCAAGACATTATACCAAATGCTTCAAAATTTCTTAAACACATTTGGAtgtattttaatgaaacaaggAACATAGAAACATCTAATTCTAGAGAACTAGACTCTCTCTCCCaagaacaattaaatattagtaGTATGCCGGTAGTTATAGCAGATAACTTAAATGAACCAATTAATGAGACTTCTATTGCAGTTTCCCatgaaattgaaattgaaaatacCCCGGAACTTAACCTGCTCCCCCGTCAGCGAGAAGTTCTCTCTCCACTTCAATTAAACATTAGAAATGATCTTATTGTACCTACAGatgacaaaatatataatatacgagaCATGGAATTACCAAAACTTATTACATCATATGCTTCACGTCCCAATACTCCGCGTAAGCTAAATTTAACACCTGTCgatcttaatgatattttagtACTGCCCAAAACACCTAAACGAAAAGGTACCAAAAATTCTGAAAAGGCACCATTTGTCTTAACTTCCGAAGAATGGAAgcgaataaatatagaaaagaaAAGGGCAAAAGAGTTAAAAGAAGAAgggattaaaaaaagaaaattagaacgagaacaaaaaaaaatacttatgcaGAAAACCAAGAAACAGCACATAGAAAGAAGCAAAGGAAATAACGTTAAAAATGTTaagaaaaatctattaaataagGAGTTTTATTTGCCAGATCCAATAAACACtgatgaaaaaagaaatgttgtggCAAATACCTGTAAAAAATTAGAACTCAAATTAAATGAAGAGAAAACTGTTTATGAAACATATGATAACGATGATATAATTGCTTCTACTTCAAGTGGGATTATACATAAGGCTTACACAGCGGCACAAATTTTTGATATGTTGGCTGATTCGGATGATGACTGA
Protein Sequence
MKYNAENLKKALNAVKNGMSKKQAAKEFQVPRSTIQFRLNNPTKEYFRPGPTTVLTETEESILVNWIVQSAKKGFPRRKEDIQYSVSDFLRKSNRQNPFKNNIPGDKWLKLFLRRHPEITIRSPESVTAASSVVSESDIKGWFNNIESYLKDNGFFDILSDPNRVFNGDETNFLLCPKTGVVLALKGDKNVYEIDRGQAKSAITVMFTFCANGDITPPMVILPYKRLPGEIASKVPKEWGIGLSDNGWMKADLFYEYINNVLYPYLIKQGKIFPVILFVDGHKTHLTLQVSELCTELKIILIALYPNCTRILQPADVAAFFPLKCAWKQNVLQWRRNHPAQALTKTEFVPILKTAMEVSLKRETIKNGFRACGLQPWNADALDFTKCLGESKVKEACLAQTPKNSNYDRQMTKEDFIKIIGVENINKLNQEDQDIIPNASKFLKHIWMYFNETRNIETSNSRELDSLSQEQLNISSMPVVIADNLNEPINETSIAVSHEIEIENTPELNLLPRQREVLSPLQLNIRNDLIVPTDDKIYNIRDMELPKLITSYASRPNTPRKLNLTPVDLNDILVLPKTPKRKGTKNSEKAPFVLTSEEWKRINIEKKRAKELKEEGIKKRKLEREQKKILMQKTKKQHIERSKGNNVKNVKKNLLNKEFYLPDPINTDEKRNVVANTCKKLELKLNEEKTVYETYDNDDIIASTSSGIIHKAYTAAQIFDMLADSDDD*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00932398;
90% Identity
iTF_00932398;
80% Identity
iTF_00932398;