Lmon002800.1
Basic Information
- Insect
- Lymantria monacha
- Gene Symbol
- -
- Assembly
- GCA_905163515.1
- Location
- LR991082.1:14745822-14747768[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-11 2.6e-09 37.8 0.0 2 37 16 52 15 56 0.89
Sequence Information
- Coding Sequence
- ATGCCAAAATTCAAAGGAAGGATTACGCCTAGAGGAAATTGGgacgaaaataaaatgaaacaggCTATAAGATGTGTACTGGAAAAAAAGATATCGGTGAGAGAAGCAGCTGAGAGATATGACGTGCCGAGAAGCACCCTTCAGGATCGGATAAAAGCTGTCGGTAGTGGACAAGAAGCACAGTTCAAGCCAACACTAGGGAGATATGAACATACCTTCTCAGAAAATCAATCACTGCAATTATATAACCATGTCAAAGACCTCGATAATCGCCTGATGCCGCTGACCAAAGTAGAGTTTTTGAAATTGGCATTTCAATTTGCAGAACGTTTAAAAATACCTCATAGGttcaataaagaaaagaaaatggccggcaaagatttttattatagctTCATAAAGAAATACCCAGATATTGCTCTCAGAAGTCCAGAGTCAACCAGCATTGCAAGAGCCGTTGGGTTTAATAAACCACAAGTCTATCGGTTTTATGATCAGCTCCACCAACTACAAGATAAATACAAATTCCCTGCCTCCAGAATATACAATGCTGATGAAACGGGGGTCTCCACTGTACACAAGAATGAGAAAGTTATTTCTACTAAGGGAAAAAAGCAAGTTGGCAAGTTGACTTCTGGTGAAAGAGGACGAAACATTACATTGATGTTTGCTATGAGCGTGTGCGGCCATTTTATACCTCCACTTTTTATTTTCCCGAGGAAAAGGATGGATAAAAATGGTCGTTTGATGATTGGAGCTCCACCAGATAGCATTGCTATTCCACACGAAAGTGGTTGGATGAATGGTGAGATATTTTTAATGTGGCTCCAGCATTTCAAACAGCACGTACAGCCTTCGAAGGAGAACCCTGTCCTTCTGATTCTCGATGGACATGGAAGCCATAAAGAGTTGGCAGTGATAGAATTTGCTCGAGCTAATCACATCCATATGATTAGCACTCCACCACACACAACACACAAGGTGCAACCTCTGGACAGGGTATTTTTCAAGCCGTTTAAGTCTGCATTTGGTTCAGCAAGCGCAATGTGGATGAGACAAAATCCAGGGGCTAGGATCACTGATTATGACATCGCTGCTTTAGTCAATTCAGCTTTCGTTAAGGCAGCGAGACTAGAAATAGCACAGAATGGGTTCAAATGCACAGGGATTTATCCATTCAATAGGGAAATTTTCAGTGATTTGGATTTTTTGCCATCATTGATGACCAATATTGAACAGGAACCAGCTTTTTCTGAAGAGACAGTCGTGGGATCACAGTTATCAACTAGTTGCAATCAGCAGAAATCCAGATGCTGCAATCAACAGTCATCCTCTAGTGGTACCCAGCAGCCATCCACAAGCTGCAACCAGCAGCCATCCACTAGTTGCACCCAGCAGCCATCCACTAGTAGTAACCAGCAACCATCTACCAGTCTTATATCACACCCATCAGCCAGTGGCAATACGCAGCCATCATTTATGCCCGCATCAACGTCAGAAATTACAGAATCAACTGCACCTGCTACTGTAAATGAATTGCTTAAGCAGTTGTCCCCTCTTCCCGATGCATCCAAGAGGCGTCTTGCAGCGCGTTCacgaaaaacacaaaaaagtgaGATTCTGACATCTTCGCCCTTCAAAAATGCGTTGGTAGAGAAAAAGGCTGCGACCAACACAACCAAGGCTGCAACCAATAAAACTACAACGAATAAAAGAAAGGCGGCaactaataaaatgaaaacaaagaAGAATATTCAAAGTTTGACTCAGCTAGAAAGAGACCACGATACAGAATGCATCATTTGTGGAGAAACGTTCGAGGAAGATTGGATCCAGTGTCATAGATGCAAAGACTGGGCGCACGAAGCGTGTGTGGATATTGATCCATCGCTGGCTTACTACTATTGTGACGTATGCAAGGCTAAAGAACGATTTGGTCATCAGTAA
- Protein Sequence
- MPKFKGRITPRGNWDENKMKQAIRCVLEKKISVREAAERYDVPRSTLQDRIKAVGSGQEAQFKPTLGRYEHTFSENQSLQLYNHVKDLDNRLMPLTKVEFLKLAFQFAERLKIPHRFNKEKKMAGKDFYYSFIKKYPDIALRSPESTSIARAVGFNKPQVYRFYDQLHQLQDKYKFPASRIYNADETGVSTVHKNEKVISTKGKKQVGKLTSGERGRNITLMFAMSVCGHFIPPLFIFPRKRMDKNGRLMIGAPPDSIAIPHESGWMNGEIFLMWLQHFKQHVQPSKENPVLLILDGHGSHKELAVIEFARANHIHMISTPPHTTHKVQPLDRVFFKPFKSAFGSASAMWMRQNPGARITDYDIAALVNSAFVKAARLEIAQNGFKCTGIYPFNREIFSDLDFLPSLMTNIEQEPAFSEETVVGSQLSTSCNQQKSRCCNQQSSSSGTQQPSTSCNQQPSTSCTQQPSTSSNQQPSTSLISHPSASGNTQPSFMPASTSEITESTAPATVNELLKQLSPLPDASKRRLAARSRKTQKSEILTSSPFKNALVEKKAATNTTKAATNKTTTNKRKAATNKMKTKKNIQSLTQLERDHDTECIICGETFEEDWIQCHRCKDWAHEACVDIDPSLAYYYCDVCKAKERFGHQ*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00736552;
- 90% Identity
- iTF_00736552;
- 80% Identity
- iTF_00932357; iTF_00932358; iTF_00932359; iTF_00932360; iTF_00932361; iTF_00932362; iTF_00932363;