Lmon007306.1
Basic Information
- Insect
- Lymantria monacha
- Gene Symbol
- -
- Assembly
- GCA_905163515.1
- Location
- LR991085.1:6339926-6342161[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.3e-12 8.1e-10 39.4 0.0 1 37 53 89 53 93 0.95 2 2 8.7 2.1e+03 -0.3 0.0 22 30 180 188 169 189 0.78
Sequence Information
- Coding Sequence
- ATGTACGCCACCGTGACAGTCGTCCATCAATATGGCTACCAGTTAGGTGTGATAACTGcgatttatttagaaaatatttcaaaatcttTATTAAGTGCTTTGAAACAGTTTGCGatgcCGCGTAATTACGAAAGGAAAACCCTGAGGGCTTCTTGGTCTAACACGGACTTAAATGAGGCTATGCAAAAAGTGCAAAATAAGGAGATGGGAGTCAACGAGGCCGCCAGGGTTTACAATATCCCTTCAAGAACCCTTAGACGACATCTGTTAACAGGAAAACTTAAAGAACCACTCGGGAGACCGCCTGTTTTTTCAAAATATCACGAAAAAAAGCTAGTAGCTCATATCAAAAAATTGGAAAAGGTTGGCTTTGCACCTGACCGCAAGGATGTTAAAGAAATGGCTTACCAGTTACCTCAAAAACTTAGCATTAAAAATCCATTCTCGAACGATACCCAACAAGCAGGTAATATTTGGTTCAACTGGTTCTTAAAACGTAATCCTGAATTGAGTCAGCGAAAGTCTGAAGGTTTGTCACTCGCTAGGGCTTATGGCGTTAATCGAGAAGATGTTAATGATTTTTTCACACTGCTGGCTCAGGCATACGAAGACAATAACTTAGGTCATCATCCagatcaaatatttaatatggatGAGACCGGcatccaaataaataataaacctaCCACAGTAATTGCCAGCAAAGGAGCTAAAGATGTTTACACTTTGACTAGTTGCGAGAAAGGAGAAAATGTCACAGTCATAGCTTGCTGCAATGCTCAAGATACGTTGCGAGAACAAGATCTCATAGATATTAATCaaggaaataataatgttaatgaaTTAGGTGCCTATTCAAAAGTACACAACATTGATAACTATCGTGTAGAAACCGAACCAACAGCTTCGGCAGTGGCAATAACTGAAAACCATATGAATCTGGATAGTGGATCTacctataataaagaaaataggaGTACAGATAATGTTGGAAAAGTTTCTGTTCCTGCACCTGAAAAAACGCCTCAAAAAGGTCGAGAACTGCAGTCAGAATTTTTAGAAGAAACACCTACAAAAGTTTTGACTAACATTCATCCCATACCTAAATTACCAGCAATGATGTTAAAGAAAAAGCAAAGGGCTCTAGTTTTGACATCTccagaaaatatacaaaaaagaaaagcgaTTGAAAAGAGAAAGAAGGATGTTGTGACGAagatatgcaaaaaaaataaagtaacaaaggaaaataaaaaaggaaaatcgGGAAAAAAGAAAGCTACTATTTTCCATTCATCATCAGAaagtgataatgatgaagaaaattataagagCCCATCGAATGAGGATATTTCTGATGAAGAGAACAGGTGCATTGAATgtacagaaaattattattgcacGACTTCTAAAGAAGATTGGATAAAATGTTCATCATGTTCATCTTGGATGCACGAGTTTTGTACCATGTATAATCCTCTTTACAATGTTTGTGGTAAAATAGCTAAACGTCAAGCTGTCAATAAGCTTaggaagacaaaaaaaaataattaa
- Protein Sequence
- MYATVTVVHQYGYQLGVITAIYLENISKSLLSALKQFAMPRNYERKTLRASWSNTDLNEAMQKVQNKEMGVNEAARVYNIPSRTLRRHLLTGKLKEPLGRPPVFSKYHEKKLVAHIKKLEKVGFAPDRKDVKEMAYQLPQKLSIKNPFSNDTQQAGNIWFNWFLKRNPELSQRKSEGLSLARAYGVNREDVNDFFTLLAQAYEDNNLGHHPDQIFNMDETGIQINNKPTTVIASKGAKDVYTLTSCEKGENVTVIACCNAQDTLREQDLIDINQGNNNVNELGAYSKVHNIDNYRVETEPTASAVAITENHMNLDSGSTYNKENRSTDNVGKVSVPAPEKTPQKGRELQSEFLEETPTKVLTNIHPIPKLPAMMLKKKQRALVLTSPENIQKRKAIEKRKKDVVTKICKKNKVTKENKKGKSGKKKATIFHSSSESDNDEENYKSPSNEDISDEENRCIECTENYYCTTSKEDWIKCSSCSSWMHEFCTMYNPLYNVCGKIAKRQAVNKLRKTKKNN*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -