Lmon010794.1
Basic Information
- Insect
- Lymantria monacha
- Gene Symbol
- -
- Assembly
- GCA_905163515.1
- Location
- LR991087.1:23317286-23318053[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-12 3.2e-10 40.7 0.0 1 37 15 51 15 56 0.94 2 2 2.3 5.5e+02 1.6 0.0 22 30 142 150 128 151 0.79
Sequence Information
- Coding Sequence
- atgcCGCGTAATTACGAAAGGAAAACCCTGAGGGCTTCTTGGTCTAACACGGACTTAAATGAGGCTATGCAAAAAGTGCAAAATAAAGAGATGGGAGTCAACGAGGCCGCCAGGGTTTACAATATCCCTTCAAGAACCCTTAGACGATATCTGTTAACAGGAAAACTTAAAGAACCACTCGGGAGACCGCCTGTTTTTTCAAAATATCACGAAAAAAAGCTAGTAGCTCTTATCAAAAAATTGGAAAAGGTTGGCTTTGCACCTGACCGCAAGGATGTTAAAGAAATGGCTTACCAGTTAGCTCAAAAACTTAGCATTAAAAATCCATTCTCGAACGATACCCAACAAGCAGGTAATATTTGGTTCAACTGGTTCTTAAAACGTAATCCTGAATTGAGTCAGCGAAAGTCTGAAGGTTTGTCACTCGCTAGGGCTTATGGCATTAATCGAGAAGATGTTAATGATTTTTTCACACTGCTGGCTCAGGCATACGAAGACAATAACTTAGGTCATCATCCagatcaaatatttaatatggatGAGACCGGcatccaaataaataataaacctaCCACAGTAATTGCCAGCAAAGGAGCTAAAGATGTTTACACTTTGACTAGTTGCGAGAAAGGAGAAAATGTCACAGTCATAGCTTGCTGCAATGCTCAAGGTAACTTTATGCCAcctgttttaatttataaagttaCCTACAGTAAACCTCAGTTTTCTGAAGGACTGCCACCAGATGAGGATACTGGATGGTCATAG
- Protein Sequence
- MPRNYERKTLRASWSNTDLNEAMQKVQNKEMGVNEAARVYNIPSRTLRRYLLTGKLKEPLGRPPVFSKYHEKKLVALIKKLEKVGFAPDRKDVKEMAYQLAQKLSIKNPFSNDTQQAGNIWFNWFLKRNPELSQRKSEGLSLARAYGINREDVNDFFTLLAQAYEDNNLGHHPDQIFNMDETGIQINNKPTTVIASKGAKDVYTLTSCEKGENVTVIACCNAQGNFMPPVLIYKVTYSKPQFSEGLPPDEDTGWS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00932354; iTF_00932335; iTF_00932336; iTF_00932337; iTF_01088272;
- 90% Identity
- iTF_00932335; iTF_00932336; iTF_00932337; iTF_00932354;
- 80% Identity
- iTF_00932335; iTF_00932336; iTF_00932337;