Basic Information

Gene Symbol
ct
Assembly
GCA_905163515.1
Location
LR991101.1:27305639-27308713[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7.4e-32 5.2e-28 98.1 0.0 4 77 285 359 283 361 0.96
2 2 1.1e-30 7.4e-27 94.4 0.0 3 75 488 561 486 565 0.95

Sequence Information

Coding Sequence
ATGAAAACGCCAATAGGACAGGCCCATAATGATGACTCCAGGAGTAATGAAGACTCCAGCTCACCGAGGACACAGTGCCCATCACCTTTCTCCAAGGACTCCAGTCAAAATAGGAGACTGAAGAAATATGAGAACGATGACATTCCTCAAGAAAAAGTAGCACGCATCTATCAGGATGAGCTCACCAAAATTATGACCAGAAGGGTGGAGGATATGCGGCGAGAAGGTTTCCCTGGCATGTTTCCTCCATTTTTCAGCGGCGGCATGCCACCACACATGGAAAGACCACCAGAAGATATTCGTATGGCCCTAGAAGCTTATCATAGAGAACTTGCCAAAATCCAGCCTGCTGGCAACATTCCCAATCTTCACAACTTGCCAGGGATGCCGCCATTCCCCAACCTACTTGCATTGCAGCAACAAGCTATGCACCAAGCGCAGAACCAGCAAATGAATGGCTCTGGAGCGATCCAAGATCTCTCTTTGCCTAAAGATAAAATCGCCAAAATTAATGGAATGACTGATAGTGATAAGGATAGGCCAATGGACGCTGAAGAGGCTATAAGACATGCTGGAAGCGCGTTCTCATTAGTAAGACCAAAATTGGAGCCAGGGCAGCAGTCCACAGGCTCGTCAGCATCGAGCCCACTGGGCAATGCAATACTACCTCCCGCAATAACACCGAATGACGACTTTAGTAGTTCCGCAGCAGCAAGCCCGCTGCAAAGAATGGCATCGATTACGAATAGTCTTATTTCCCAGCCATCAAACCCTCCTCATCATTCAACCCCACAACGATCCATGAAGGCAGTTCTACCCCCAATAACACAGCAACAATTTGATctctttaataatttgaataccGAAGACATAGTGAGGAGAGTAAAGGAAGCACTGAGCCAGTATTCGATCAGCCAAAGACTATTCGGTGAATCCGTCCTTGGACTGTCGCAAGGATCTGTAAGTGACTTGCTGGCTAGGCCGAAGCCTTGGCATATGTTGACACAAAAAGGGAGAGAACCATTCATCCGCATGAAGATGTTTTTAGAAGATGATAACGCAGTTCACAAACTAGTCGCGTCACAGTACAAAATCGCACCTGAGAAGTTAATGAGAACTGGAAATTACAGTGGAGCACCTACCTGTCCGCCAAACATGAACAAACCTATGCCTCCGACACAAAAGATGATATCTGACGCTACTTCATTGCTGAGTAAAATGCAACAAGAACAGCTGCTAGGTGCGGGTCATCTTGGGCATCTTGGCCAGCCTACACCCCTATTACTGACGCCACCCGGATTTCCCCCACATCACGCGGTGACACTGCCCCCGCAGCATCACGACAATAACAACAAGGAAAGGAAACCTCCACCTCCGCCTCAACCTCACCATCCACCAGTAGTTATGCGCAACCTCCACCAGCACATATCGCCAAGTGTATATGAAATGGCTGCCCTAACACAAGACTTAGATACTCAAACCATTACTACGAAAATCAAGGAAGCGTTACTAGCAAACAATATTGGACAAAAAATTTTTGGCGAAGCTGTCTTAGGTCTTTCACAGGGTTCCGTTAGTGAATTGCTATCAAAACCAAAACCCTGGCATATGCTCAGCATTAAAGGTCGAGAACCATTTATTCGTATGCAATTGTGGTTAAGCGATGCTCATAATATCGACCGTTTGCAAGCTTTGAAGAATGAGAGACGAGAGGCGAGTAAACGGCGGAGGTCCAGCGGTCCCGGACAGGATAACTCTTCTGATACATCATCAAATGACACTTCTGAGTTCTACCACTCGAGTTCACCTGGCCCAACAGCTGGGGCACCCTGTGCTAAGAAACAGCGAGTTCTTTTCTCTGAAGAACAAAAAGAAGCGCTCAGACTAGCCTTTGCACTTGATCCCTATCCAAATATGCCAACGATAGAATTTCTTGCGGCAGAACTGGGTTTATCATCGAGAACTATCACCAACTGGTTCCACAATCATCGTATGCGTTTAAAACAGCAAGCGCCACATGGATTACCCGCAGAGCCTCCAGCGCGTGACCAGTCCTCAGCACCGTTCGATCCTGTACAGTTCCGGCTCTTACTCAACCAGAGACTATTGGAGCTACAAAAGGAAAGAATGGGTCTAGCGGGTGTGCCGCTACCGTACCCACCATATTTTGCGGCCAATTCAAATTTAGCTGCTTTAATGAGCCGAGGTCTCATACCCCCGGATGAACAAGCAAAAGATCAGTCAGGCGGACTGGATCTGTCAATGCCACTTAAACGCGAGCACGATGGTGATGATTTCGAGGATGAAGACGCAGAGAGTAACCTTGGCTCGGATGATTCGatagatgatgaaaataaaatcgAGCCCAAAGCGACGTCGACGCCAGCCGGACGATCCAATCGACGAAAGCCCGCCGCCCCGCAGTGGGTCAATCCTGACTGGCAAGACGAGAAGCCACGAAACCCAGATGAAGTGATAATCAATGGTGTGTGTGTGATGAGAAGTGATGACTTTAGACGCGAAGCCGAGGAGACGGTACGGGTGGAACCGTCGCCCGTGCCTAGGGACAGCTCGCCCGCCACTCTGCGCGCGCCGCGAGAGGTCTCCCCCGCCAACCCCACGGCGCCCCGCACGCCGCGCACCCCGCACACACCGCACACGCCGCGACCGCCGCACACGCCTGATGACGTCATTCCTGAGGACAAAATCAAAGCGGAGGCGGAGGACCCCTGGGAGTACTAG
Protein Sequence
MKTPIGQAHNDDSRSNEDSSSPRTQCPSPFSKDSSQNRRLKKYENDDIPQEKVARIYQDELTKIMTRRVEDMRREGFPGMFPPFFSGGMPPHMERPPEDIRMALEAYHRELAKIQPAGNIPNLHNLPGMPPFPNLLALQQQAMHQAQNQQMNGSGAIQDLSLPKDKIAKINGMTDSDKDRPMDAEEAIRHAGSAFSLVRPKLEPGQQSTGSSASSPLGNAILPPAITPNDDFSSSAAASPLQRMASITNSLISQPSNPPHHSTPQRSMKAVLPPITQQQFDLFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGAPTCPPNMNKPMPPTQKMISDATSLLSKMQQEQLLGAGHLGHLGQPTPLLLTPPGFPPHHAVTLPPQHHDNNNKERKPPPPPQPHHPPVVMRNLHQHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQALKNERREASKRRRSSGPGQDNSSDTSSNDTSEFYHSSSPGPTAGAPCAKKQRVLFSEEQKEALRLAFALDPYPNMPTIEFLAAELGLSSRTITNWFHNHRMRLKQQAPHGLPAEPPARDQSSAPFDPVQFRLLLNQRLLELQKERMGLAGVPLPYPPYFAANSNLAALMSRGLIPPDEQAKDQSGGLDLSMPLKREHDGDDFEDEDAESNLGSDDSIDDENKIEPKATSTPAGRSNRRKPAAPQWVNPDWQDEKPRNPDEVIINGVCVMRSDDFRREAEETVRVEPSPVPRDSSPATLRAPREVSPANPTAPRTPRTPHTPHTPRPPHTPDDVIPEDKIKAEAEDPWEY*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00622600;
90% Identity
iTF_01335819;
80% Identity
iTF_00932300;