Basic Information

Gene Symbol
kn
Assembly
GCA_905163515.1
Location
LR991090.1:11594011-11608650[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 9.9e-121 1.4e-116 391.4 0.0 205 387 1 201 1 205 0.99
2 2 1.7e-07 0.0024 17.5 7.9 421 553 211 357 202 380 0.58

Sequence Information

Coding Sequence
ATGCGGGCTACACAGGTGGTAATATCAACTCAAGTGATGGTAGACGGTCCTCTGCTAGCAATATCAGACAACATGTTCGTCCATAACAACAGCAAACACGGCCGAAGAGCGAAGCGATTAGACCCTAGTGAAGGTATAGAAGTCGCCACAGACAATACTTCAGGTCTGTATCCCCCGTTGCCAGTAGCAACGCCGTGTATAAAAGCAATATCACCGAGCGAAGGTTGGACATCGGGTGGTTCAACCGTCATCATTGTAGGGGATAACTTCTTCGATGGATTGCAAGTTGTATTTGGAACAATGCTCGTATGGAGTGAGttAATAACATCGCACGCAATAAGAGTTCAGACGCCGCCGAGACATATACCAGGTGTTGTGGAGGTGACGCTCTCGTATAAGAGTAAACAGTTCTGTAAGGGAGCACCTGGCAGATTTGTTTACGTTTCAGCGTTGAACGAACCAACGATAGATTATGGCTTTCAGAGACTACAGAAACTTATACCGAGACATCCCGGCGACCCAGAAAAATTACCTAAGGAAATAATACTAAAACGTGCAGCAGACTTAGCAGAGGCACTTTACTCAATGCCACGAAATAATCAACTTGGTTTGGGTGGTCCTCGATCTCCACCTTCGAGTATGTCTTTTAATTCATATACTGGACAACTGGCGGTGAGCGTGCAAGACACTGCAGCCTCGCAGTGGACTGAAGAGGAGTTCGCGCGTAGCGGTGGCTCGGTATCACCGCGATACTGTAGCGCGGCGTCTACGCCACACGCTGCTCCGCCTGCATATCCGCATCCGCAGCATTATCCCGCACCGCCTACCTCACTATTCAACACTAGCTCACTGTCTCTAGGACCTTACCACCCGGCGAACATGAATGGACACTTATCATCTGACCGTCACTATAACGCGTATAATACGAAAGATAGCGGACATTACAGTGAAAGAAATAGCTCTAAAAGCATGGCCGACTGTCCGGTAAACATTCATACAAAATGCACCTACAGCGATATGAAAGGGGCACTGACTAAAGAGGCTAAACTGAGAAGCGCCTTTGCCGTTGTGAGGCAAGGAATGGGTGGGCTGGTCTCGTCGCCATTCAGCGTAAATCCTTTCTCTCTGCCGACGTGTAACGCTCAGCAATATGCACAAACAGCACCTCTCGCATCCAAATAG
Protein Sequence
MRATQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPSEGIEVATDNTSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGGPRSPPSSMSFNSYTGQLAVSVQDTAASQWTEEEFARSGGSVSPRYCSAASTPHAAPPAYPHPQHYPAPPTSLFNTSSLSLGPYHPANMNGHLSSDRHYNAYNTKDSGHYSERNSSKSMADCPVNIHTKCTYSDMKGALTKEAKLRSAFAVVRQGMGGLVSSPFSVNPFSLPTCNAQQYAQTAPLASK*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00036409;
90% Identity
iTF_00176893;
80% Identity
-