Ldis008330.1
Basic Information
- Insect
- Lymantria dispar
- Gene Symbol
- pnr
- Assembly
- GCA_032191425.1
- Location
- CM063445.1:599085-610652[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.44 2.7e+03 -0.5 0.1 15 24 62 71 60 72 0.82 2 2 2.7e-18 1.6e-14 54.5 5.1 1 34 119 151 119 153 0.98
Sequence Information
- Coding Sequence
- ATGATTCAAAATAGATGGTGTGTTCGAGACCCAGGAGGAGGGTCGGGAGTGTGTCAACTGTGGCGCGAACAACACGCCTCTCTGGCGACGCGACGCCACCGGTCACTACCTGTGCAACGCTTGCGGACTCTACCACAAGATCAACGGCGTCAACCGACCACTAGTGAAGCCCAGCAAGCGGCTGGTGAGCATAACCAACCAACGCTGTGTAGTAACGCGCTCTGTCTGCAAACAGGTGCCGACGCGGACCTACTCACGCGCTTCTATAAGGAGGGCACCGTGCAGAGGTGGATGAGTGTCGAGGGCATGGCCAGGGGCATGAAGAAGTCGGCGCAGAGGCGTCACGGCCAGTGTTGCACCAATTGCGGCTCGCGTAACACCACACTGTGGCGACGGAACAATGACGGCGAGCCCGTGTGTAATGCGTGCGGACTTTACTTCAAACTTCACGGTATTAACAGACCTTTAGCAATGCGGAAGGATGGCATTCAAACACGAAAACGCAAACCGAAGAAGTCAGGAAATGGGACGAAACCTCCGCAGGAAACGAACAAGAAGGATGACCACAGCTCACCCGGGATGGACGacAGTAAACAAAGTATAGGAGAGATGCCCCTCCAGCTGAGTCAGCCCATGGTGAGTCAGGGTGTAAAGTCACGCGAGTCGGTGGGAGCGGGGACATCTCCTCACGCACACGCGCACACCCACGCTCAGGCAGGGGGCGGAGCGCACGCGCACGCACAGTACAGTCCCCTGGCGCTGCCGGGCGCTCCATTCCTGTCCAATCCGGCGCTGTTCAACATCAAGAGTGAACCGAGTGCCGCGGCCGGGTACGACGCATACTCCGCGCACTCCGGTGGACATTACCATACGCAACAGCATTATCTGCACGCGTTACAGTATGGTCTCGGCAACGGCGAGGAGGAAGAAGCAAGCGGTTTCTTACACCAGCGCAACGTAACTGCGCACGCGAAGCTCATGGCTTCCACGTAG
- Protein Sequence
- MIQNRWCVRDPGGGSGVCQLWREQHASLATRRHRSLPVQRLRTLPQDQRRQPTTSEAQQAAGEHNQPTLCSNALCLQTGADADLLTRFYKEGTVQRWMSVEGMARGMKKSAQRRHGQCCTNCGSRNTTLWRRNNDGEPVCNACGLYFKLHGINRPLAMRKDGIQTRKRKPKKSGNGTKPPQETNKKDDHSSPGMDDSKQSIGEMPLQLSQPMVSQGVKSRESVGAGTSPHAHAHTHAQAGGGAHAHAQYSPLALPGAPFLSNPALFNIKSEPSAAAGYDAYSAHSGGHYHTQQHYLHALQYGLGNGEEEEASGFLHQRNVTAHAKLMAST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00889783;
- 90% Identity
- -
- 80% Identity
- -