Ldis029913.1
Basic Information
- Insect
- Lymantria dispar
- Gene Symbol
- Zfy1
- Assembly
- GCA_032191425.1
- Location
- CM063459.1:1027955-1038141[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 26 3.4 4e+02 3.2 2.2 3 23 245 265 243 265 0.95 2 26 1.9 2.3e+02 3.9 0.7 3 23 307 328 306 328 0.92 3 26 2.1e-06 0.00025 22.7 0.6 2 23 351 372 351 372 0.97 4 26 4.4e-06 0.00052 21.7 2.0 1 23 379 402 379 402 0.96 5 26 0.084 10 8.2 0.1 3 23 410 430 409 430 0.96 6 26 7.5e-05 0.0089 17.8 1.9 1 23 436 458 436 458 0.98 7 26 0.065 7.7 8.6 3.0 1 23 581 603 581 603 0.96 8 26 0.00053 0.064 15.1 2.5 2 23 610 632 609 632 0.92 9 26 7.6e-07 9e-05 24.1 0.9 1 23 638 660 638 660 0.99 10 26 1.1e-06 0.00013 23.6 2.6 1 23 666 688 666 688 0.98 11 26 0.0027 0.32 12.9 0.9 1 23 694 716 694 716 0.97 12 26 0.00012 0.015 17.1 3.2 1 23 722 744 722 744 0.96 13 26 0.57 68 5.6 0.2 3 23 785 804 785 804 0.97 14 26 6.8e-07 8.1e-05 24.2 0.5 1 23 810 833 810 833 0.98 15 26 2.3e-05 0.0027 19.4 6.4 1 23 839 861 839 861 0.98 16 26 7.4e-06 0.00088 21.0 0.1 1 23 867 889 867 889 0.99 17 26 1.8e-05 0.0022 19.7 0.1 2 23 895 916 894 916 0.96 18 26 0.023 2.8 10.0 0.7 5 21 925 941 924 941 0.92 19 26 2.1 2.5e+02 3.8 0.4 3 23 1055 1075 1054 1075 0.91 20 26 3.1 3.7e+02 3.3 0.4 1 23 1080 1101 1080 1101 0.89 21 26 0.002 0.24 13.3 1.2 3 23 1219 1240 1217 1240 0.94 22 26 0.0047 0.56 12.1 0.2 1 20 1246 1265 1246 1268 0.93 23 26 6e-05 0.0071 18.1 3.2 1 23 1274 1296 1274 1296 0.97 24 26 0.0096 1.1 11.2 5.7 2 23 1303 1324 1302 1324 0.97 25 26 6.5e-05 0.0078 18.0 1.1 3 23 1332 1352 1330 1352 0.96 26 26 0.0004 0.047 15.5 0.5 1 23 1357 1380 1357 1380 0.96
Sequence Information
- Coding Sequence
- ATGAACGAAACTCAACAAATGTTTACACACAATGCGGGACTGTGCCAACCATCAACATCAACAACAAAACCGACAACTGCACAAGTTAACCTCGAGAATGTACAGGATTTTTCAAATGTATGTCGGACATGTGCAACTATTACAGAATTTGTCATACCTATATTTGCCGGTGAAGGTTTGCAGAATAACTTAGCTGACAAAATACACTCACATCTCCCTATAAAGGTCACGGAGACTGACGTACTGCCGCGTGTGGTATGCTACCAGTGTGCGAGCACGTTACTCGCGTGGCACGAACTTGTCGCATGCTGCCGACATGCCGACGCTGCTTTGAGGACACGCCTTACAGCCGACCCCTCCATACAGACGGATAAGGATCAAAAACTAATCAATACGAAAACAAGTTTGACTTCAGAAGAAGATCCACAAAGCAAGTCCTTTTACATCAATGTCCAAAATGTTTTGGTTGGTTACTTTCCTAACTTGAACATAAAAGATAATTTGGACGTGGAGTTCGTCTGCCAAAAGTGCATGGAGAAACCTATGTTGTCCACAGTGGAAAGTTTGAGTAACCATTTAAGATACGATCACAATTCTGATGTGCATGATGCAGAAACTATTAAAATGTTCataaaaaattatgtaacattTGAAGAAGCATTAGTTTCTGAGGACTCTGACAGGGACGACCAATCCGATATTGGAACAGAGAAGACGTTACCAAATTTGTTTTGTCCTTTTTGTTCGAGTGTGTTTACTTCTCCTACAAGATTGCTTTGTCATCTCAACAAACATTTCGAAGTGTGTATTGAGGATGGTGTTAAGTGCTGTGGTATTGTGTATAGCGACAAGAAAGTTTTCATCAAATATTTACAAGAGGCTCATGTCGATAGAATTATAGAGAATACGTTGAAGGTGTGTAAATGTTGTGGATTTACCGCTGAAAATGTTACTGAATTACAAGCACATATAAACAAAACACACCTTaaaaagattataaataaaGGAAAAAAGTTACAAAGCCCATTAAACCAGAAGTATATACCGGCTGTATGTCCAGAATGTAATAAGACATTTTCCAACAAATACGCCATGTTTGTGCATATGAAGAGTCATAGCGGTGATGTGAATTCGTATTCTTGTGAGAAGTGTAATAAGACTTACAAAAATCGTCAAAATCTAAATAATCACATTAAATTAGTGCATGAGGGGATATTAAACGTGTTATGCACTGAATGTGGTGAGGCGTTTCCGACTCGGACCGCACGCGATGTTCATGCTCGACTACATTCAGGGGTTAAACCCTACAAATGTGGTTATTGCGGCAAATGTTATCGCGCTAAAAATACACTCGACAGACACATAGAAATACATcttaatattagaaaatatgAATGCCAGATTTGTTCCAAAAAGGACTCGCTCGTACTCGGAGATTCAGATGAGTCATCAGATCAATCAGATAATAAACCCCTCGCCACTATAGCAAGTAGAAAATCTTTAAACGCTTATAATCACTTCTACAATGCACTTGTCAACTTTAGAAATCATTTTGTGAATGACCATCAACTGGAAGAGTCATACCCCGATTTTACTGACTCGAGTGTGTCGGAAGTCGACAATAATGACATAGGCAATTTCGACGACTTAACACAGTTTAATATGAGAAAAGACAGAATGAACGAAGAGACCAGACTGGAACTTAGTCAAGTACAAACCAAGATAAATGGAAAATTGTTTTATACATGTACAATATGCGGCAAAAACTTAAGTTCATCGCATACTTACGTGTTTCATAAAAGGATACATACTGGAGAAAGACCTTGTGTGTGTCATATATGTGGTAAACAATTTAGAGCGCCAAACGGACTCCAACGGCATCTGACTCAAACCCATGAACGAATCTTCAGATATACTTGCAATTTGTGTCCTAAAAACTTTGCTAACTCACAGAATTTAAAACAACATTTACGTATACACACAGGCGAGAGACCTTTTGTGTGCTCCCATTGTGGCAAAAGATTCACCCAAAGCGGTTCGCTATACGTGCATCTTAAAACACATAGCGAACAATTCCCATACCATTGCGCAGAATGCGGGGCGAAGTTTCGTTTACGATCTGGCCTTGCGAGGCATAGTCTTAAACATACTGGAGAAAGGCCTCATGTATGTGCTCATTGTGGAAAGGGATTCCGACAACGTTATGAATTGAACACGCACAGTTTATCTCACGCTAACATAAAACCGGTATATACGAAGATCAAATCTGAAGAAGAGGAAGCTGAAGATTCGAAAATAATAATCGAAATCCCGCCCAATTCGTTAAATAAAGACGGCGATCGCACATCGTGGTGTGGTATTTGCAATAAAAGCGTTTCCTTGGTGTACTGGCGGAGGCATGTACGCTTACATAGTGGTGAAAGACGGTACAGCTGTCATACTTGTGGACGCGCCTTCGCTGATAGTGGGAATCTGGCTAGGCACGTGAAGACGTTGCACTCTCAATTGAAGCCATTTTCGTGCTCCATTTGCCACAAAACATTTTCTAGAAGAACGCATCTCAATGATCATGTTAAATCACATTCGGAAAAGCGGGAATATGTGTGTGATATATGTGGGAAAGCATCCAAGTCCAGTGCGGCTTTACGCATGCATACACGCACACACGGTGCACGAACTTTGTCGTgcatggattgtggtgcaacatTTAAGCGAAAGGCTGAACTTCGTGCGCATATAACCGTGCACACGGGGGAGAGAGCTCATGCATGTACGTGCGGGAAGACGTTCAGACTACGCAGTCAACTTAATTCACATGCACGGCCTTGTTGCAGGTCTAAAGAAACCAAGAACTGCCTGTCACGATCTGTCAAGTCCGAGACGTTGTCTATTAGTCCCACAGCCATCGTGAACCAATCTAGTGCGCCTCTTCTCAAATCCATAGCAGCACCGATCAGGCCTTCGCTACTGGTTAAATCAGCTGCACCTCCAATCCAGGTCATGCCTCCCTTGATTCAAACTATAGCGTCTCGATTCCCTGTTATGGCACCACCAGTTCGATTTGTAACGCATACAACTCAGCCCATGATGATTCCCGGCCGGTCCATAGCATCTCAGACCCCAACTTCCACCCGTCAGCTACCTAAATACGCTCACCGTAATTGTGAGTACTGTAACATCATGTACTCGGAAGACAAATATTACCAACATATGGTTTCGAACCATTCGGAACTTGTTTTCTTCTGTGAAGAATGTAACAGATTCATAAGCAAAACGGTTTTAGTGATTCACATGTCGCTTCACGCATATGGTTATATCCCAAAGATAGACGTGGACTGCAAAAAGGGCCAGGCAATTGATGTGAATCAAGATACTGTTCAGATTTCTACGCTAGAAAAAGTTGATGCTGCTTTAACAGCACAAATAAGTAAAACATCGAAAAGCAAGCCAGAAAACGAATTTTCCGATCACAGCGATGTAGAAAATGCTTTTGATCCAATCCCTGAATCAGTGTTTGAAGCTATAGAGGATTCTCAAGACACTCAGACAAGTGATACTAGGCAGACTCCAGAAAGGGAGCATTTCGGTAGTAAATCTGATATTTCAATTCCTAGcaaggaaaattctaaaaaatCGAATAAGAAATCCCAAATATGCCCTATCTGTTCTAGAAAATTTAGTGCGTCTTCCAGTTTCTTCTATCATATGAAATTCACACACAAGAAAGTAAAAGAGCATGAATGCGATGTTTGTTTTAGAAAATTTGCAACACGGGCGAGCCTCGCGGCCCACTTACCCATTCATACCGGAGAGCGTCAATTCGAGTGCAAAGAATGCAAAAAATGTTTTAGATCCAAAGCCAGTTTGTACATACACGAGCAAATCCACAACGGTATAAAAAATATGTCTTGTACTCTGTGTCATATGTCGTTTAGATGGAAGACACATTTAGCCAGGCATATGAAAAGGCACTCTGCAGAAAAAGTCCATTTGTGCGCAACTTGCGGTCGTGGTTTTAGCGTCCGGTACGACTTAATGCGCCATGTAAGGACCCATACTGCAGGTAAATTTGCCTGCGAAGAATGCAGTTTAGTGTTTGCCCAATTAAGGTATTTGAAAACTCACATAAACAAAAAACATCCGACAAAATGTGATACTAATTAA
- Protein Sequence
- MNETQQMFTHNAGLCQPSTSTTKPTTAQVNLENVQDFSNVCRTCATITEFVIPIFAGEGLQNNLADKIHSHLPIKVTETDVLPRVVCYQCASTLLAWHELVACCRHADAALRTRLTADPSIQTDKDQKLINTKTSLTSEEDPQSKSFYINVQNVLVGYFPNLNIKDNLDVEFVCQKCMEKPMLSTVESLSNHLRYDHNSDVHDAETIKMFIKNYVTFEEALVSEDSDRDDQSDIGTEKTLPNLFCPFCSSVFTSPTRLLCHLNKHFEVCIEDGVKCCGIVYSDKKVFIKYLQEAHVDRIIENTLKVCKCCGFTAENVTELQAHINKTHLKKIINKGKKLQSPLNQKYIPAVCPECNKTFSNKYAMFVHMKSHSGDVNSYSCEKCNKTYKNRQNLNNHIKLVHEGILNVLCTECGEAFPTRTARDVHARLHSGVKPYKCGYCGKCYRAKNTLDRHIEIHLNIRKYECQICSKKDSLVLGDSDESSDQSDNKPLATIASRKSLNAYNHFYNALVNFRNHFVNDHQLEESYPDFTDSSVSEVDNNDIGNFDDLTQFNMRKDRMNEETRLELSQVQTKINGKLFYTCTICGKNLSSSHTYVFHKRIHTGERPCVCHICGKQFRAPNGLQRHLTQTHERIFRYTCNLCPKNFANSQNLKQHLRIHTGERPFVCSHCGKRFTQSGSLYVHLKTHSEQFPYHCAECGAKFRLRSGLARHSLKHTGERPHVCAHCGKGFRQRYELNTHSLSHANIKPVYTKIKSEEEEAEDSKIIIEIPPNSLNKDGDRTSWCGICNKSVSLVYWRRHVRLHSGERRYSCHTCGRAFADSGNLARHVKTLHSQLKPFSCSICHKTFSRRTHLNDHVKSHSEKREYVCDICGKASKSSAALRMHTRTHGARTLSCMDCGATFKRKAELRAHITVHTGERAHACTCGKTFRLRSQLNSHARPCCRSKETKNCLSRSVKSETLSISPTAIVNQSSAPLLKSIAAPIRPSLLVKSAAPPIQVMPPLIQTIASRFPVMAPPVRFVTHTTQPMMIPGRSIASQTPTSTRQLPKYAHRNCEYCNIMYSEDKYYQHMVSNHSELVFFCEECNRFISKTVLVIHMSLHAYGYIPKIDVDCKKGQAIDVNQDTVQISTLEKVDAALTAQISKTSKSKPENEFSDHSDVENAFDPIPESVFEAIEDSQDTQTSDTRQTPEREHFGSKSDISIPSKENSKKSNKKSQICPICSRKFSASSSFFYHMKFTHKKVKEHECDVCFRKFATRASLAAHLPIHTGERQFECKECKKCFRSKASLYIHEQIHNGIKNMSCTLCHMSFRWKTHLARHMKRHSAEKVHLCATCGRGFSVRYDLMRHVRTHTAGKFACEECSLVFAQLRYLKTHINKKHPTKCDTN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -