Ldis015533.1
Basic Information
- Insect
- Lymantria dispar
- Gene Symbol
- -
- Assembly
- GCA_032191425.1
- Location
- CM063449.1:30815033-30815947[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.4e-10 1.1e-07 32.8 0.1 1 38 9 46 9 51 0.95
Sequence Information
- Coding Sequence
- ATGCCTCCCAAACGAGCATTGTGGTCGGAAGATGACCTGATCTCTGCTGTACGAGCCGTTGAAAGAGGCACGTTGAGTACTTACAAAGCTGCAGAACGATATAAGATACCTAGAAGAACTATCAGAAATCATCTCCAGTCTGGCAGCTTACAGAAAACACTAGGTCGAAAACCAATATTAAACGAGGATCAAGAAACTGATCTTGTGAAGAGAATAGTCAGGTTTGCTGAAATAGGATTGCCTGTAACACCACATACACTTCATCGACTGATCTACAAATTCGTCGAGCTACATAATATCAAACACAATTTTAACAAAAGCGTCAAACTAGCTGGTAAGGACTGGCTTAGGCCGTTCATGAAAAGACATCCGGAGCTATCCAAAAGAAAAGCTCAGTTCATGAACGCAGCTAGAGCTCAAAAGCTCAACAAATTTATAGTGGATGATCATTTTGAAAAATTGAACGAAATCTATGACAGACTGGACTTGAAAAATCATCCAGAATGGATTTACAACATGGATGAAAAAGGTTGCCGCCTCACCATCCATCATCAACAAACAGTTCTGGCGCTAAAAGGGGCTAAGAGGATACATTTACAATCCTCTGAACACGCAGAAAGCGTCACCATCGCAGGATGTGTTAAAGCTTCAGGTACGGCCATACCACCAACGATAATTTTCAAAGGTAAACGTTTAAAGCCAGAACTATTCGACAACTTGTCGCCAGGAACATTAGTAGAAAAATCAGCAAAGGGGTACATGACTAATGATCttttcaaagaatttttgaagtatcTGGGTAGATTCAAAAGTACCGGGACATGTCTTTTGATATTCGATGGGGCAGCCTGTCATTTAGACCTGTCCATGGTGGAAGTTGCTCATTCATTAGACATTGCACTGCTTACCGTCTAA
- Protein Sequence
- MPPKRALWSEDDLISAVRAVERGTLSTYKAAERYKIPRRTIRNHLQSGSLQKTLGRKPILNEDQETDLVKRIVRFAEIGLPVTPHTLHRLIYKFVELHNIKHNFNKSVKLAGKDWLRPFMKRHPELSKRKAQFMNAARAQKLNKFIVDDHFEKLNEIYDRLDLKNHPEWIYNMDEKGCRLTIHHQQTVLALKGAKRIHLQSSEHAESVTIAGCVKASGTAIPPTIIFKGKRLKPELFDNLSPGTLVEKSAKGYMTNDLFKEFLKYLGRFKSTGTCLLIFDGAACHLDLSMVEVAHSLDIALLTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00932465;
- 90% Identity
- iTF_00931196;
- 80% Identity
- -