Basic Information

Insect: Lygus lineolaris
Gene Symbol: stc
Assembly: GCA_030264115.1
Location: JAEMON010000014.1:12672570-12689766[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 1.6 2.5e+04 -3.8 1.6 15 19 468 472 467 472 0.81

2 11 0.0059 92 4.0 21.9 4 18 515 529 501 530 0.91

3 11 0.69 1.1e+04 -2.6 0.5 6 10 556 560 555 560 0.92

4 11 1.3e-08 0.0002 22.1 15.7 1 18 566 583 566 584 0.98

5 11 1.8 2.9e+04 -4.0 3.0 8 13 589 594 588 595 0.80

6 11 0.00043 6.7 7.6 21.9 1 19 629 647 629 647 0.99

7 11 6.7e-09 0.00011 23.0 12.7 1 18 688 709 688 710 0.88

8 11 1.9 2.9e+04 -4.0 2.2 5 10 739 744 739 744 0.91

9 11 0.0086 1.3e+02 3.5 9.7 1 11 750 760 750 761 0.96

10 11 0.97 1.5e+04 -3.1 0.6 4 10 765 771 764 771 0.86

11 11 3.9e-09 6e-05 23.7 14.4 1 18 777 794 777 795 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	1.6	2.5e+04	-3.8	1.6	15	19	468	472	467	472	0.81
2	11	0.0059	92	4.0	21.9	4	18	515	529	501	530	0.91
3	11	0.69	1.1e+04	-2.6	0.5	6	10	556	560	555	560	0.92
4	11	1.3e-08	0.0002	22.1	15.7	1	18	566	583	566	584	0.98
5	11	1.8	2.9e+04	-4.0	3.0	8	13	589	594	588	595	0.80
6	11	0.00043	6.7	7.6	21.9	1	19	629	647	629	647	0.99
7	11	6.7e-09	0.00011	23.0	12.7	1	18	688	709	688	710	0.88
8	11	1.9	2.9e+04	-4.0	2.2	5	10	739	744	739	744	0.91
9	11	0.0086	1.3e+02	3.5	9.7	1	11	750	760	750	761	0.96
10	11	0.97	1.5e+04	-3.1	0.6	4	10	765	771	764	771	0.86
11	11	3.9e-09	6e-05	23.7	14.4	1	18	777	794	777	795	0.97

Sequence Information

Coding Sequence: ATGGCTTCCAATTGGGACTGGATGAACAACGGGGGTTCGTCCTACCAGCAGCGTGGGAGGGACATCTGGTCGAACGGGGCTGTGTACTATCCACAGCCCACGACCTCTGGTGGCACAACCTACTACGGGCCTCCTCCTCACTCGGCCGACTGGTCGCCAAATCAGCCTAACCATCGAAACCAGTCGCAAGGAAACGGAGGTGGATCTGGACGGTCGCGGAATGCTGAAGAGTTTTTCGACTTGTTCCGAAGTGGTGGTTCTCAGCGAGGCGGAGCAAACGACCAGTCTCTACGACCTGACTACGTTGGCGGGTTTGGTGGGATCAGCTACCCTGCAACTGACTATGGCTACCAGGACTCCTACGTTCCCACAATGGTTTACAACTCCACCCATCCCAACAACAATCCTGGCGCAGCAGAATGGAGCAACGGCCGAGATGGAGGGGCGCCTTCAACTTCAAGGGGTCCAGTGCCCGACGAGACAATTGCGGTTGGTGGTCCCACCACGCAAACGTTTGGCAAAGCTCCGGGAGGTCCTTTGGGTACTTTGGGTTCAGGAACTCACCCTCGTCAGAGTAACAAAGAGAAAGCGAGCACCCACGGAGGGTCAACCCTGAACTCCAACTATGGTCGGAACAATAGTGCCAGCAATGGCGCCAAAAAAGGGTCAGATCGTCTTTACAGACAACCTGGACGACAAAATCGATCGTCGAATGGAGGTGGTACTGTTTTCTACAACCAAGGAGGGGGTGCTGTGAATGGGTTTCCGTCTAGCGACAGAGTTGATTCTCGCCGAGGTGGCAAAGGAGGCATCAACGGTGGGTCAATGGGAGGCGTTAAAGAGACCTGGGAGGCTAAAAGCCTGGGAAGACAACAGCTGCTGAGCGAAGCTGCAGCGATTCTACGAGGCAAAACGCCCGGAACTGCAGGCATGATGGATCGCAAACCGACTGACTTGAGCTGCGAAGGGGCTGCCAGTGAAGGGCCGGACGAGTCGAGAAGTACGAAGAACTCGCTCTCCAACAACAAATCGTCTCCTTCCTCCTACAATAGCTATGGTGGCAGCACTGGTGGAAGGCGTAACGGGAGTGGATTCCAGAAACAGAGGGACTCTTGGAAATCTAGCAATAGAGAAGAATGGAAAAATCGTAACAGCAATAAAGGTATGACTCCAATCTGGCTTATCTTAGCTGGTGATGACAAAGTGACAGCTGATCAAAGGGAGCGTCTGACGGAGCAGCTGTACCGGGGCACGTTGGAGTGTTTGGTTTGCTACGACAGGATCAGGCAGGCCGAACGCGTCTGGTCTTGTACCAACTGTCACCACGTGCTTCACCTTGGGTGCATCGTCAAGTGGGTCAACTCGTCCACCGAAGCCACTGGAGGGGagAGTGGATGGCGCTGCCCAGCTTGCCAGAATGTCACGCAGAACATCCCTACTGAATATAGATGTATGTGTGGAAAGGTCAACGACCCACAGTGGGTACGTGGGGATACACCGCATTGCTGTGGTCAGGTCTGCGGGAAGAGAAAGGACTGTCCTCACGGATGCACGCTCCTCTGCCACCCGGGGGCTTGTCCACCATGTTGCGCCAACGTGGAGCGCTCTTGCGGCTGCGGTCGTACTTCGCGGATCGTCATCTGTTCGTCGTCGGTGACGTTCGACTGCGAGGACGTCTGTGGGCGAGCGCTCAACTGCGGGCTGCATCCCTGTACCTCCGTATGCCATCAAGGCCCTTGTCCTCCCTGCGACAAATCCATTCACCAAACGTGCCACTGTGGTCGAACTGACCGAGATCTGACTTGCGACGGACACACCGTCCCACCGGAGATGGGAGGTCCCACGTCGTACTCCTGCGGCTCCCGCTGCCCCAACAACCTCTCCTGCGGGAAGCACCCTTGCCACATGACCTGCCATCCCCCGCCCTGCCCTCCCTGCCCCTTGTCTCCGTCCGTCCTTGTCAAGTGCCAATGTGGGAAGGAAGATGTCCCGTCTGGGTCGAGGTCCTCTTGTGAAGACCCAGTCGTCCTCTGTGGGTCTGTCTGTGACAAAGAGTTGAACTGTGGCCAATCTGAGGCTCGTCATCGTTGCAAAGCTAAATGTCACGAGGGGCCTTGTCCACCCTGCGACGGCGTTACTTCCGTTTTGTGTCGGTGTCACGCGATGGCCAAAGACATCGACTGCAAAGACCTAACCGGGAACCCTGAAGACACCAAGTGTCAGAAGAGGTGCACcaagAAACGCAATTGTGGGAAACACAAGTGCAACCAACAGTGTTGTATTGAAGTGGAGCACATTTGTCCCCTGGTGTGCAATAAGACTTTGAGCTGTGGTAAACATAAGTGCGAACGCTTGTGTCACAAAGGCCATTGCCCCATCTGTCTTGCGGCCACCTGCACGGAATCCGTGGCAAGCAGTGCGGGGCCGAGGAAGCCCCGGCCCCGCCCGTGCCCAACCCACCACGGTGGCGTCCCGAAACCGAAACACGCCACCACCTTACAGGCACTGAACTTGAAACGGCCCAGAGAACTTAAATCCACCGGCAAGCCACCCCCAAGCCCACACACCCACAAGCGAGCAACATCCATACAATAA
Protein Sequence: MASNWDWMNNGGSSYQQRGRDIWSNGAVYYPQPTTSGGTTYYGPPPHSADWSPNQPNHRNQSQGNGGGSGRSRNAEEFFDLFRSGGSQRGGANDQSLRPDYVGGFGGISYPATDYGYQDSYVPTMVYNSTHPNNNPGAAEWSNGRDGGAPSTSRGPVPDETIAVGGPTTQTFGKAPGGPLGTLGSGTHPRQSNKEKASTHGGSTLNSNYGRNNSASNGAKKGSDRLYRQPGRQNRSSNGGGTVFYNQGGGAVNGFPSSDRVDSRRGGKGGINGGSMGGVKETWEAKSLGRQQLLSEAAAILRGKTPGTAGMMDRKPTDLSCEGAASEGPDESRSTKNSLSNNKSSPSSYNSYGGSTGGRRNGSGFQKQRDSWKSSNREEWKNRNSNKGMTPIWLILAGDDKVTADQRERLTEQLYRGTLECLVCYDRIRQAERVWSCTNCHHVLHLGCIVKWVNSSTEATGGESGWRCPACQNVTQNIPTEYRCMCGKVNDPQWVRGDTPHCCGQVCGKRKDCPHGCTLLCHPGACPPCCANVERSCGCGRTSRIVICSSSVTFDCEDVCGRALNCGLHPCTSVCHQGPCPPCDKSIHQTCHCGRTDRDLTCDGHTVPPEMGGPTSYSCGSRCPNNLSCGKHPCHMTCHPPPCPPCPLSPSVLVKCQCGKEDVPSGSRSSCEDPVVLCGSVCDKELNCGQSEARHRCKAKCHEGPCPPCDGVTSVLCRCHAMAKDIDCKDLTGNPEDTKCQKRCTKKRNCGKHKCNQQCCIEVEHICPLVCNKTLSCGKHKCERLCHKGHCPICLAATCTESVASSAGPRKPRPRPCPTHHGGVPKPKHATTLQALNLKRPRELKSTGKPPPSPHTHKRATSIQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -